Information report for SlCHR1
Gene Details
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Functional Descriptions
- Transgenic tomato plants (cv. Micro-Tom) that constitutively overexpress the coding sequence of SlCHR1 show reduced growth in all developmental stages of tomato.
- Overexpression of cSlCHR1 in Arabidopsis does not affect growth and development.
- Constitutive expression of the tomato cSlCHR1 gene has no significant impact on vegetative growth and development of Arabidopsis plants and also does not seem to affect the response of Arabidopsis to adverse environmental conditions.
- Overexpression of cSlCHR1 in tomato results in considerably compacter growth.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 101248711
- UniProt accessions: A0A3Q7EH45
- AlphaFoldDB: A0A3Q7EH45
- EnsemblPlants: Solyc01g079690.3.1
- Gramene: Solyc01g079690.3.1
- KEGG: sly:101248711
- GO: GO:0000785 , GO:0003677 , GO:0003682 , GO:0004386 , GO:0005524 , GO:0005634 , GO:0016787 , GO:0042393 , GO:0045944 , GO:0140750
- OMA: DYFRMAH
- InterPro: IPR000330 , IPR001650 , IPR014001 , IPR027417 , IPR029295 , IPR038718 , IPR049730
- PANTHER: PTHR10799
- SUPFAM: SSF52540
- PROSITE: PS51192 , PS51194
- Gene3D: 3.40.50.10810 , 3.40.50.300
- OrthoDB: A0A3Q7EH45
- Pfam: PF00176 , PF00271 , PF14619
- SMR: A0A3Q7EH45
- CDD: cd18793
- STRING: 4081.A0A3Q7EH45
Sequences
cDNA Sequence
- >Solyc01g079690.4.1
TGTTGGTTAATTTTAAGTTTTATGTACCCCCCACCCCTAGTAATATTTGCACCGAATTTAAATAATAGGATTATCTTGCTCACTTGTAGAGACTTGCCAACCAGCAGAGGTGAGGACTTGCAATCGAAGTGCTTGCTTGAACTTTATGAATTAAAGTTAGCAGATTTACAACAAAAAGTTCGGTCTGAAGTGAGTTCTGAATATTGGCTTCGCCTGCATTGCGCTAATCCTGACAAGCAATTGTTTGACTGGGGGATGACACGATTGCGACGCCCTGTATATGGTATAGGAGATGCCTTTGCTGTTGAATCTGATGATCCATTGAGGAAGAAGCGTGATGCGCAGAGGTTGTCAAGAATAGAGGAAGAGGAAAGAAACCGCGTGGAAACTACAAAAAGGAAGTTCTTTGCGGATGTACTCAATGCAGCACGTGAACTCCAATTACAAGTACAGGCTGTTCAGAAGCGGCGGAAACAGAGGAATGATGGTGTTCAGGCTTGGCATGGAAGGCAAAGGCAACGGGCTACTCGTGCTGAGAAACTGAGGTTACAAGCACTGAAAGCTGATGATCAAGAAGCTTACATGAAGATGGTGGAGGAAAGCAAGAACGAAAGGTTGACAATGCTTCTAGGGAAAACAAATGACCTCCTGGGTCGTTTGGGAGCTGCTGTTCAACGGCAGAAAGATGCTGATCATGATGGCCTTGAATCTTTGGAAGGTTCAGATGCTGAAATGGCTGCTACTAAGACTGATACTCCTGGGCAGTCGCTTCCTGAGGAAGAAGAGGATGTAATTGATGATGAGTCCACTCATGATGTGAAGACTAATGACTTACTTGAAGGTCAAAGGAAGTACAATTCAGCTGTACATTCGATCCAGGAGAAGGTTACGGAGCAACCAGCTATGCTTCAGGGTGGAGAACTGAGATCTTACCAGATAGAAGGGCTTCAATGGATGTTGTCTTTGTTTAATAACAACTTAAATGGAATTTTAGCGGATGAAATGGGACTCGGGAAAACGATCCAGACAATTGCTTTAATTGCTTACCTCTTGGAAAACAAGGGTGTACGTGGTCCCCACTTGATTGTGGCTCCAAAAGCTGTACTACCTAATTGGATTACGGAATTCTCAACATGGGCTCCTAGCATTGTTGCTATTCTTTACGATGGTCGTTTGGAAGAAAGGAAGGCACTGAGGGAGGAGTTGACAGGAGAGGGGAGGTTCAGTGTGTTGATCACACATTATGATCTTATTATGAGAGACAAAGCATTTCTGAAGAAAATTCATTGGCACTATCTGATAATTGATGAAGGCCACAGATTGAAAAATCACGAATGTGCTCTTGCACGGACACTTGTGTCAGGTTATAGGATTCGACGAAGACTCCTATTGACAGGTACCCCAATCCAAAACAGCTTACAGGAGTTGTGGTCTCTTCTCAATTTTCTTCTTCCAAACATCTTTAATTCAGTGGAGAATTTTGAGGAGTGGTTTAATGCCCCCTTCGCCGATAAGTGTGATGTCTCTCTAACTGATGAAGAGGAACTATTGATTATTCGCCGGTTGCACCATGTGATAAGGCCATTTATATTGAGGAGGAAGAAGGATGAAGTGGAGAAATTTCTTCCTGGGAAAACACAAGTTGTTCTTAAATGTGATATGTCTGCATGGCAAAAAGTATACTACCAGCAGGTCACAGATGTTGGGAGGGTTGGATTGGATTCTGGAACTGGGAGGTCTAAGAGTCTGCAGAATCTCTCCATGCAACTTAGGAAATGTTGTAATCACCCTTACCTATTTGTGGCCGAGTATAATATTTATCGAAAGGAGGAGATAGTGAGAGCATCTGGAAAATTTGAGCTTCTTGATCGTTTACTACCCAAACTTCGCAGAGCTGGGCACAGGGTCCTTCTCTTCTCACAAATGACCCGCCTCATGGACATTCTTGAAGTCTATCTGCAGGTTCATGACTTCAAGTATCTTAGACTTGATGGCTCAACCAAAACAGAGGAGCGAGGGACTTTGCTAAAGCAATTTAATGCTCCTGACTCTCCTTACTTTATGTTTCTTTTGAGTACTCGTGCTGGAGGACTCGGTCTAAATCTGCAAACAGCAGATACTGTGATAATTTTTGATAGCGACTGGAACCCTCAAATGGACCAGCAGGCAGAAGATAGGGCACATCGAATTGGGCAAAAAAAAGAAGTTAGGGTTTTTGTGTTGGTCAGTGTTGGATCAATTGAAGAGGTCATTTTGGAGCGTGCAAAACAGAAGATGGGTATTGATGCTAAGGTCATCCAGGCTGGCTTGTTCAATACAACATCTACAGCTCAAGAAAGAAGGGATATGTTGGAAGAGATCATGCGTAAAGGTACAAGCACTCTTGGAACAGATGTGCCAAGCGAAAGAGAGATTAATCGTCTTGCTGCCCGCTCCGATGAGGAATTTTGGCTGTTTGAGAAAATGGACGAGGAGAGAAGACAAAAAGAGCGTTACAGATCTCGTCTCATGGAAGATCATGAGGTACCAGATTGGGCTTATGCTACACCTGACTCTAAGGAAAAGGGAAAAGGATTCTTATACGAAAGTGCTAATATCACTGGAAAGCGACGTAGAAAGGAAGTGGTTTATGCCGATACTTTAAGTGATGTACAGTGGATGAAGGCTGTGGAGAACGGAGATGATTTCTTTACGCAATCAAGTAAAGGCAGGAACAGGGACCATCAGTCAGTCTCAAATGGTGAGTTGCCTAGTGGCAATGCTGATTCTGAGAGGACTGGACATGACTTGAAGCCCGATACTGTGTCTGTGGCGAGTGAGGCAACAAGTGAAGATACCTATGGAAGAACTCCCAAAAGGTTCAAATCCGAGAGTGCAAGTTCCATGAGAAATGATTATCACGATTTGACTGGCCATAGTGTGGACGGTTTATCGTGGAAGGCCCACAGGAGGAGGAGATCAAGCTTAATATCCTGAGGTTGCCCTTGTAAAACCTAGGAATTAATTTGGCCAGTGAAGTCATTAGTGGACATAGGGGAGCATTTAAGATCTCTAACTATGGTTCTAGTCGTCTGTTTGACTCAGTGTCTTACATGTATATTAGCATCTAATACCTTTTAGGTTTTGCATTTGCTACTAGTTAACTGTGCAGTAGTGGAAAAATTGGAGATGTACCATTAGCTTTTTGCTACAATTCTTAATTATTCTAATTTGGAGTCAATGGTGGATTAAGTTTCAGTAGCTTGGCTGCCATGTCCAGCATATTTTCAAGT
CDS Sequence
- >Solyc01g079690.4.1
TGTTGGTTAATTTTAAGTTTTATGTACCCCCCACCCCTAGTAATATTTGCACCGAATTTAAATAATAGGATTATCTTGCTCACTTGTAGAGACTTGCCAACCAGCAGAGGTGAGGACTTGCAATCGAAGTGCTTGCTTGAACTTTATGAATTAAAGTTAGCAGATTTACAACAAAAAGTTCGGTCTGAAGTGAGTTCTGAATATTGGCTTCGCCTGCATTGCGCTAATCCTGACAAGCAATTGTTTGACTGGGGGATGACACGATTGCGACGCCCTGTATATGGTATAGGAGATGCCTTTGCTGTTGAATCTGATGATCCATTGAGGAAGAAGCGTGATGCGCAGAGGTTGTCAAGAATAGAGGAAGAGGAAAGAAACCGCGTGGAAACTACAAAAAGGAAGTTCTTTGCGGATGTACTCAATGCAGCACGTGAACTCCAATTACAAGTACAGGCTGTTCAGAAGCGGCGGAAACAGAGGAATGATGGTGTTCAGGCTTGGCATGGAAGGCAAAGGCAACGGGCTACTCGTGCTGAGAAACTGAGGTTACAAGCACTGAAAGCTGATGATCAAGAAGCTTACATGAAGATGGTGGAGGAAAGCAAGAACGAAAGGTTGACAATGCTTCTAGGGAAAACAAATGACCTCCTGGGTCGTTTGGGAGCTGCTGTTCAACGGCAGAAAGATGCTGATCATGATGGCCTTGAATCTTTGGAAGGTTCAGATGCTGAAATGGCTGCTACTAAGACTGATACTCCTGGGCAGTCGCTTCCTGAGGAAGAAGAGGATGTAATTGATGATGAGTCCACTCATGATGTGAAGACTAATGACTTACTTGAAGGTCAAAGGAAGTACAATTCAGCTGTACATTCGATCCAGGAGAAGGTTACGGAGCAACCAGCTATGCTTCAGGGTGGAGAACTGAGATCTTACCAGATAGAAGGGCTTCAATGGATGTTGTCTTTGTTTAATAACAACTTAAATGGAATTTTAGCGGATGAAATGGGACTCGGGAAAACGATCCAGACAATTGCTTTAATTGCTTACCTCTTGGAAAACAAGGGTGTACGTGGTCCCCACTTGATTGTGGCTCCAAAAGCTGTACTACCTAATTGGATTACGGAATTCTCAACATGGGCTCCTAGCATTGTTGCTATTCTTTACGATGGTCGTTTGGAAGAAAGGAAGGCACTGAGGGAGGAGTTGACAGGAGAGGGGAGGTTCAGTGTGTTGATCACACATTATGATCTTATTATGAGAGACAAAGCATTTCTGAAGAAAATTCATTGGCACTATCTGATAATTGATGAAGGCCACAGATTGAAAAATCACGAATGTGCTCTTGCACGGACACTTGTGTCAGGTTATAGGATTCGACGAAGACTCCTATTGACAGGTACCCCAATCCAAAACAGCTTACAGGAGTTGTGGTCTCTTCTCAATTTTCTTCTTCCAAACATCTTTAATTCAGTGGAGAATTTTGAGGAGTGGTTTAATGCCCCCTTCGCCGATAAGTGTGATGTCTCTCTAACTGATGAAGAGGAACTATTGATTATTCGCCGGTTGCACCATGTGATAAGGCCATTTATATTGAGGAGGAAGAAGGATGAAGTGGAGAAATTTCTTCCTGGGAAAACACAAGTTGTTCTTAAATGTGATATGTCTGCATGGCAAAAAGTATACTACCAGCAGGTCACAGATGTTGGGAGGGTTGGATTGGATTCTGGAACTGGGAGGTCTAAGAGTCTGCAGAATCTCTCCATGCAACTTAGGAAATGTTGTAATCACCCTTACCTATTTGTGGCCGAGTATAATATTTATCGAAAGGAGGAGATAGTGAGAGCATCTGGAAAATTTGAGCTTCTTGATCGTTTACTACCCAAACTTCGCAGAGCTGGGCACAGGGTCCTTCTCTTCTCACAAATGACCCGCCTCATGGACATTCTTGAAGTCTATCTGCAGGTTCATGACTTCAAGTATCTTAGACTTGATGGCTCAACCAAAACAGAGGAGCGAGGGACTTTGCTAAAGCAATTTAATGCTCCTGACTCTCCTTACTTTATGTTTCTTTTGAGTACTCGTGCTGGAGGACTCGGTCTAAATCTGCAAACAGCAGATACTGTGATAATTTTTGATAGCGACTGGAACCCTCAAATGGACCAGCAGGCAGAAGATAGGGCACATCGAATTGGGCAAAAAAAAGAAGTTAGGGTTTTTGTGTTGGTCAGTGTTGGATCAATTGAAGAGGTCATTTTGGAGCGTGCAAAACAGAAGATGGGTATTGATGCTAAGGTCATCCAGGCTGGCTTGTTCAATACAACATCTACAGCTCAAGAAAGAAGGGATATGTTGGAAGAGATCATGCGTAAAGGTACAAGCACTCTTGGAACAGATGTGCCAAGCGAAAGAGAGATTAATCGTCTTGCTGCCCGCTCCGATGAGGAATTTTGGCTGTTTGAGAAAATGGACGAGGAGAGAAGACAAAAAGAGCGTTACAGATCTCGTCTCATGGAAGATCATGAGGTACCAGATTGGGCTTATGCTACACCTGACTCTAAGGAAAAGGGAAAAGGATTCTTATACGAAAGTGCTAATATCACTGGAAAGCGACGTAGAAAGGAAGTGGTTTATGCCGATACTTTAAGTGATGTACAGTGGATGAAGGCTGTGGAGAACGGAGATGATTTCTTTACGCAATCAAGTAAAGGCAGGAACAGGGACCATCAGTCAGTCTCAAATGGTGAGTTGCCTAGTGGCAATGCTGATTCTGAGAGGACTGGACATGACTTGAAGCCCGATACTGTGTCTGTGGCGAGTGAGGCAACAAGTGAAGATACCTATGGAAGAACTCCCAAAAGGTTCAAATCCGAGAGTGCAAGTTCCATGAGAAATGATTATCACGATTTGACTGGCCATAGTGTGGACGGTTTATCGTGGAAGGCCCACAGGAGGAGGAGATCAAGCTTAATATCCTGA
Protein Sequence
- >Solyc01g079690.4.1
CWLILSFMYPPPLVIFAPNLNNRIILLTCRDLPTSRGEDLQSKCLLELYELKLADLQQKVRSEVSSEYWLRLHCANPDKQLFDWGMTRLRRPVYGIGDAFAVESDDPLRKKRDAQRLSRIEEEERNRVETTKRKFFADVLNAARELQLQVQAVQKRRKQRNDGVQAWHGRQRQRATRAEKLRLQALKADDQEAYMKMVEESKNERLTMLLGKTNDLLGRLGAAVQRQKDADHDGLESLEGSDAEMAATKTDTPGQSLPEEEEDVIDDESTHDVKTNDLLEGQRKYNSAVHSIQEKVTEQPAMLQGGELRSYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLENKGVRGPHLIVAPKAVLPNWITEFSTWAPSIVAILYDGRLEERKALREELTGEGRFSVLITHYDLIMRDKAFLKKIHWHYLIIDEGHRLKNHECALARTLVSGYRIRRRLLLTGTPIQNSLQELWSLLNFLLPNIFNSVENFEEWFNAPFADKCDVSLTDEEELLIIRRLHHVIRPFILRRKKDEVEKFLPGKTQVVLKCDMSAWQKVYYQQVTDVGRVGLDSGTGRSKSLQNLSMQLRKCCNHPYLFVAEYNIYRKEEIVRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDILEVYLQVHDFKYLRLDGSTKTEERGTLLKQFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQERRDMLEEIMRKGTSTLGTDVPSEREINRLAARSDEEFWLFEKMDEERRQKERYRSRLMEDHEVPDWAYATPDSKEKGKGFLYESANITGKRRRKEVVYADTLSDVQWMKAVENGDDFFTQSSKGRNRDHQSVSNGELPSGNADSERTGHDLKPDTVSVASEATSEDTYGRTPKRFKSESASSMRNDYHDLTGHSVDGLSWKAHRRRRSSLIS*