Information report for SlSPL13
Gene Details
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Functional Descriptions
- miR156a-targeted SBP-Box transcription factor SlSPL13 regulates inflorescence morphogenesis by directly activating SFT in tomato.
- SlSPL13 is a key factor in miR156a-regulated tomato plant development.
- miR156a-targeted SlSPL13 regulates inflorescence morphogenesis through the SFT/FT-AP1 pathway
- Genetic and biochemical evidence indicate that SPL13 controls inflorescence development by positively regulating the expression of the tomato inflorescence-associated gene SINGLE FLOWER TRUSS (SFT) by directly binding to its promoter region.
- The transcription factor SPL13 mediates strigolactone suppression of shoot branching by inhibiting cytokinin synthesis in Solanum lycopersicum.
- The results demonstrate that SPL13 acts downstream of SL to suppress lateral bud growth by inhibiting CK synthesis in tomato. Tuning the expression of SPL13 is a potential approach for decreasing the number of lateral shoots in tomato.
Functional Keywords
Literature and News
- miR156a-targeted SBP-Box transcription factor SlSPL13 regulates inflorescence morphogenesis by directly activating SFT in tomato. DOI: 10.1111/pbi.13331 ; PMID: 31916387
- The transcription factor SPL13 mediates strigolactone suppression of shoot branching by inhibiting cytokinin synthesis in Solanum lycopersicum. DOI: 10.1093/jxb/erad303 ; PMID: 37504507
Gene Resources
- NCBI ID: 101251286
- UniProt accessions: A0A3Q7HAE1
- AlphaFoldDB: A0A3Q7HAE1
- EnsemblPlants: Solyc05g015840.3.1
- Gramene: Solyc05g015840.3.1
- KEGG: sly:101251286
- GO: GO:0003677 , GO:0005634 , GO:0008270
- OMA: SECREYH
- InterPro: IPR004333 , IPR036893 , IPR044817
- PANTHER: PTHR31251 , PTHR31251:SF208
- SUPFAM: SSF103612
- PROSITE: PS51141
- Gene3D: 4.10.1100.10
- OrthoDB: A0A3Q7HAE1
- Pfam: PF03110
- SMR: A0A3Q7HAE1
- STRING: 4081.A0A3Q7HAE1
Sequences
cDNA Sequence
- >Solyc05g015840.3.1
TGGCTGTTTGTCTATGATGCCTATTGGCTATTAACCTAAAAAGTGATGCAATCTTTTCTCCCTTTCCAACTCTCACATAGAAGTTCAATTCCTTGAATCCTCACTCTTTTCAAGCTCGCTGAGTATATTTCATCCCTACCCCTATACTAGTGGTGGATGGGATGAGCATAAAAAGGAGGTGATTAAGGTCTTGGAGCGGACAAAAGCTAAATTGTAACTATACTTTCACATTTTGTGACGTTGTTAACTCAGGTCAAGAATTTAGAGGCAAAAATTGAATTGTGTGATGGAATCATCATCATCGTCATCAAAAAGGGCCAAGGCACCAGGGAATATAGCTCATTGCTTGGTTGATGGGTGTAATGCAGACCTAAGTGAATGCAGAGAGTATCATCGCCGGCATAAAGTTTGTGAGGTGCATTCAAAGACTGCCAAAGTCACAATTGCAGGTCGAGACCAACGCTTCTGTCAACAATGTAGCAGGTTTCATTCATTGGTAGAATTTGATGATGGAAAGAGAAGCTGTCGGAAACGTCTTGATGGGCATAACAGGCGTCGAAGGAAGCCCCAGCCAGATTCTATGGCAAAAAATTCTGGAATACTTTTTGGCCAACAAGGAACGAAACTCCTGTCATTTAGCAGTCAACAAATATTTCCAAGTGCAGTTGTGAGCTCTGCATGGGCTGGTGTTGTCAAAACGGACAGCGATATGGTATTATACAACAACCAATCTCATATGAATGGTATGGACAGTCAAAACTCGTTCCCTGACTCTTCGGGTCATAGCTATAAAGGAGGAAGCCAATTCCAGTTCATGCAAGGCAGTGATCGTAGTCTGACTGAAGCGCCACTTTTTGAACATCCCACTTCTGCAGCAGGAATTTCTAGCAGCGGACAAAAGATCTTCTCGAGTGGATTAAATGATATTGTTGATTCTGATCGTGCTCTCTCTCTTCTGTCATCAGCACCTGCTGTAACTAGGGAGATTGGTTTGAGTCACATGGTGCAGCAGCCTGCCTCTATCCCGCGTTCCCAGTCACATGGCCTGCAGTATGATGGTCTAAGCCATTTCCCTTTTGCTCAAGATTTCAATAGCAAACCTCAAGATTCACATGTCAGCAACAGCAGCAGCCCTCTCCATTTCCATGATATGTTGCAAAATGCACAAGATGAATCATCTACAATCCCTGCCTCTCAGCAAACACTAGCCTTTATGTGGGACTAAACTTTTAGCCTGCCTTGCTTTCTGCGGATATCATCAAGCAAATTCCGGTGAATCTTCAATCCATCCAACCAAATGCTATTCCATTTCAGAATGTTAAGCTTCCAATTAGCAAACACTCCACATGATTCGAATGTTTGTGTAATGTATCACTTAACTTTTCTATATTTTCCCTTCATTATGACGACGATTCTCTTCTTTGTTCTCTGAATTTTCCATCCCATCTCCAAAATGTATTAAAAAATCTCTTAATTTAATTATGAAGTATATTCCAGCTTTCTGGG
CDS Sequence
- >Solyc05g015840.3.1
ATGGAATCATCATCATCGTCATCAAAAAGGGCCAAGGCACCAGGGAATATAGCTCATTGCTTGGTTGATGGGTGTAATGCAGACCTAAGTGAATGCAGAGAGTATCATCGCCGGCATAAAGTTTGTGAGGTGCATTCAAAGACTGCCAAAGTCACAATTGCAGGTCGAGACCAACGCTTCTGTCAACAATGTAGCAGGTTTCATTCATTGGTAGAATTTGATGATGGAAAGAGAAGCTGTCGGAAACGTCTTGATGGGCATAACAGGCGTCGAAGGAAGCCCCAGCCAGATTCTATGGCAAAAAATTCTGGAATACTTTTTGGCCAACAAGGAACGAAACTCCTGTCATTTAGCAGTCAACAAATATTTCCAAGTGCAGTTGTGAGCTCTGCATGGGCTGGTGTTGTCAAAACGGACAGCGATATGGTATTATACAACAACCAATCTCATATGAATGGTATGGACAGTCAAAACTCGTTCCCTGACTCTTCGGGTCATAGCTATAAAGGAGGAAGCCAATTCCAGTTCATGCAAGGCAGTGATCGTAGTCTGACTGAAGCGCCACTTTTTGAACATCCCACTTCTGCAGCAGGAATTTCTAGCAGCGGACAAAAGATCTTCTCGAGTGGATTAAATGATATTGTTGATTCTGATCGTGCTCTCTCTCTTCTGTCATCAGCACCTGCTGTAACTAGGGAGATTGGTTTGAGTCACATGGTGCAGCAGCCTGCCTCTATCCCGCGTTCCCAGTCACATGGCCTGCAGTATGATGGTCTAAGCCATTTCCCTTTTGCTCAAGATTTCAATAGCAAACCTCAAGATTCACATGTCAGCAACAGCAGCAGCCCTCTCCATTTCCATGATATGTTGCAAAATGCACAAGATGAATCATCTACAATCCCTGCCTCTCAGCAAACACTAGCCTTTATGTGGGACTAA
Protein Sequence
- >Solyc05g015840.3.1
MESSSSSSKRAKAPGNIAHCLVDGCNADLSECREYHRRHKVCEVHSKTAKVTIAGRDQRFCQQCSRFHSLVEFDDGKRSCRKRLDGHNRRRRKPQPDSMAKNSGILFGQQGTKLLSFSSQQIFPSAVVSSAWAGVVKTDSDMVLYNNQSHMNGMDSQNSFPDSSGHSYKGGSQFQFMQGSDRSLTEAPLFEHPTSAAGISSSGQKIFSSGLNDIVDSDRALSLLSSAPAVTREIGLSHMVQQPASIPRSQSHGLQYDGLSHFPFAQDFNSKPQDSHVSNSSSPLHFHDMLQNAQDESSTIPASQQTLAFMWD*