Gene Details:
- Gene ID: Solyc11g010660
- Gene Symbol: SlSGT1
- Gene Name: Suppressor-like protein
- Genome: Tomato Genome version SL4.0
- Species: Solanum lycopersicum
Functional Descriptions:
- Solyc11g010660, a homolog of SGT1 (suppressor of the G2 allele of skp1), was predicted as a target of SlymiR482e-3p and termed as SlSGT1.
- SlSGT1 was dramatically induced during Fol infection in the susceptible cultivar Moneymaker, meanwhile, the basal level of SlSGT1 was elevated in the SlylmiR482e-3p-KO mutant possibly resulting in the resistance to Fol.
- Considering all of the above results, we concluded that SlymiR482e-3p regulates SlSGT1 expression by chopping the intact mRNA.
Function-related keywords:
Literature:
- SlymiR482e-3p mediates tomato wilt disease by modulating ethylene response pathway. DOI: 10.1111/pbi.13439 ; PMID: 32621307
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >Solyc11g010660.2.1
ATGGCGGAGCAAGACCCTTACGCCAACATCTTCTCCCAGAAAAACTCCCGTCTAGCTGACGACACGGTATTCTTCTCCATATACCCAGACTTTACCTTAAACCCCACTTCTCCTCCAACCTCCATAACTTCTCAACTCCAATCCCTTCACCTCCAAATCCTCCAAAATCTCTCCCCTTTCACTTCCAATTACATATGGCAACACGAACCCTTCACCCTCACCCTTTCCCCCGGCCCCACCCCTCCCCATCTCTCCGGCAAACTCCGGTACGGGGACAACCTCGAAGACGAATGGTTCGTCGTATTCCTCCTTTTCGAAACCTCAAAACGCTTCCCTAGTGTGTCAATTCGTGTTTGGGATAGTGACGGGGAGTTCTTATTGATCGAAACTGCATTTTATCTCCCCCGTTGGGTTAACCCTGATACAGCAATGAACCGTGTTTTTATCAGAGGTGGGTTTCTTCATATTATCCCTAATTCGGTAATACCCACAACCCCATCAATCCACGAGGCGTTAAATTTGTTAAGGAATGTGAGTAGTACTAGAGCACCTGAAGGAGTGCAGCGTCAGTTAGAGAATAGGTTGAAGGAGTATCCCAATAGAGCGGAGAAGAATGTGCACAAGGTTAGGGTTAGGGTTCCCCTGTCAGTTGCAAAAGTGTTAAAGCATGAGCCTTGTTTGATTTCGCTTGCGGTGGAAGGATTTTACGATAGGGATATTGATACAATGAAGTTCGCGGCGGAGATGGAGAGGTTTTTGGGGAATGGGGGTAGTGGGGAGGAGCTGGTTCGAGTTTTGGTTACGATGTCTAGGGCAATGTATGCACAGTTGGTGCAGCAGACATTTCAGGCGCCGAAATGTTATCCGGCTTTGCCACCCAGGAGTGATGTGGGTGCTTATATGGAAGCTGAGCTGGGAATGAAGATTGCTTGTGGATTTGAGATGATTTATCAGTTGAAAAAGAGGCAGGGCATGGACGGAAAAGGGAGTACATGGGATGCGTTTAGGCTGAGTCTAGAGCGGAGTGGGTACTTCGAAGGGCTGTTACCAGGATCGAAGGAGTATAAAAGATTGATGAAGAATGCTGAGGAGTATTACAAGAATAGTTCACTGCATGCAAGAGAAAGTGCTACACTAAGTGCTCCAGTGCGAAGAATAGATGAGATCCTTGCCCTTCCTGATTCTGCTGATGACTTTAAGGATCAGGAGATACCGCCATCTGATGATGATTCATGGCTTTATGGTGGAGAGGATGAGCTAAATTCCGTTCTTCAAGAGAGGCAAAAGGAGATGGAACTTTACAATTCAAAAAGGAAACAGAAATCAAAAGAGCAGGATGGGCCCAGCAATCATTCTGATAATTTTGATCTAAAAGATATATCGAACTCTATGCAAGCATTTGTCACAAAAGTGGCCAGTTATGAAGGTGCAGAGGTTCCAGAGGACAGGAATGTAAAGGAAGTGGACTTTGATGTCGATCACTTTATGAAAGACCTGGAATCGTTTATGAGGGGTCAGGGCAATGAAGACATTGGCCGTGATGTTGATATTGAAGAAGGGTCATCATCAGATATGGAGTTCGATGAATCTGAAGATGAGAGTGATATTGCCGAGCCACATGATGATAATGATGAGGGAGGTGCTGCTTTCATGCATTCGTATTCGGACACTCTGAATGATGAACTGAAAGGCACCACACTAAGTAATACCTTTGTCCGCGCAAATGGAGAGTCTGAGTCCATAAAGAAAGATGAGGGAACATCTACTGCTGCAGAAAACATGGAAGAGGAGGATTTCAGTCCTGTAGATGTTGATTTCAATCTTGTAAAGAATTTCCTGGATTCGTTTTCTTCTCAAGATGGACTTCCAGGACCTGCTTCTAACTTGCTTGGACTTATGGGTCTACAGCTACCACCAGATGCTAGCAAAGGGAAATAACCATATTATACACAAACTTGTTTCCTCATTCTTCTTTTCCTTGCCTTTTTCTAAACGGCAATCTTTACAATACTATGTATTACGTATGTTTTAACTTCAAACGGAGAAAAAAGGAGGAGGTGGATTTATGTGGTATTTTTCATTTTTGACCATCAAATAATTTATATATTGATAAATTATGTAAAAAATATTATAAGTTGACGAAATTTATCATGACCAGGAAGTGAAGTAGTAGGTTTTGGTTG
CDS Sequence
- >Solyc11g010660.2.1
ATGGCGGAGCAAGACCCTTACGCCAACATCTTCTCCCAGAAAAACTCCCGTCTAGCTGACGACACGGTATTCTTCTCCATATACCCAGACTTTACCTTAAACCCCACTTCTCCTCCAACCTCCATAACTTCTCAACTCCAATCCCTTCACCTCCAAATCCTCCAAAATCTCTCCCCTTTCACTTCCAATTACATATGGCAACACGAACCCTTCACCCTCACCCTTTCCCCCGGCCCCACCCCTCCCCATCTCTCCGGCAAACTCCGGTACGGGGACAACCTCGAAGACGAATGGTTCGTCGTATTCCTCCTTTTCGAAACCTCAAAACGCTTCCCTAGTGTGTCAATTCGTGTTTGGGATAGTGACGGGGAGTTCTTATTGATCGAAACTGCATTTTATCTCCCCCGTTGGGTTAACCCTGATACAGCAATGAACCGTGTTTTTATCAGAGGTGGGTTTCTTCATATTATCCCTAATTCGGTAATACCCACAACCCCATCAATCCACGAGGCGTTAAATTTGTTAAGGAATGTGAGTAGTACTAGAGCACCTGAAGGAGTGCAGCGTCAGTTAGAGAATAGGTTGAAGGAGTATCCCAATAGAGCGGAGAAGAATGTGCACAAGGTTAGGGTTAGGGTTCCCCTGTCAGTTGCAAAAGTGTTAAAGCATGAGCCTTGTTTGATTTCGCTTGCGGTGGAAGGATTTTACGATAGGGATATTGATACAATGAAGTTCGCGGCGGAGATGGAGAGGTTTTTGGGGAATGGGGGTAGTGGGGAGGAGCTGGTTCGAGTTTTGGTTACGATGTCTAGGGCAATGTATGCACAGTTGGTGCAGCAGACATTTCAGGCGCCGAAATGTTATCCGGCTTTGCCACCCAGGAGTGATGTGGGTGCTTATATGGAAGCTGAGCTGGGAATGAAGATTGCTTGTGGATTTGAGATGATTTATCAGTTGAAAAAGAGGCAGGGCATGGACGGAAAAGGGAGTACATGGGATGCGTTTAGGCTGAGTCTAGAGCGGAGTGGGTACTTCGAAGGGCTGTTACCAGGATCGAAGGAGTATAAAAGATTGATGAAGAATGCTGAGGAGTATTACAAGAATAGTTCACTGCATGCAAGAGAAAGTGCTACACTAAGTGCTCCAGTGCGAAGAATAGATGAGATCCTTGCCCTTCCTGATTCTGCTGATGACTTTAAGGATCAGGAGATACCGCCATCTGATGATGATTCATGGCTTTATGGTGGAGAGGATGAGCTAAATTCCGTTCTTCAAGAGAGGCAAAAGGAGATGGAACTTTACAATTCAAAAAGGAAACAGAAATCAAAAGAGCAGGATGGGCCCAGCAATCATTCTGATAATTTTGATCTAAAAGATATATCGAACTCTATGCAAGCATTTGTCACAAAAGTGGCCAGTTATGAAGGTGCAGAGGTTCCAGAGGACAGGAATGTAAAGGAAGTGGACTTTGATGTCGATCACTTTATGAAAGACCTGGAATCGTTTATGAGGGGTCAGGGCAATGAAGACATTGGCCGTGATGTTGATATTGAAGAAGGGTCATCATCAGATATGGAGTTCGATGAATCTGAAGATGAGAGTGATATTGCCGAGCCACATGATGATAATGATGAGGGAGGTGCTGCTTTCATGCATTCGTATTCGGACACTCTGAATGATGAACTGAAAGGCACCACACTAAGTAATACCTTTGTCCGCGCAAATGGAGAGTCTGAGTCCATAAAGAAAGATGAGGGAACATCTACTGCTGCAGAAAACATGGAAGAGGAGGATTTCAGTCCTGTAGATGTTGATTTCAATCTTGTAAAGAATTTCCTGGATTCGTTTTCTTCTCAAGATGGACTTCCAGGACCTGCTTCTAACTTGCTTGGACTTATGGGTCTACAGCTACCACCAGATGCTAGCAAAGGGAAATAA
Protein Sequence
- >Solyc11g010660.2.1
MAEQDPYANIFSQKNSRLADDTVFFSIYPDFTLNPTSPPTSITSQLQSLHLQILQNLSPFTSNYIWQHEPFTLTLSPGPTPPHLSGKLRYGDNLEDEWFVVFLLFETSKRFPSVSIRVWDSDGEFLLIETAFYLPRWVNPDTAMNRVFIRGGFLHIIPNSVIPTTPSIHEALNLLRNVSSTRAPEGVQRQLENRLKEYPNRAEKNVHKVRVRVPLSVAKVLKHEPCLISLAVEGFYDRDIDTMKFAAEMERFLGNGGSGEELVRVLVTMSRAMYAQLVQQTFQAPKCYPALPPRSDVGAYMEAELGMKIACGFEMIYQLKKRQGMDGKGSTWDAFRLSLERSGYFEGLLPGSKEYKRLMKNAEEYYKNSSLHARESATLSAPVRRIDEILALPDSADDFKDQEIPPSDDDSWLYGGEDELNSVLQERQKEMELYNSKRKQKSKEQDGPSNHSDNFDLKDISNSMQAFVTKVASYEGAEVPEDRNVKEVDFDVDHFMKDLESFMRGQGNEDIGRDVDIEEGSSSDMEFDESEDESDIAEPHDDNDEGGAAFMHSYSDTLNDELKGTTLSNTFVRANGESESIKKDEGTSTAAENMEEEDFSPVDVDFNLVKNFLDSFSSQDGLPGPASNLLGLMGLQLPPDASKGK*