Information report for SlSGT1
Gene Details
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Functional Descriptions
- Solyc11g010660, a homolog of SGT1 (suppressor of the G2 allele of skp1), was predicted as a target of SlymiR482e-3p and termed as SlSGT1.
- SlSGT1 was dramatically induced during Fol infection in the susceptible cultivar Moneymaker, meanwhile, the basal level of SlSGT1 was elevated in the SlylmiR482e-3p-KO mutant possibly resulting in the resistance to Fol.
- Considering all of the above results, we concluded that SlymiR482e-3p regulates SlSGT1 expression by chopping the intact mRNA.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 101247681
- UniProt accessions: Q949K3
- EMBL: AF275345
- EnsemblPlants: Solyc11g010660.2.1
- Gramene: Solyc11g010660.2.1
- KEGG: sly:101247681
- GO: GO:0005634
- OMA: TKDYIWQ
- InterPro: IPR010770
- PANTHER: PTHR13060 , PTHR13060:SF0
- OrthoDB: Q949K3
- Pfam: PF07093
- STRING: 4081.Q949K3
- HOGENOM: CLU_006241_0_0_1
Sequences
cDNA Sequence
- >Solyc11g010660.2.1
ATGGCGGAGCAAGACCCTTACGCCAACATCTTCTCCCAGAAAAACTCCCGTCTAGCTGACGACACGGTATTCTTCTCCATATACCCAGACTTTACCTTAAACCCCACTTCTCCTCCAACCTCCATAACTTCTCAACTCCAATCCCTTCACCTCCAAATCCTCCAAAATCTCTCCCCTTTCACTTCCAATTACATATGGCAACACGAACCCTTCACCCTCACCCTTTCCCCCGGCCCCACCCCTCCCCATCTCTCCGGCAAACTCCGGTACGGGGACAACCTCGAAGACGAATGGTTCGTCGTATTCCTCCTTTTCGAAACCTCAAAACGCTTCCCTAGTGTGTCAATTCGTGTTTGGGATAGTGACGGGGAGTTCTTATTGATCGAAACTGCATTTTATCTCCCCCGTTGGGTTAACCCTGATACAGCAATGAACCGTGTTTTTATCAGAGGTGGGTTTCTTCATATTATCCCTAATTCGGTAATACCCACAACCCCATCAATCCACGAGGCGTTAAATTTGTTAAGGAATGTGAGTAGTACTAGAGCACCTGAAGGAGTGCAGCGTCAGTTAGAGAATAGGTTGAAGGAGTATCCCAATAGAGCGGAGAAGAATGTGCACAAGGTTAGGGTTAGGGTTCCCCTGTCAGTTGCAAAAGTGTTAAAGCATGAGCCTTGTTTGATTTCGCTTGCGGTGGAAGGATTTTACGATAGGGATATTGATACAATGAAGTTCGCGGCGGAGATGGAGAGGTTTTTGGGGAATGGGGGTAGTGGGGAGGAGCTGGTTCGAGTTTTGGTTACGATGTCTAGGGCAATGTATGCACAGTTGGTGCAGCAGACATTTCAGGCGCCGAAATGTTATCCGGCTTTGCCACCCAGGAGTGATGTGGGTGCTTATATGGAAGCTGAGCTGGGAATGAAGATTGCTTGTGGATTTGAGATGATTTATCAGTTGAAAAAGAGGCAGGGCATGGACGGAAAAGGGAGTACATGGGATGCGTTTAGGCTGAGTCTAGAGCGGAGTGGGTACTTCGAAGGGCTGTTACCAGGATCGAAGGAGTATAAAAGATTGATGAAGAATGCTGAGGAGTATTACAAGAATAGTTCACTGCATGCAAGAGAAAGTGCTACACTAAGTGCTCCAGTGCGAAGAATAGATGAGATCCTTGCCCTTCCTGATTCTGCTGATGACTTTAAGGATCAGGAGATACCGCCATCTGATGATGATTCATGGCTTTATGGTGGAGAGGATGAGCTAAATTCCGTTCTTCAAGAGAGGCAAAAGGAGATGGAACTTTACAATTCAAAAAGGAAACAGAAATCAAAAGAGCAGGATGGGCCCAGCAATCATTCTGATAATTTTGATCTAAAAGATATATCGAACTCTATGCAAGCATTTGTCACAAAAGTGGCCAGTTATGAAGGTGCAGAGGTTCCAGAGGACAGGAATGTAAAGGAAGTGGACTTTGATGTCGATCACTTTATGAAAGACCTGGAATCGTTTATGAGGGGTCAGGGCAATGAAGACATTGGCCGTGATGTTGATATTGAAGAAGGGTCATCATCAGATATGGAGTTCGATGAATCTGAAGATGAGAGTGATATTGCCGAGCCACATGATGATAATGATGAGGGAGGTGCTGCTTTCATGCATTCGTATTCGGACACTCTGAATGATGAACTGAAAGGCACCACACTAAGTAATACCTTTGTCCGCGCAAATGGAGAGTCTGAGTCCATAAAGAAAGATGAGGGAACATCTACTGCTGCAGAAAACATGGAAGAGGAGGATTTCAGTCCTGTAGATGTTGATTTCAATCTTGTAAAGAATTTCCTGGATTCGTTTTCTTCTCAAGATGGACTTCCAGGACCTGCTTCTAACTTGCTTGGACTTATGGGTCTACAGCTACCACCAGATGCTAGCAAAGGGAAATAACCATATTATACACAAACTTGTTTCCTCATTCTTCTTTTCCTTGCCTTTTTCTAAACGGCAATCTTTACAATACTATGTATTACGTATGTTTTAACTTCAAACGGAGAAAAAAGGAGGAGGTGGATTTATGTGGTATTTTTCATTTTTGACCATCAAATAATTTATATATTGATAAATTATGTAAAAAATATTATAAGTTGACGAAATTTATCATGACCAGGAAGTGAAGTAGTAGGTTTTGGTTG
CDS Sequence
- >Solyc11g010660.2.1
ATGGCGGAGCAAGACCCTTACGCCAACATCTTCTCCCAGAAAAACTCCCGTCTAGCTGACGACACGGTATTCTTCTCCATATACCCAGACTTTACCTTAAACCCCACTTCTCCTCCAACCTCCATAACTTCTCAACTCCAATCCCTTCACCTCCAAATCCTCCAAAATCTCTCCCCTTTCACTTCCAATTACATATGGCAACACGAACCCTTCACCCTCACCCTTTCCCCCGGCCCCACCCCTCCCCATCTCTCCGGCAAACTCCGGTACGGGGACAACCTCGAAGACGAATGGTTCGTCGTATTCCTCCTTTTCGAAACCTCAAAACGCTTCCCTAGTGTGTCAATTCGTGTTTGGGATAGTGACGGGGAGTTCTTATTGATCGAAACTGCATTTTATCTCCCCCGTTGGGTTAACCCTGATACAGCAATGAACCGTGTTTTTATCAGAGGTGGGTTTCTTCATATTATCCCTAATTCGGTAATACCCACAACCCCATCAATCCACGAGGCGTTAAATTTGTTAAGGAATGTGAGTAGTACTAGAGCACCTGAAGGAGTGCAGCGTCAGTTAGAGAATAGGTTGAAGGAGTATCCCAATAGAGCGGAGAAGAATGTGCACAAGGTTAGGGTTAGGGTTCCCCTGTCAGTTGCAAAAGTGTTAAAGCATGAGCCTTGTTTGATTTCGCTTGCGGTGGAAGGATTTTACGATAGGGATATTGATACAATGAAGTTCGCGGCGGAGATGGAGAGGTTTTTGGGGAATGGGGGTAGTGGGGAGGAGCTGGTTCGAGTTTTGGTTACGATGTCTAGGGCAATGTATGCACAGTTGGTGCAGCAGACATTTCAGGCGCCGAAATGTTATCCGGCTTTGCCACCCAGGAGTGATGTGGGTGCTTATATGGAAGCTGAGCTGGGAATGAAGATTGCTTGTGGATTTGAGATGATTTATCAGTTGAAAAAGAGGCAGGGCATGGACGGAAAAGGGAGTACATGGGATGCGTTTAGGCTGAGTCTAGAGCGGAGTGGGTACTTCGAAGGGCTGTTACCAGGATCGAAGGAGTATAAAAGATTGATGAAGAATGCTGAGGAGTATTACAAGAATAGTTCACTGCATGCAAGAGAAAGTGCTACACTAAGTGCTCCAGTGCGAAGAATAGATGAGATCCTTGCCCTTCCTGATTCTGCTGATGACTTTAAGGATCAGGAGATACCGCCATCTGATGATGATTCATGGCTTTATGGTGGAGAGGATGAGCTAAATTCCGTTCTTCAAGAGAGGCAAAAGGAGATGGAACTTTACAATTCAAAAAGGAAACAGAAATCAAAAGAGCAGGATGGGCCCAGCAATCATTCTGATAATTTTGATCTAAAAGATATATCGAACTCTATGCAAGCATTTGTCACAAAAGTGGCCAGTTATGAAGGTGCAGAGGTTCCAGAGGACAGGAATGTAAAGGAAGTGGACTTTGATGTCGATCACTTTATGAAAGACCTGGAATCGTTTATGAGGGGTCAGGGCAATGAAGACATTGGCCGTGATGTTGATATTGAAGAAGGGTCATCATCAGATATGGAGTTCGATGAATCTGAAGATGAGAGTGATATTGCCGAGCCACATGATGATAATGATGAGGGAGGTGCTGCTTTCATGCATTCGTATTCGGACACTCTGAATGATGAACTGAAAGGCACCACACTAAGTAATACCTTTGTCCGCGCAAATGGAGAGTCTGAGTCCATAAAGAAAGATGAGGGAACATCTACTGCTGCAGAAAACATGGAAGAGGAGGATTTCAGTCCTGTAGATGTTGATTTCAATCTTGTAAAGAATTTCCTGGATTCGTTTTCTTCTCAAGATGGACTTCCAGGACCTGCTTCTAACTTGCTTGGACTTATGGGTCTACAGCTACCACCAGATGCTAGCAAAGGGAAATAA
Protein Sequence
- >Solyc11g010660.2.1
MAEQDPYANIFSQKNSRLADDTVFFSIYPDFTLNPTSPPTSITSQLQSLHLQILQNLSPFTSNYIWQHEPFTLTLSPGPTPPHLSGKLRYGDNLEDEWFVVFLLFETSKRFPSVSIRVWDSDGEFLLIETAFYLPRWVNPDTAMNRVFIRGGFLHIIPNSVIPTTPSIHEALNLLRNVSSTRAPEGVQRQLENRLKEYPNRAEKNVHKVRVRVPLSVAKVLKHEPCLISLAVEGFYDRDIDTMKFAAEMERFLGNGGSGEELVRVLVTMSRAMYAQLVQQTFQAPKCYPALPPRSDVGAYMEAELGMKIACGFEMIYQLKKRQGMDGKGSTWDAFRLSLERSGYFEGLLPGSKEYKRLMKNAEEYYKNSSLHARESATLSAPVRRIDEILALPDSADDFKDQEIPPSDDDSWLYGGEDELNSVLQERQKEMELYNSKRKQKSKEQDGPSNHSDNFDLKDISNSMQAFVTKVASYEGAEVPEDRNVKEVDFDVDHFMKDLESFMRGQGNEDIGRDVDIEEGSSSDMEFDESEDESDIAEPHDDNDEGGAAFMHSYSDTLNDELKGTTLSNTFVRANGESESIKKDEGTSTAAENMEEEDFSPVDVDFNLVKNFLDSFSSQDGLPGPASNLLGLMGLQLPPDASKGK*