Information report for SlRCM1
Gene Details
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Functional Descriptions
- SlRCM1, which encodes tomato Lutescent1, is required for chlorophyll synthesis and chloroplast development in fruits
- SlRCM1 encodes a chloroplast-targeted metalloendopeptidase that is orthologous to the BCM1 protein of Arabidopsis and the stay-green G protein of soybean.
- SlRCM1 is indeed Lutescent1. These findings provide new insights into the regulation of chloroplast development in tomato fruits.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 101260158
- UniProt accessions: A0A3Q7HGJ1
- AlphaFoldDB: A0A3Q7HGJ1
- EnsemblPlants: Solyc08g005010.3.1
- Gramene: Solyc08g005010.3.1
- GO: GO:0004222 , GO:0016020 , GO:0071586
- OMA: TICYFTG
- InterPro: IPR003675
- PANTHER: PTHR36736 , PTHR36736:SF1
- OrthoDB: A0A3Q7HGJ1
- Pfam: PF02517
- STRING: 4081.A0A3Q7HGJ1
Sequences
cDNA Sequence
- >Solyc08g005010.4.1
TTTCCAAAAAAACTTTTTTCACTACTATATGCACAACGACGCCGAAGAAGAAGGCGGACAAACTGAAGCAACTTGCTCGCCGTGAAACGAAGCCGGAGAAGAAGCTGAAACAACTTTCTCACGGTGATACGACGCCGGAGAAGCAGCTGAAACAATAACCTTGTCTCCGTGAAACGACGTGGGAGAAGTAGCTGAAACAAGTTTGTCTTGGTGAAACGACGCCGGTGAGTTAACTGAAACAAATTTATCGCGGTGAAACGACACCGGAGAAGCAGCTGAAACGACAACTTTATTGCCGCGAATCAACGCCGGAGAAGCAGCTGAAGCAAACTTCTAACAGCTGAAACGACGCCGCTTGCTCATTTTCCGATTCGCTTGTCAGTTTAGACCGGAGTGTTTTGTAAATATGGAATTTCCGTTGATAGCTCGATGTACGAATACTCCATCGACGACGTCGTTTTTAGGATGTAAAGTGAGTTTATGCGATTTTCCGATTAGAAACAATTATCGAGATAAGAGGAATTATAATGAGAAATTTTCGGTAGTGAGAATTAAAGCTATGGCGGAGAAGTCAAGTACCGGCGAGGCTTCATCAGTTGAAATTCGGGAGGGTGAAAATGGAGGAGTAGGATTCACGGGGTCTACTATGGAGGTGACTACATTCAACCAGAGCTTCAGTGATGCGCAGTTACCCGTTTGGGAGAAAATCGGTGCTGTTGTCAGACTCAGTTATGGAATCGGCATCTATGGAGCAATGGCTTTAGCCGGAAAGTTCATATGCTCAATATCTGGAATTGACTGCACAGGAGGGTTCAGTCCATCATTAGATGCCATTGTTGAAGGACTAGGATATGCAGTTCCACCCATTATGGCTCTTCTATTTATACTAGATGATGAAGTTGTGAAGCTATCTCCTCATGCGCGAGCAATCAGGGATGTTGAGGATGAAGAGCTACGGAACTTCTTTTATGGAATGTCACCTTGGCAGTTCATTCTGATTGTCGCTGCTAGCTCTGTTGGAGAGGAACTTTTCTACCGTGCTGCTGTTCAGGGAGCTTTGGCTGACATTTTCGTAAGGAGCACTGATTTGGTGTCTGATGCTCGAGGGATGGCATCATTGACTGGTGTTTTGCCACCTTATGTACCATTTGCTCAAGCATTTGCAGCTGTAATGACAGCAGCTCTTACTGGTTCTTTATATTATATGGCTGCTTCTCCAAAAGATCCTACCTATGTTGTTGCACCAGTGCTGAAGTCGCGTTCAGGCCGTGAAGATCTGAAAAAACTCTTTGCAGCTTGGTACGAGAGGCGGCAGATGAAGAAGATTTATTCTCCTCTACTGGAAGCAATACTAGCCCTTTACCTTGGGTTTGAATGGATCCAGGTAACATGAATTTCCAGTTTGTGTTAATTTGACTCGAGAGTTTATATGGGTTCAACTAAATCTACTATCGTCGATATGGAGGGTAGGAACATACGTGAAAAACCACCAAAATTACAATGAATACCGACTTCCGAACTCATTCTTTCATCACTACGATGAGTTCAGTGCTAAAAATTTTAAAATAGTTTTTTTTGAATTGTACTTTGGGAGAGAGGTTATAACACTGTATAAAAACTATGTAACATATAAGAAAAATAATAGGTGCATGGCTTAAGTTAGTTTATACATTAGGCTAGCAAATATATACGTTAAAAATAAAAATTGTACCTCTTGTACATTATGACCTTACAATGAGAAAGTCACTCAACTTTTGACTTTAGTAATTGCCCATATAGTTTTATGCAATTATATTTGTAGTGAAG
CDS Sequence
- >Solyc08g005010.4.1
ATGGAATTTCCGTTGATAGCTCGATGTACGAATACTCCATCGACGACGTCGTTTTTAGGATGTAAAGTGAGTTTATGCGATTTTCCGATTAGAAACAATTATCGAGATAAGAGGAATTATAATGAGAAATTTTCGGTAGTGAGAATTAAAGCTATGGCGGAGAAGTCAAGTACCGGCGAGGCTTCATCAGTTGAAATTCGGGAGGGTGAAAATGGAGGAGTAGGATTCACGGGGTCTACTATGGAGGTGACTACATTCAACCAGAGCTTCAGTGATGCGCAGTTACCCGTTTGGGAGAAAATCGGTGCTGTTGTCAGACTCAGTTATGGAATCGGCATCTATGGAGCAATGGCTTTAGCCGGAAAGTTCATATGCTCAATATCTGGAATTGACTGCACAGGAGGGTTCAGTCCATCATTAGATGCCATTGTTGAAGGACTAGGATATGCAGTTCCACCCATTATGGCTCTTCTATTTATACTAGATGATGAAGTTGTGAAGCTATCTCCTCATGCGCGAGCAATCAGGGATGTTGAGGATGAAGAGCTACGGAACTTCTTTTATGGAATGTCACCTTGGCAGTTCATTCTGATTGTCGCTGCTAGCTCTGTTGGAGAGGAACTTTTCTACCGTGCTGCTGTTCAGGGAGCTTTGGCTGACATTTTCGTAAGGAGCACTGATTTGGTGTCTGATGCTCGAGGGATGGCATCATTGACTGGTGTTTTGCCACCTTATGTACCATTTGCTCAAGCATTTGCAGCTGTAATGACAGCAGCTCTTACTGGTTCTTTATATTATATGGCTGCTTCTCCAAAAGATCCTACCTATGTTGTTGCACCAGTGCTGAAGTCGCGTTCAGGCCGTGAAGATCTGAAAAAACTCTTTGCAGCTTGGTACGAGAGGCGGCAGATGAAGAAGATTTATTCTCCTCTACTGGAAGCAATACTAGCCCTTTACCTTGGGTTTGAATGGATCCAGGTAACATGA
Protein Sequence
- >Solyc08g005010.4.1
MEFPLIARCTNTPSTTSFLGCKVSLCDFPIRNNYRDKRNYNEKFSVVRIKAMAEKSSTGEASSVEIREGENGGVGFTGSTMEVTTFNQSFSDAQLPVWEKIGAVVRLSYGIGIYGAMALAGKFICSISGIDCTGGFSPSLDAIVEGLGYAVPPIMALLFILDDEVVKLSPHARAIRDVEDEELRNFFYGMSPWQFILIVAASSVGEELFYRAAVQGALADIFVRSTDLVSDARGMASLTGVLPPYVPFAQAFAAVMTAALTGSLYYMAASPKDPTYVVAPVLKSRSGREDLKKLFAAWYERRQMKKIYSPLLEAILALYLGFEWIQVT*