Gene Details:
- Gene ID: Solyc10g076290
- Gene Symbol: SlRAE1
- Gene Name: COI1 F-box domain-containing protein
- Genome: Tomato Genome version SL4.0
- Species: Solanum lycopersicum
Functional Descriptions:
- SlSTOP1 from SlRAE1-mediated degradation to modulate aluminum resistance.
- SlRAE1, an AtRAE1 homologue, was also activated by SlSTOP1.
- SlRAE1 functions as an E3-ligase, promoting the degradation of SlSTOP1 and SlSZP1.
Function-related keywords:
Literature:
- A zinc finger protein SlSZP1 protects SlSTOP1 from SlRAE1-mediated degradation to modulate aluminum resistance. DOI: 10.1111/nph.18336 ; PMID: 35739643
Related News:
Gene Resources:
- NCBI ID: 101243752
- UniProt accessions: A0A3Q7IJF6
Sequences:
cDNA Sequence
- >Solyc10g076290.2.1
AAGGTAATTGAAACTTTCTTTCTTCTTCTTCTTCTTCCTCCTTACTTGGTTTATTCTCAACTAGGCCAGTGTTTTTCTGTTAAAACGGTTCCTTCTCAATTTTCCATTTTCTATATGTGATCAAAATTCACAAATGAACTACTAATTACTTCTACACCTGCAAATTTTCCCTTAAAAAATCCCACCATTACTAAGAATAACCAAATCTAAGCTGCAATTTAACCATAAAGCTACAATCTTTGTCCAAAATGATCCCTAAAAGTTCAATCTTGGGAACAATGAAGAAGCAAAAGCCAATTTCAGAAACCCTTTTCAACCCCTTTGATCTACTTTCTGAAGAAATTGTCTTTTCAGTTCTTGATTGTCTTAATGACAACCCATTTGACAAGAAATCATTTTCTCTTGTTTGCAAATCTTTTTATGCTATTGAGTCTCATCATAGGAAAATACTGAAACCCTTTAGGTCAGAACACTTGACAAAGGTTCTTAGCAGATACCCACAAGTTACCCATCTGGATCTTTCCCTTTGTCCTAGAATTACAGACGGTTCACTAAGAGTTATAGCTAATTTCTGTAAGGAAATGTTGAGGTCAATCAATCTTTCTAGGTCTAAGTCTTTTACCCATGTGGGGTTGTCGAATTTGGTGATGAATTGTGGGAATTTGGTTGAGATTGATTTGTCAAATGCTACTGAGTTGAAGGATGTGAGTGCTGCTGCATTAGCTGAGGCAAAAAACTTGGAGAAGTTGTGGTTGGTGAGGTGTAAGTCTTTAACTGATATTGGACTTGGGTGTATTGCTGTTGGCTGCAGGAAGCTCAGATTGCTTAGCCTGAGATGGTGTTTGGGTGTTGGTGATCTTGGTGTGGGGTTGATTGCAGTCAAGTGTAAGGAGATTAGGAGTTTGGATCTTTCTTACTTGCCGATCACTAATGAATGCTTATCATCAATCTCGAAACTGCAATATCTTGAAGAATTGATTCTAGAAGGCTGTTATGGAATTGATGATGACAGCCTTGCATCCCTCGAGCAAGGCTGCAAGTCACTGGAGAAACTTGATATGTCAAGCTGTCAGAATGTTAGTCATGTGGGTTTGTCATCTCTTACTAGCTGTGCTGGATGTCTGCGGCAACTTGTACTATCATATGGTTCTCCTGTTACACCTGCTGTCGCAGATAGCTTGCAGAAGCTTTCTAGGTTGCAGTGCGTCAAACTAGATGGCTGCCAAGTTACATGCTCTGGACTGATGGCTATTGGAAATTGGTGTGTCTCACTTAGAGAACTGAGCTTAAGTAAATGTGTGGGAGTGACAGATGAAGGTCTCTCCTCCCTTGTAACGAAGCACAAAGACTTAAGGAAGCTTGACATTACTTGTTGCCGCAAGATCACTTACATATCAATTTCCCATATAACGAATTCTTGTGCCTCCCTTACTTCTCTTAGGATGGAGTCTTGTACTCTTGTTCCGAGAGAAGCTTTTGTTCTAATTGGACAGCGTTGCCAGTACCTTGAAGAGCTTGACCTTACAGACAACGAAATTGATGATGAAGGTTTGAAGACCATTTCCAAGTGTGCCAGCCTTTCCAGCTTAAAGCTAGGGATCTGTTTGAATATAACCGATCAGGGTCTTATGCACATTGGCATGTGCTGCTCAAATCTTAAGGAGCTTGACTTATATAGGTCTGCTGGAATTTCCGACTTGGGAATATTAGCAATCTCTCGTGGTTGTATTGGCCTTGAAATGATCAATATTGCCTATTGCAATCGTATTACTGATAGCTCATTCATATCTATATCAAAGTGTTCAAAGTTGAATACACTTGAAAGTCGAGGTTGTCCTCTTGTCACATCTTTAGGTCTTGCAGCTGTTGCTGTGGGATGTAAGCAGCTTACGACACTAGACATAAAAAATTGTCACAACATTGATGATGCTGGAATGATTCCACTTGCTCACTTCTTGACAAACCTCAAACAGATAAATTTATCCTACACTTCAGTGACGGATGTGGGGCTGTTGTCTCTTGCCAGCATCAGCGGTCTACAGAACATGACAATCCTGCACCTCAAGGGTTTATCTCCTGGTGGACTAGGAGCTGCACTGTTGGCTTGTGGCGGACTTACTAAAGTTAAGCTGCAGACATCATTTAAATCATTGCTACCACAACCTCTCCTTCAACATCTAGAATCCCGGGGTTGTGTTTTTCAGTGGAGAGAGAAACCATTTCAGGCTGAAGTAGATCCAATATACTGGAAAATTCAGCTGGACAATTTAGAATGAAGACTTGAGCCCTCAGTTTGAGCCATTTACGCGAGTGTCCTAAAATGGATAGTCGCCCCAGAGCCTCCGGAGTCCTTACTTCATCTGTTAGCACTTCATCAGGCAAGGTGCATTGTTTATGGCGACTGTTTTCCCTGTTAAGTGTCTGCAACTTGTTCGTCTGTCCATTCAGCATTGCCCCGGCATCAAATCAATTTTTTCAAAAATGTTATGAGATGGATTAAACAGATCAAAATCATGTTTATTGTTTAGCAATCAATATCTGGGTTTGTGAATGTTTATTCCTTTTGACTAATGTGATTTCACGTGAAGTAACTTCAAATTTACTCTCAATCAAACAGTTATTTGACAGAAATAGC
CDS Sequence
- >Solyc10g076290.2.1
ATGATCCCTAAAAGTTCAATCTTGGGAACAATGAAGAAGCAAAAGCCAATTTCAGAAACCCTTTTCAACCCCTTTGATCTACTTTCTGAAGAAATTGTCTTTTCAGTTCTTGATTGTCTTAATGACAACCCATTTGACAAGAAATCATTTTCTCTTGTTTGCAAATCTTTTTATGCTATTGAGTCTCATCATAGGAAAATACTGAAACCCTTTAGGTCAGAACACTTGACAAAGGTTCTTAGCAGATACCCACAAGTTACCCATCTGGATCTTTCCCTTTGTCCTAGAATTACAGACGGTTCACTAAGAGTTATAGCTAATTTCTGTAAGGAAATGTTGAGGTCAATCAATCTTTCTAGGTCTAAGTCTTTTACCCATGTGGGGTTGTCGAATTTGGTGATGAATTGTGGGAATTTGGTTGAGATTGATTTGTCAAATGCTACTGAGTTGAAGGATGTGAGTGCTGCTGCATTAGCTGAGGCAAAAAACTTGGAGAAGTTGTGGTTGGTGAGGTGTAAGTCTTTAACTGATATTGGACTTGGGTGTATTGCTGTTGGCTGCAGGAAGCTCAGATTGCTTAGCCTGAGATGGTGTTTGGGTGTTGGTGATCTTGGTGTGGGGTTGATTGCAGTCAAGTGTAAGGAGATTAGGAGTTTGGATCTTTCTTACTTGCCGATCACTAATGAATGCTTATCATCAATCTCGAAACTGCAATATCTTGAAGAATTGATTCTAGAAGGCTGTTATGGAATTGATGATGACAGCCTTGCATCCCTCGAGCAAGGCTGCAAGTCACTGGAGAAACTTGATATGTCAAGCTGTCAGAATGTTAGTCATGTGGGTTTGTCATCTCTTACTAGCTGTGCTGGATGTCTGCGGCAACTTGTACTATCATATGGTTCTCCTGTTACACCTGCTGTCGCAGATAGCTTGCAGAAGCTTTCTAGGTTGCAGTGCGTCAAACTAGATGGCTGCCAAGTTACATGCTCTGGACTGATGGCTATTGGAAATTGGTGTGTCTCACTTAGAGAACTGAGCTTAAGTAAATGTGTGGGAGTGACAGATGAAGGTCTCTCCTCCCTTGTAACGAAGCACAAAGACTTAAGGAAGCTTGACATTACTTGTTGCCGCAAGATCACTTACATATCAATTTCCCATATAACGAATTCTTGTGCCTCCCTTACTTCTCTTAGGATGGAGTCTTGTACTCTTGTTCCGAGAGAAGCTTTTGTTCTAATTGGACAGCGTTGCCAGTACCTTGAAGAGCTTGACCTTACAGACAACGAAATTGATGATGAAGGTTTGAAGACCATTTCCAAGTGTGCCAGCCTTTCCAGCTTAAAGCTAGGGATCTGTTTGAATATAACCGATCAGGGTCTTATGCACATTGGCATGTGCTGCTCAAATCTTAAGGAGCTTGACTTATATAGGTCTGCTGGAATTTCCGACTTGGGAATATTAGCAATCTCTCGTGGTTGTATTGGCCTTGAAATGATCAATATTGCCTATTGCAATCGTATTACTGATAGCTCATTCATATCTATATCAAAGTGTTCAAAGTTGAATACACTTGAAAGTCGAGGTTGTCCTCTTGTCACATCTTTAGGTCTTGCAGCTGTTGCTGTGGGATGTAAGCAGCTTACGACACTAGACATAAAAAATTGTCACAACATTGATGATGCTGGAATGATTCCACTTGCTCACTTCTTGACAAACCTCAAACAGATAAATTTATCCTACACTTCAGTGACGGATGTGGGGCTGTTGTCTCTTGCCAGCATCAGCGGTCTACAGAACATGACAATCCTGCACCTCAAGGGTTTATCTCCTGGTGGACTAGGAGCTGCACTGTTGGCTTGTGGCGGACTTACTAAAGTTAAGCTGCAGACATCATTTAAATCATTGCTACCACAACCTCTCCTTCAACATCTAGAATCCCGGGGTTGTGTTTTTCAGTGGAGAGAGAAACCATTTCAGGCTGAAGTAGATCCAATATACTGGAAAATTCAGCTGGACAATTTAGAATGA
Protein Sequence
- >Solyc10g076290.2.1
MIPKSSILGTMKKQKPISETLFNPFDLLSEEIVFSVLDCLNDNPFDKKSFSLVCKSFYAIESHHRKILKPFRSEHLTKVLSRYPQVTHLDLSLCPRITDGSLRVIANFCKEMLRSINLSRSKSFTHVGLSNLVMNCGNLVEIDLSNATELKDVSAAALAEAKNLEKLWLVRCKSLTDIGLGCIAVGCRKLRLLSLRWCLGVGDLGVGLIAVKCKEIRSLDLSYLPITNECLSSISKLQYLEELILEGCYGIDDDSLASLEQGCKSLEKLDMSSCQNVSHVGLSSLTSCAGCLRQLVLSYGSPVTPAVADSLQKLSRLQCVKLDGCQVTCSGLMAIGNWCVSLRELSLSKCVGVTDEGLSSLVTKHKDLRKLDITCCRKITYISISHITNSCASLTSLRMESCTLVPREAFVLIGQRCQYLEELDLTDNEIDDEGLKTISKCASLSSLKLGICLNITDQGLMHIGMCCSNLKELDLYRSAGISDLGILAISRGCIGLEMINIAYCNRITDSSFISISKCSKLNTLESRGCPLVTSLGLAAVAVGCKQLTTLDIKNCHNIDDAGMIPLAHFLTNLKQINLSYTSVTDVGLLSLASISGLQNMTILHLKGLSPGGLGAALLACGGLTKVKLQTSFKSLLPQPLLQHLESRGCVFQWREKPFQAEVDPIYWKIQLDNLE*