Information report for SlJAF13
Gene Details
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Functional Descriptions
- Our findings support a sophisticated regulatory network, in which SlJAF13 acts as an upstream dual-function regulator that fine tunes anthocyanin biosynthesis in tomato.
- A dual-function transcription factor, SlJAF13, promotes anthocyanin biosynthesis in tomato.
- Two class IIIf basic helix–loop–helix (bHLH) transcription factors, SlJAF13 and SlAN1, are involved in the control of anthocyanin synthesis.
- SlJAF13 interacts with SlMYC2, inhibiting SlMYC2 activation of SlJAZ2 transcription, thus constituting a negative feedback loop governing anthocyanin accumulation.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 101256795
- UniProt accessions: A0A3Q7HU77
- AlphaFoldDB: A0A3Q7HU77
- EnsemblPlants: Solyc08g081140.3.1
- Gramene: Solyc08g081140.3.1
- GO: GO:0005634 , GO:0009889 , GO:0046983 , GO:0080090
- OMA: MSCLWSE
- InterPro: IPR011598 , IPR036638 , IPR054502
- PANTHER: PTHR46266 , PTHR46266:SF3
- SUPFAM: SSF47459
- PROSITE: PS50888
- Gene3D: 4.10.280.10
- Pfam: PF00010 , PF22754
- STRING: 4081.A0A3Q7HU77
Sequences
cDNA Sequence
- >Solyc08g081140.4.1
TCTTTATGATTTTAGCTCAAAAGGGTGCTTACTACTTAGTCATTAACATTATCCTTGTGAAAAAATGGCTGTTTTGGCCTTGTTTCTTGAAATCTGAAACTAAAAAATTCTCTTTGTATGGTCCAATATGGTTGTGGTCCTGAGAACTAAGATCCCATTTGGGATCAAGATTCAAGATTTATGCTTTCTTGGTGTTTTATGATTTTGGTGTCGTTTTTTAGAATTTTGAGCTGATTTTTTCTTCACTGTCATTTTGGTGAGACAAAAGATTGAAGCTTTGAAAATGGCTATGGGACACCAAGATCAAGATGGAGTCCCAGGCAACTTGAGAAAGCAACTTGCTCTTGCTGTTAGAGGCATTCAATGGAGCTATGCAATCTTCTGGTCAACTGCAGTTACACAACCAGGGGTGTTGAAATGGATTGATGGGTACTATAATGGGGATATCAAGACCAGGAAGACTGTTCAGGCGGGGGAAGTTAATGAAGACCAGCTGGGGTTGCATAGAACTGAGCAATTGAAAGAACTTTATAGTTCCCTCTTAACAAGTGAAAGTGAAGAAGACCTGCAGCCACAGGCCAAAAGGCCGTCGGCCTCATTATCTCCAGAAGATCTCACTGATACAGAGTGGTATTTCCTAGTATGCATGTCATTTGTCTTCAATGTTGGCCAAGGGTTACCAGGGAAGACCTTAGCAACAAATGAAACTGTTTGGCTGTGCAACGCTCACCAAGCCGAGAGTAAAGTCTTTTCTCGTTCTTTGCTAGCAAAGAGTGCATCTATCCAGACTGTTGTATGCTTTCCCTATTTAGGAGGCGTAATTGAGCTGGGAGTCACCGAGCTTGTCACGGAAGATCCTAACCTCATTCAGCAAATAAAAAATTCCTTTCTAGAGGTTGATTACTCCGTTATTTTGAAGAGGCCTAATTATGTCTCCAACGATGCAAAAAATGACACGAATATCGGTAGCCAAAAGCCTGATCATAATGCACTTGAAAATGATGCTTATCCAGTTGAAATAAATTCACCTCATGATAGTTCAAATGGTTTTGTCGCCAATCAAGAGGCAGAAGATTCACTGATGGTGGTAGACGGTATTGGGGAAACTTCACAAGCTCAAAGCTGGAGGTTCATGGATGATAATATCAGTAATGGTGCGAATAATTCCTTGAATTCCAGTGACTGCATCTCTCAAAACAATGCAAATTGTGAAAAGTTGTCCCCTCTTTCGAGTGGAGAGAAGGAAACTAAGCCTTGCCCACTAGACCGTCAAGAGAACGATCAGAAGAAACCGCATCTTTTAGATCACCAAGGAGATGATGCTCAATATCAAGCTGTCCTTTCTACTCTTTTAAAGAGTTCTGACCAATTAACTTTGGGACCACATTTTAGAAATATGAATAAAAAGTCAAGTTTTGCTAGTTGGAAAACCGATATTCAGATGCCGAGATTTGGAACTGCACAAAAACTATTGAAGAAGGTACTTCTTGAAGTTCCTAGAATGCATGCTGGTGTTATACATAAATTCAGCAGAGAAAATGGTAAAAAGAATAGCCTTTGGAGACCAGAAGTTGATGACATTGATAGAAACCGTGTTATTTCAGAGAGAAGGCGAAGAGAAAAGATAAATGAGAGATTTATGCATCTTGCATCGATGCTGCCAACTAGTAGCAAGGTTGACAAAATATCACTACTCGATGAGACAATAGAATACATGAAAGAGCTTGAAAGGAGAGTTCAGGAGCTGGAGGCGAGATCAGCAAGACGATCAAATGATACTGCAGAGCAGACATCTGATAATTGTGGCACTAGCAAATTCAATGACATCAGGGGATCACTACCGAACAAAAGGAAGGCATGTGATATGGATGAAATAGAACCTGAAAGCTCCAATGGATTACTGAAATGTAGTTCAGCTGATAGTATTGTCATCAATATGATCGATAAGGAAGTCTCGATCAAGATGAGTTGTCTTTGGAGCGAGAGCTTGTTGCTTAAAATTATGGAGGCACTGACTGACCTACATATGGATTGCCATACAGTTCAGTCTTCCAACCTTGATGGGATTCTATCCATTGCTATCGAATCCAAGTCAACCGGATCGAAAACACTAGCAGTCGGAACAATTAGAGAAGCACTTCAGAGAGTAGTATGGAAATCTTGAAGATTAGTCAGTCAAGGTTGGTCAATTAAGCCCATATGAAAAAGAGCTTGGTCAGTCCTGTCCTTAGTGGATAGTTAAAGCTTGTGTATAGTATTGTACTTATGCTTTTTTCGAAGATTTGAAAAGCCTAGGGAAAAAGTAGTAATTTGGAGTAGCTTTCTCCTAATGCATCATCCTCTTTCATGATCATCACTTTTTTGTGGTCCTCTAAAAAGTTCATGAAAGTAAAGTTGCTGAATCTTGCTATTGATTTCTGTCCCCACTAACAAAGTTGAAAGGTCATCTCAGGAATGGAAAAAAGTTTGCTGTTTGCTTT
CDS Sequence
- >Solyc08g081140.4.1
ATGGCTATGGGACACCAAGATCAAGATGGAGTCCCAGGCAACTTGAGAAAGCAACTTGCTCTTGCTGTTAGAGGCATTCAATGGAGCTATGCAATCTTCTGGTCAACTGCAGTTACACAACCAGGGGTGTTGAAATGGATTGATGGGTACTATAATGGGGATATCAAGACCAGGAAGACTGTTCAGGCGGGGGAAGTTAATGAAGACCAGCTGGGGTTGCATAGAACTGAGCAATTGAAAGAACTTTATAGTTCCCTCTTAACAAGTGAAAGTGAAGAAGACCTGCAGCCACAGGCCAAAAGGCCGTCGGCCTCATTATCTCCAGAAGATCTCACTGATACAGAGTGGTATTTCCTAGTATGCATGTCATTTGTCTTCAATGTTGGCCAAGGGTTACCAGGGAAGACCTTAGCAACAAATGAAACTGTTTGGCTGTGCAACGCTCACCAAGCCGAGAGTAAAGTCTTTTCTCGTTCTTTGCTAGCAAAGAGTGCATCTATCCAGACTGTTGTATGCTTTCCCTATTTAGGAGGCGTAATTGAGCTGGGAGTCACCGAGCTTGTCACGGAAGATCCTAACCTCATTCAGCAAATAAAAAATTCCTTTCTAGAGGTTGATTACTCCGTTATTTTGAAGAGGCCTAATTATGTCTCCAACGATGCAAAAAATGACACGAATATCGGTAGCCAAAAGCCTGATCATAATGCACTTGAAAATGATGCTTATCCAGTTGAAATAAATTCACCTCATGATAGTTCAAATGGTTTTGTCGCCAATCAAGAGGCAGAAGATTCACTGATGGTGGTAGACGGTATTGGGGAAACTTCACAAGCTCAAAGCTGGAGGTTCATGGATGATAATATCAGTAATGGTGCGAATAATTCCTTGAATTCCAGTGACTGCATCTCTCAAAACAATGCAAATTGTGAAAAGTTGTCCCCTCTTTCGAGTGGAGAGAAGGAAACTAAGCCTTGCCCACTAGACCGTCAAGAGAACGATCAGAAGAAACCGCATCTTTTAGATCACCAAGGAGATGATGCTCAATATCAAGCTGTCCTTTCTACTCTTTTAAAGAGTTCTGACCAATTAACTTTGGGACCACATTTTAGAAATATGAATAAAAAGTCAAGTTTTGCTAGTTGGAAAACCGATATTCAGATGCCGAGATTTGGAACTGCACAAAAACTATTGAAGAAGGTACTTCTTGAAGTTCCTAGAATGCATGCTGGTGTTATACATAAATTCAGCAGAGAAAATGGTAAAAAGAATAGCCTTTGGAGACCAGAAGTTGATGACATTGATAGAAACCGTGTTATTTCAGAGAGAAGGCGAAGAGAAAAGATAAATGAGAGATTTATGCATCTTGCATCGATGCTGCCAACTAGTAGCAAGGTTGACAAAATATCACTACTCGATGAGACAATAGAATACATGAAAGAGCTTGAAAGGAGAGTTCAGGAGCTGGAGGCGAGATCAGCAAGACGATCAAATGATACTGCAGAGCAGACATCTGATAATTGTGGCACTAGCAAATTCAATGACATCAGGGGATCACTACCGAACAAAAGGAAGGCATGTGATATGGATGAAATAGAACCTGAAAGCTCCAATGGATTACTGAAATGTAGTTCAGCTGATAGTATTGTCATCAATATGATCGATAAGGAAGTCTCGATCAAGATGAGTTGTCTTTGGAGCGAGAGCTTGTTGCTTAAAATTATGGAGGCACTGACTGACCTACATATGGATTGCCATACAGTTCAGTCTTCCAACCTTGATGGGATTCTATCCATTGCTATCGAATCCAAGTCAACCGGATCGAAAACACTAGCAGTCGGAACAATTAGAGAAGCACTTCAGAGAGTAGTATGGAAATCTTGA
Protein Sequence
- >Solyc08g081140.4.1
MAMGHQDQDGVPGNLRKQLALAVRGIQWSYAIFWSTAVTQPGVLKWIDGYYNGDIKTRKTVQAGEVNEDQLGLHRTEQLKELYSSLLTSESEEDLQPQAKRPSASLSPEDLTDTEWYFLVCMSFVFNVGQGLPGKTLATNETVWLCNAHQAESKVFSRSLLAKSASIQTVVCFPYLGGVIELGVTELVTEDPNLIQQIKNSFLEVDYSVILKRPNYVSNDAKNDTNIGSQKPDHNALENDAYPVEINSPHDSSNGFVANQEAEDSLMVVDGIGETSQAQSWRFMDDNISNGANNSLNSSDCISQNNANCEKLSPLSSGEKETKPCPLDRQENDQKKPHLLDHQGDDAQYQAVLSTLLKSSDQLTLGPHFRNMNKKSSFASWKTDIQMPRFGTAQKLLKKVLLEVPRMHAGVIHKFSRENGKKNSLWRPEVDDIDRNRVISERRRREKINERFMHLASMLPTSSKVDKISLLDETIEYMKELERRVQELEARSARRSNDTAEQTSDNCGTSKFNDIRGSLPNKRKACDMDEIEPESSNGLLKCSSADSIVINMIDKEVSIKMSCLWSESLLLKIMEALTDLHMDCHTVQSSNLDGILSIAIESKSTGSKTLAVGTIREALQRVVWKS*