Gene Details:
- Gene ID: Solyc08g081140
- Gene Symbol: SlJAF13
- Gene Name: bHLH-type transcription factor JAF13
- Genome: Tomato Genome version SL4.0
- Species: Solanum lycopersicum
Functional Descriptions:
- Our findings support a sophisticated regulatory network, in which SlJAF13 acts as an upstream dual-function regulator that fine tunes anthocyanin biosynthesis in tomato.
- A dual-function transcription factor, SlJAF13, promotes anthocyanin biosynthesis in tomato.
- Two class IIIf basic helix–loop–helix (bHLH) transcription factors, SlJAF13 and SlAN1, are involved in the control of anthocyanin synthesis.
- SlJAF13 interacts with SlMYC2, inhibiting SlMYC2 activation of SlJAZ2 transcription, thus constituting a negative feedback loop governing anthocyanin accumulation.
Function-related keywords:
Literature:
- A dual-function transcription factor, SlJAF13, promotes anthocyanin biosynthesis in tomato. DOI: 10.1093/jxb/erac209 ; PMID: 35552695
Related News:
Gene Resources:
- NCBI ID: 101256795
- UniProt accessions: A0A3Q7HU77
Sequences:
cDNA Sequence
- >Solyc08g081140.4.1
TCTTTATGATTTTAGCTCAAAAGGGTGCTTACTACTTAGTCATTAACATTATCCTTGTGAAAAAATGGCTGTTTTGGCCTTGTTTCTTGAAATCTGAAACTAAAAAATTCTCTTTGTATGGTCCAATATGGTTGTGGTCCTGAGAACTAAGATCCCATTTGGGATCAAGATTCAAGATTTATGCTTTCTTGGTGTTTTATGATTTTGGTGTCGTTTTTTAGAATTTTGAGCTGATTTTTTCTTCACTGTCATTTTGGTGAGACAAAAGATTGAAGCTTTGAAAATGGCTATGGGACACCAAGATCAAGATGGAGTCCCAGGCAACTTGAGAAAGCAACTTGCTCTTGCTGTTAGAGGCATTCAATGGAGCTATGCAATCTTCTGGTCAACTGCAGTTACACAACCAGGGGTGTTGAAATGGATTGATGGGTACTATAATGGGGATATCAAGACCAGGAAGACTGTTCAGGCGGGGGAAGTTAATGAAGACCAGCTGGGGTTGCATAGAACTGAGCAATTGAAAGAACTTTATAGTTCCCTCTTAACAAGTGAAAGTGAAGAAGACCTGCAGCCACAGGCCAAAAGGCCGTCGGCCTCATTATCTCCAGAAGATCTCACTGATACAGAGTGGTATTTCCTAGTATGCATGTCATTTGTCTTCAATGTTGGCCAAGGGTTACCAGGGAAGACCTTAGCAACAAATGAAACTGTTTGGCTGTGCAACGCTCACCAAGCCGAGAGTAAAGTCTTTTCTCGTTCTTTGCTAGCAAAGAGTGCATCTATCCAGACTGTTGTATGCTTTCCCTATTTAGGAGGCGTAATTGAGCTGGGAGTCACCGAGCTTGTCACGGAAGATCCTAACCTCATTCAGCAAATAAAAAATTCCTTTCTAGAGGTTGATTACTCCGTTATTTTGAAGAGGCCTAATTATGTCTCCAACGATGCAAAAAATGACACGAATATCGGTAGCCAAAAGCCTGATCATAATGCACTTGAAAATGATGCTTATCCAGTTGAAATAAATTCACCTCATGATAGTTCAAATGGTTTTGTCGCCAATCAAGAGGCAGAAGATTCACTGATGGTGGTAGACGGTATTGGGGAAACTTCACAAGCTCAAAGCTGGAGGTTCATGGATGATAATATCAGTAATGGTGCGAATAATTCCTTGAATTCCAGTGACTGCATCTCTCAAAACAATGCAAATTGTGAAAAGTTGTCCCCTCTTTCGAGTGGAGAGAAGGAAACTAAGCCTTGCCCACTAGACCGTCAAGAGAACGATCAGAAGAAACCGCATCTTTTAGATCACCAAGGAGATGATGCTCAATATCAAGCTGTCCTTTCTACTCTTTTAAAGAGTTCTGACCAATTAACTTTGGGACCACATTTTAGAAATATGAATAAAAAGTCAAGTTTTGCTAGTTGGAAAACCGATATTCAGATGCCGAGATTTGGAACTGCACAAAAACTATTGAAGAAGGTACTTCTTGAAGTTCCTAGAATGCATGCTGGTGTTATACATAAATTCAGCAGAGAAAATGGTAAAAAGAATAGCCTTTGGAGACCAGAAGTTGATGACATTGATAGAAACCGTGTTATTTCAGAGAGAAGGCGAAGAGAAAAGATAAATGAGAGATTTATGCATCTTGCATCGATGCTGCCAACTAGTAGCAAGGTTGACAAAATATCACTACTCGATGAGACAATAGAATACATGAAAGAGCTTGAAAGGAGAGTTCAGGAGCTGGAGGCGAGATCAGCAAGACGATCAAATGATACTGCAGAGCAGACATCTGATAATTGTGGCACTAGCAAATTCAATGACATCAGGGGATCACTACCGAACAAAAGGAAGGCATGTGATATGGATGAAATAGAACCTGAAAGCTCCAATGGATTACTGAAATGTAGTTCAGCTGATAGTATTGTCATCAATATGATCGATAAGGAAGTCTCGATCAAGATGAGTTGTCTTTGGAGCGAGAGCTTGTTGCTTAAAATTATGGAGGCACTGACTGACCTACATATGGATTGCCATACAGTTCAGTCTTCCAACCTTGATGGGATTCTATCCATTGCTATCGAATCCAAGTCAACCGGATCGAAAACACTAGCAGTCGGAACAATTAGAGAAGCACTTCAGAGAGTAGTATGGAAATCTTGAAGATTAGTCAGTCAAGGTTGGTCAATTAAGCCCATATGAAAAAGAGCTTGGTCAGTCCTGTCCTTAGTGGATAGTTAAAGCTTGTGTATAGTATTGTACTTATGCTTTTTTCGAAGATTTGAAAAGCCTAGGGAAAAAGTAGTAATTTGGAGTAGCTTTCTCCTAATGCATCATCCTCTTTCATGATCATCACTTTTTTGTGGTCCTCTAAAAAGTTCATGAAAGTAAAGTTGCTGAATCTTGCTATTGATTTCTGTCCCCACTAACAAAGTTGAAAGGTCATCTCAGGAATGGAAAAAAGTTTGCTGTTTGCTTT
CDS Sequence
- >Solyc08g081140.4.1
ATGGCTATGGGACACCAAGATCAAGATGGAGTCCCAGGCAACTTGAGAAAGCAACTTGCTCTTGCTGTTAGAGGCATTCAATGGAGCTATGCAATCTTCTGGTCAACTGCAGTTACACAACCAGGGGTGTTGAAATGGATTGATGGGTACTATAATGGGGATATCAAGACCAGGAAGACTGTTCAGGCGGGGGAAGTTAATGAAGACCAGCTGGGGTTGCATAGAACTGAGCAATTGAAAGAACTTTATAGTTCCCTCTTAACAAGTGAAAGTGAAGAAGACCTGCAGCCACAGGCCAAAAGGCCGTCGGCCTCATTATCTCCAGAAGATCTCACTGATACAGAGTGGTATTTCCTAGTATGCATGTCATTTGTCTTCAATGTTGGCCAAGGGTTACCAGGGAAGACCTTAGCAACAAATGAAACTGTTTGGCTGTGCAACGCTCACCAAGCCGAGAGTAAAGTCTTTTCTCGTTCTTTGCTAGCAAAGAGTGCATCTATCCAGACTGTTGTATGCTTTCCCTATTTAGGAGGCGTAATTGAGCTGGGAGTCACCGAGCTTGTCACGGAAGATCCTAACCTCATTCAGCAAATAAAAAATTCCTTTCTAGAGGTTGATTACTCCGTTATTTTGAAGAGGCCTAATTATGTCTCCAACGATGCAAAAAATGACACGAATATCGGTAGCCAAAAGCCTGATCATAATGCACTTGAAAATGATGCTTATCCAGTTGAAATAAATTCACCTCATGATAGTTCAAATGGTTTTGTCGCCAATCAAGAGGCAGAAGATTCACTGATGGTGGTAGACGGTATTGGGGAAACTTCACAAGCTCAAAGCTGGAGGTTCATGGATGATAATATCAGTAATGGTGCGAATAATTCCTTGAATTCCAGTGACTGCATCTCTCAAAACAATGCAAATTGTGAAAAGTTGTCCCCTCTTTCGAGTGGAGAGAAGGAAACTAAGCCTTGCCCACTAGACCGTCAAGAGAACGATCAGAAGAAACCGCATCTTTTAGATCACCAAGGAGATGATGCTCAATATCAAGCTGTCCTTTCTACTCTTTTAAAGAGTTCTGACCAATTAACTTTGGGACCACATTTTAGAAATATGAATAAAAAGTCAAGTTTTGCTAGTTGGAAAACCGATATTCAGATGCCGAGATTTGGAACTGCACAAAAACTATTGAAGAAGGTACTTCTTGAAGTTCCTAGAATGCATGCTGGTGTTATACATAAATTCAGCAGAGAAAATGGTAAAAAGAATAGCCTTTGGAGACCAGAAGTTGATGACATTGATAGAAACCGTGTTATTTCAGAGAGAAGGCGAAGAGAAAAGATAAATGAGAGATTTATGCATCTTGCATCGATGCTGCCAACTAGTAGCAAGGTTGACAAAATATCACTACTCGATGAGACAATAGAATACATGAAAGAGCTTGAAAGGAGAGTTCAGGAGCTGGAGGCGAGATCAGCAAGACGATCAAATGATACTGCAGAGCAGACATCTGATAATTGTGGCACTAGCAAATTCAATGACATCAGGGGATCACTACCGAACAAAAGGAAGGCATGTGATATGGATGAAATAGAACCTGAAAGCTCCAATGGATTACTGAAATGTAGTTCAGCTGATAGTATTGTCATCAATATGATCGATAAGGAAGTCTCGATCAAGATGAGTTGTCTTTGGAGCGAGAGCTTGTTGCTTAAAATTATGGAGGCACTGACTGACCTACATATGGATTGCCATACAGTTCAGTCTTCCAACCTTGATGGGATTCTATCCATTGCTATCGAATCCAAGTCAACCGGATCGAAAACACTAGCAGTCGGAACAATTAGAGAAGCACTTCAGAGAGTAGTATGGAAATCTTGA
Protein Sequence
- >Solyc08g081140.4.1
MAMGHQDQDGVPGNLRKQLALAVRGIQWSYAIFWSTAVTQPGVLKWIDGYYNGDIKTRKTVQAGEVNEDQLGLHRTEQLKELYSSLLTSESEEDLQPQAKRPSASLSPEDLTDTEWYFLVCMSFVFNVGQGLPGKTLATNETVWLCNAHQAESKVFSRSLLAKSASIQTVVCFPYLGGVIELGVTELVTEDPNLIQQIKNSFLEVDYSVILKRPNYVSNDAKNDTNIGSQKPDHNALENDAYPVEINSPHDSSNGFVANQEAEDSLMVVDGIGETSQAQSWRFMDDNISNGANNSLNSSDCISQNNANCEKLSPLSSGEKETKPCPLDRQENDQKKPHLLDHQGDDAQYQAVLSTLLKSSDQLTLGPHFRNMNKKSSFASWKTDIQMPRFGTAQKLLKKVLLEVPRMHAGVIHKFSRENGKKNSLWRPEVDDIDRNRVISERRRREKINERFMHLASMLPTSSKVDKISLLDETIEYMKELERRVQELEARSARRSNDTAEQTSDNCGTSKFNDIRGSLPNKRKACDMDEIEPESSNGLLKCSSADSIVINMIDKEVSIKMSCLWSESLLLKIMEALTDLHMDCHTVQSSNLDGILSIAIESKSTGSKTLAVGTIREALQRVVWKS*