Gene Details:
- Gene ID: SolyC03g120910
- Gene Symbol: SlHB15A
- Gene Name: homeobox-leucine zipper protein ATHB-15
- Genome: Tomato Genome version SL4.0
- Species: Solanum lycopersicum
Functional Descriptions:
- The miR166–SlHB15A regulatory module controls ovule development and parthenocarpic fruit set under adverse temperatures in tomato.
- SlHB15A loss-of-function mutants display aberrant ovule development that mimics transcriptional changes occurring in fertilized ovules and leads to parthenocarpic fruit set under optimal and non-permissive temperatures, in field and greenhouse conditions.
- Knockdown of SlHB15A alleles by miR166 leads to a continuum of aberrant ovules correlating with parthenocarpic fruit set.
- Our findings demonstrate the role of SlHB15A as a sentinel to prevent fruit set in the absence of fertilization and provide a mean to enhance fruiting under extreme temperatures.
- The miR166-targeted SlHB15A gene is expressed in the ovule integument and directly regulates auxin and ethylene signaling to prevent fruit set in the absence of fertilization.
Function-related keywords:
Literature:
- The miR166-SlHB15A regulatory module controls ovule development and parthenocarpic fruit set under adverse temperatures in tomato. DOI: 10.1016/j.molp.2021.05.005 ; PMID: 33964458
- Guarding tomato fruit setting in adverse temperatures through the miRNA166-SlHB15A regulatory module. DOI: 10.1016/j.molp.2021.06.020 ; PMID: 34182155
Related News:
Gene Resources:
- NCBI ID: 101257548
- UniProt accessions: A0A3Q7FTR8
Sequences:
cDNA Sequence
- >Solyc03g120910.4.1
ATTGTTAACCAGTCCAAGATCCATCTTCTGATAATATCTCATCATGCCTACAAGATCTTCCTCTCTAGTCTTTGAAAATTTTGTAGGTGGTTCATGGGGTTGGTTTACTTTTTGTTGAAAAACTTAAAGATGCTTCAATTTTTGGGTACATGAAGAAGATCTGTTTCTGGGTTTGTGTGTTTTTTATCTTTTGAAGTCTAAAGCTTTGATCTTTTAGTGTTTCTCACACTTTTTTTTTTATCTTGTTTCAAGATTCAAAGGAAATGTTGTTAAAGATATTGTTTTTAAGTTCTTGAAGAATACTTTGATTCTTCTGTTTTTTTTTTTGGTAATGGTGAAAGATAAGTAAGGAAAGTGTGTATTTTTAGTAGTTTATTGTAAGCTCTGAAATCGAAAGATACAAGTTGTCTAGTGCCGTTTCAGTTTGGTAAATTGGTCTTCTCTTTTAGTATTACCAAGAAAAGGTCACTTCAAGACATTCTCATTTTGTTCAGAGCTCCCAATAAGAATAATGTTAAAAAAAGGTGAATTGTTGTGAAGACAAAAGTGAAGAAGAAGCAGAGTAACAGAGCTGGTTTTTTTTTCTCTCTCATTAAGGGCAAAGCATTCAAGTTTGTAAGATTTAAGAAAAAATGGCTTCCTGCAAGGATGGTAAGTCGGTGGTGTTGGATAACGGAAAGTATGTCCGGTATACACCTGAGCAGGTTGAAGCCCTTGAGAGGCTTTATCATGATTGTCCTAAACCAAGTTCAATGCGCCGTCAGCAGCTTATCAGAGAATGTCCTATCCTCTCTAACATTGAACCTAAGCAAATCAAAGTTTGGTTCCAGAATCGAAGATGCAGGGAGAAACAGAGGAAAGAGGCGTCAAGGCTTCAGTCTGTGAATAGGAAGCTGACGGCAATGAACAAGCTATTAATGGAAGAAAATGATAGACTACAGAAGCAAGTTTCTCAACTGGTGTATGAAAATGGCTACTTTCGCAGGCAAAGTCACAGTACTCCACTTGCTACGAAAGATACCAGTTGTGATTCAGTAGTGACTAGTGGTCAGCACCACTTGACATCTCAGCATCCGCCGAGGGATGCTAGTCCTGCAGGACTTTTGTCCATTGCAGAAGAAACTTTAACAGAGTTTCTTTCAAAGGCTACTGGAACTGCTGTTGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCATTGCTATTTCTCATGGTTGCACTGGCGTGGCAGCAAGAGCTTGTGGCCTGGTTGGTCTCGAGCCAACGAGGGTCTCCGAAATCCTTAAGGATCGACCTTCTTGGTATCGTGACTGCCGGGTTGTTGAAGTTCTCAATGTGCTGCCTACTGCCAATGGTGGAACCATTGAACTCCTTTACATGCAGCTTTATGCACCAACAACGTTGGCACCTGCCCGTGATTTCTGGCTCTTACGTTATACAACTGTTATGGATGATGGCAGTCTCGTGGTGTGTGAAAGGTCACTTGGAAATACTCAAAATGGTCCAAGTATGCCACCTGTTCAGAATTTTGTGAGAGCAGAAATCCTACCTAGTGGATATCTGATTAGACCTTGTGAGGGGGGTGGTTCAATTATCCACATTGTTGATCATATGAATTTAGAGGCATGGAGTGTGCCTGAAGTCTTACGCCCACTTTATGAGTCATCAGCAGTGCTAGCTCAGAAGACGACAGTGGCTGCACTACGCTACCTCCGGCAGATTGCACAGGAGGTTTCACAGACTAATGTTACTAACTGGGGAAGACGACCCGCAGCTCTACGTGCATTAAGCCAGAGGCTGAGCAGAGGCTTCAATGAGGCTCTTAATGGTATAGCTGATGAGGGCTGGTCAATGCTGGATAGTGATGGAATGGATGATGTTACCATCCTTGTGAACTCTTCTCCTGACAAGTTGATGGGCTTAAACCTTCCTTTTGCGAATGGATTTTCACCTATGAGCAACGCGGTTATGTGTGCAAAAGCATCAATGCTTCTACAGAATGTGCCTCCGGCTATTCTTCTCAGGTTCCTACGTGAACATCGATCTGAATGGGCAGACAACAATATAGATGCTTATGCTGCTGCAGCCATTAAAGTTGGTCCCTGCAGCTTACCTGGGGCTCGAGTTGGTAACTTCGGGGGTCAAGTGATACTTCCACTCGCTCACACTGTTGAGCATGAAGAGTTGCTGGAGGTCATTAAGTTGGAAGGTCATTCTCCTGAGGACGCGATAATGCCACGAGATATGTTTCTATTGCAACTATGCAGTGGAATGGATGAAAATGCTGTTGGAACTTGTGCCGAACTCGTGTTTGCTCCTATTGATGCCTCTTTTGCTGATGATGCACCATTGCTTCCGTCTGGGTTTCGCATTATTTCACTCGAGTCTGGAAAGGAAGCGTCCAGTCCAAATCGTACCCTTGATCTTACTTCTGCTCTTGAGACTGGCCCAGCGGAAAACAAAGCAGCCAATGATCTTCACACTAGTGGTGGCTCATCAAGATCTGTCATGACAATTGCTTTTCAATTTGCTTTTGAAAGCCACATGCAAGAGAGTGTTGCTTCAATGGCTCGACAGTATGTCCGAAGCATTATTTCATCTGTTCAAAGAGTTGCATTAGCACTTTCACCATCTCATTTGGGTTCTCATGGAGGTCTTCGTTTGCCATTGGGGACTCCTGAAGCACATACATTAGCTCGTTGGATCTGCCAAAGTTACAGGTGCTTTTTGGGCGTGGAGCTTCTCAAATTGAATACTGATCAAGGAAGTGAATCAATCCTCAAAAGCCTATGGCATCACTCAGATGCTATTATCTGCTGCTCCGCTAAGGCTTTGCCAGTTTTCACATTTGCAAATCAGGCTGGTCTTGACATGCTCGAGACAACCTTGGTTGCACTTCAAGATATTACCTTGGAGAAAATATTTGATGATCATGGAAAGAAGAACCTCTGCACTGAGTTCCCCCAGATAATGCAACAGGGTTTTGCATGTCTACAAGGGGGAATTTGCTTGTCAAGCATGAGCAGACCTATATCTTATGAGAGAGCAGTAGCATGGAAAGTTATGAATGAAGAAGATACTGCTCATTGCATCTGTTTCATGTTTGTCAACTGGTCATTTGTCTAAGTTACTGTTCTTTAGATCTGTTTTAAAGGGATCAGTACACTAATACCTAAGAACCCTTAAATATTTTCCTTTCAGAATCAACATTTTGAACTAGTTGTGTGTGTTGAAAACTTGTTTATTGTTAAAACTTATGCTACTCAGTACCTTTATGCTATGTATTTTTTAATCCCGTGCTTCTT
CDS Sequence
- >Solyc03g120910.4.1
ATGGCTTCCTGCAAGGATGGTAAGTCGGTGGTGTTGGATAACGGAAAGTATGTCCGGTATACACCTGAGCAGGTTGAAGCCCTTGAGAGGCTTTATCATGATTGTCCTAAACCAAGTTCAATGCGCCGTCAGCAGCTTATCAGAGAATGTCCTATCCTCTCTAACATTGAACCTAAGCAAATCAAAGTTTGGTTCCAGAATCGAAGATGCAGGGAGAAACAGAGGAAAGAGGCGTCAAGGCTTCAGTCTGTGAATAGGAAGCTGACGGCAATGAACAAGCTATTAATGGAAGAAAATGATAGACTACAGAAGCAAGTTTCTCAACTGGTGTATGAAAATGGCTACTTTCGCAGGCAAAGTCACAGTACTCCACTTGCTACGAAAGATACCAGTTGTGATTCAGTAGTGACTAGTGGTCAGCACCACTTGACATCTCAGCATCCGCCGAGGGATGCTAGTCCTGCAGGACTTTTGTCCATTGCAGAAGAAACTTTAACAGAGTTTCTTTCAAAGGCTACTGGAACTGCTGTTGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCATTGCTATTTCTCATGGTTGCACTGGCGTGGCAGCAAGAGCTTGTGGCCTGGTTGGTCTCGAGCCAACGAGGGTCTCCGAAATCCTTAAGGATCGACCTTCTTGGTATCGTGACTGCCGGGTTGTTGAAGTTCTCAATGTGCTGCCTACTGCCAATGGTGGAACCATTGAACTCCTTTACATGCAGCTTTATGCACCAACAACGTTGGCACCTGCCCGTGATTTCTGGCTCTTACGTTATACAACTGTTATGGATGATGGCAGTCTCGTGGTGTGTGAAAGGTCACTTGGAAATACTCAAAATGGTCCAAGTATGCCACCTGTTCAGAATTTTGTGAGAGCAGAAATCCTACCTAGTGGATATCTGATTAGACCTTGTGAGGGGGGTGGTTCAATTATCCACATTGTTGATCATATGAATTTAGAGGCATGGAGTGTGCCTGAAGTCTTACGCCCACTTTATGAGTCATCAGCAGTGCTAGCTCAGAAGACGACAGTGGCTGCACTACGCTACCTCCGGCAGATTGCACAGGAGGTTTCACAGACTAATGTTACTAACTGGGGAAGACGACCCGCAGCTCTACGTGCATTAAGCCAGAGGCTGAGCAGAGGCTTCAATGAGGCTCTTAATGGTATAGCTGATGAGGGCTGGTCAATGCTGGATAGTGATGGAATGGATGATGTTACCATCCTTGTGAACTCTTCTCCTGACAAGTTGATGGGCTTAAACCTTCCTTTTGCGAATGGATTTTCACCTATGAGCAACGCGGTTATGTGTGCAAAAGCATCAATGCTTCTACAGAATGTGCCTCCGGCTATTCTTCTCAGGTTCCTACGTGAACATCGATCTGAATGGGCAGACAACAATATAGATGCTTATGCTGCTGCAGCCATTAAAGTTGGTCCCTGCAGCTTACCTGGGGCTCGAGTTGGTAACTTCGGGGGTCAAGTGATACTTCCACTCGCTCACACTGTTGAGCATGAAGAGTTGCTGGAGGTCATTAAGTTGGAAGGTCATTCTCCTGAGGACGCGATAATGCCACGAGATATGTTTCTATTGCAACTATGCAGTGGAATGGATGAAAATGCTGTTGGAACTTGTGCCGAACTCGTGTTTGCTCCTATTGATGCCTCTTTTGCTGATGATGCACCATTGCTTCCGTCTGGGTTTCGCATTATTTCACTCGAGTCTGGAAAGGAAGCGTCCAGTCCAAATCGTACCCTTGATCTTACTTCTGCTCTTGAGACTGGCCCAGCGGAAAACAAAGCAGCCAATGATCTTCACACTAGTGGTGGCTCATCAAGATCTGTCATGACAATTGCTTTTCAATTTGCTTTTGAAAGCCACATGCAAGAGAGTGTTGCTTCAATGGCTCGACAGTATGTCCGAAGCATTATTTCATCTGTTCAAAGAGTTGCATTAGCACTTTCACCATCTCATTTGGGTTCTCATGGAGGTCTTCGTTTGCCATTGGGGACTCCTGAAGCACATACATTAGCTCGTTGGATCTGCCAAAGTTACAGGTGCTTTTTGGGCGTGGAGCTTCTCAAATTGAATACTGATCAAGGAAGTGAATCAATCCTCAAAAGCCTATGGCATCACTCAGATGCTATTATCTGCTGCTCCGCTAAGGCTTTGCCAGTTTTCACATTTGCAAATCAGGCTGGTCTTGACATGCTCGAGACAACCTTGGTTGCACTTCAAGATATTACCTTGGAGAAAATATTTGATGATCATGGAAAGAAGAACCTCTGCACTGAGTTCCCCCAGATAATGCAACAGGGTTTTGCATGTCTACAAGGGGGAATTTGCTTGTCAAGCATGAGCAGACCTATATCTTATGAGAGAGCAGTAGCATGGAAAGTTATGAATGAAGAAGATACTGCTCATTGCATCTGTTTCATGTTTGTCAACTGGTCATTTGTCTAA
Protein Sequence
- >Solyc03g120910.4.1
MASCKDGKSVVLDNGKYVRYTPEQVEALERLYHDCPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQSVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRRQSHSTPLATKDTSCDSVVTSGQHHLTSQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCTGVAARACGLVGLEPTRVSEILKDRPSWYRDCRVVEVLNVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTTVMDDGSLVVCERSLGNTQNGPSMPPVQNFVRAEILPSGYLIRPCEGGGSIIHIVDHMNLEAWSVPEVLRPLYESSAVLAQKTTVAALRYLRQIAQEVSQTNVTNWGRRPAALRALSQRLSRGFNEALNGIADEGWSMLDSDGMDDVTILVNSSPDKLMGLNLPFANGFSPMSNAVMCAKASMLLQNVPPAILLRFLREHRSEWADNNIDAYAAAAIKVGPCSLPGARVGNFGGQVILPLAHTVEHEELLEVIKLEGHSPEDAIMPRDMFLLQLCSGMDENAVGTCAELVFAPIDASFADDAPLLPSGFRIISLESGKEASSPNRTLDLTSALETGPAENKAANDLHTSGGSSRSVMTIAFQFAFESHMQESVASMARQYVRSIISSVQRVALALSPSHLGSHGGLRLPLGTPEAHTLARWICQSYRCFLGVELLKLNTDQGSESILKSLWHHSDAIICCSAKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGKKNLCTEFPQIMQQGFACLQGGICLSSMSRPISYERAVAWKVMNEEDTAHCICFMFVNWSFV*