Information report for SlGAMYB2
Gene Details
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Functional Descriptions
- microRNA159-targeted SlGAMYB transcription factors are required for fruit set in tomato.
- SlGAMYBs in regulating an agronomically important trait, namely fruit set.
- Pollination and the auxin pathway negatively regulate the miR159/SlGAMYB module.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 100037512
- UniProt accessions: A0A3Q7H2U6
- AlphaFoldDB: A0A3Q7H2U6
- EnsemblPlants: Solyc06g073640.3.1
- Gramene: Solyc06g073640.3.1
- GO: GO:0000976 , GO:0005634 , GO:0010597
- OMA: ESNCFGH
- InterPro: IPR001005 , IPR009057 , IPR017930
- PANTHER: PTHR47995 , PTHR47995:SF31
- SUPFAM: SSF46689
- PROSITE: PS50090 , PS51294
- Gene3D: 1.10.10.60
- OrthoDB: A0A3Q7H2U6
- Pfam: PF00249
- SMR: A0A3Q7H2U6
- CDD: cd00167
- STRING: 4081.A0A3Q7H2U6
Sequences
cDNA Sequence
- >Solyc06g073640.4.1
CAATTTTATATCCTTTACATTTGCCGTCACTATTATTTACTTCTTCAACCTTTTAGGATGAGTATGACAAGTGAAAGCGATGACAGGATGACATCACAAGACGGGGTGGATTCACCATCTGCCGAAGAAGCTTGTGGTGGAGGAAATACTGGAGGAGGTCTACCACTAAAAAAGGGCCCCTGGACTTCTGCAGAAGATGCAATTTTAGTGGAGTACGTCACGAAACATGGTGAGGGGAACTGGAATGCTGTCCAAAAGCACTCAGGACTTGCTCGGTGTGGTAAAAGTTGCCGTTTGCGATGGGCCAATCATCTGAGACCAGATCTAAAGAAAGGTGCATTCACTCCCGAGGAAGAGCGGCACATAATTGAATTGCATGCTAAGATGGGAAACAAATGGGCGCGAATGGCTGCTGAGTTGCCCGGGCGTACAGATAATGAGATAAAGAACTACTGGAATACCAGAATAAAGAGACGTCAGCGTGCAGGCTTGCCAATTTACCCTTCAGATATTTGTTTTCAGTCAATTACAGAAAACAAACAAAATGAGGAGTTGGGAACATTCTCCTCAGCAGATTCACAATATCCTGATTTCTTTCCAATGAATTATGAGATTCCAGCTGTGGAATTCAAAAGGTTGGAGTTCAATCAGCATTTGTGTCCACCAGCACTTCTTGATATTCCCACTGGTGGCATACTTGACATTCCTGGAAGAAGCCTGTTGGCACAGGGTCTTAATTCTGCTTATTACAGTCGGTCATTCCTCTCAACAACGCCTCCAGCCAAGCGTATACGAGGCTCAGAATCTCTGTTCTCTGGTTTAAATGGTGATTGTTCTCCATCAAAAAATGATGTTTCTTTTTCAACCTGCCATCAACATCAGGATGATGGTTCTTTGCTTGCTCAGTCCATGGGATTTTCGTCTTCATTTAATCAAAATCTAACATCTGATTATCACCCCTCATCCTTGGGTGTAATTCCTGGCAGCCATGCCCTTTTAAATGGCCACACCTCTTCTTCAGAGCCCTCATGGGCAAAGAAGCTCGAGCTCCCTTCACTCCAAAGTACGATTGCAAGTTGGGGCTTAGTTACTTCCCCTCTTCCTTCTCTTGATTCTGTCGACACTTTGATTCAGTCCCCTCCAACTGAGCATACTGAATCATGTAATCTGTCACCTAGGAACAGTGGTCTGTTGGACGCTGTACTTCATGAATCACAAACTATGAAAGCTTCAAAGAGTATCTTGCACCAGGAGAATTCTGGTGATGTGGTTGATAATTCATGTCCTGATCTCCACATGACTGAATGGGGACAACATGGTGATCCAATCTCCCCTTTAGGTCATTCTGCTGCATCGGTGTTTAGTGAATACACCCCTACTAGTGGAAGCTCATCAGAGGAGCCCCAATTAGTGACAATGCCAGCTTGCAAGGTTAAGCAGGAGAAGTTTGATTACGGACCCTATGATGGGAAGGACGATGCATCAAACCTTATCTGTCCCAGGCCAGACTTCTTGCTTGAGTCCAATTGTTTTGGTCATATGCAAAACACTGTAAGATCCATCTGGTACTGAAATACGACTCTGATCTTGTTGATGATTATACTCTATTAGCCAACACTATCTGGTCAAGGCTTGTGGACTTGGTTCTTGTGCATGGAGTGCCTTGTCTACACCATCTAGTCAATAAGCTCAACACGATTATGGTACTTTTTAATGCCTTGCAAACATTTTTGTGATGCAAACTTGGATTGTCGTGTCAGCTATTAAACGACTGATGTAATATTTTTTTTTTCATGTGAGATTGTCTTTAGATATTGAAACACAAAATACTGCTTGTTTGTATGCGGCATTAAATTGCCTCCACTGTGTTTGACCACGAATGCAACACAGCT
CDS Sequence
- >Solyc06g073640.4.1
CAATTTTATATCCTTTACATTTGCCGTCACTATTATTTACTTCTTCAACCTTTTAGGATGAGTATGACAAGTGAAAGCGATGACAGGATGACATCACAAGACGGGGTGGATTCACCATCTGCCGAAGAAGCTTGTGGTGGAGGAAATACTGGAGGAGGTCTACCACTAAAAAAGGGCCCCTGGACTTCTGCAGAAGATGCAATTTTAGTGGAGTACGTCACGAAACATGGTGAGGGGAACTGGAATGCTGTCCAAAAGCACTCAGGACTTGCTCGGTGTGGTAAAAGTTGCCGTTTGCGATGGGCCAATCATCTGAGACCAGATCTAAAGAAAGGTGCATTCACTCCCGAGGAAGAGCGGCACATAATTGAATTGCATGCTAAGATGGGAAACAAATGGGCGCGAATGGCTGCTGAGTTGCCCGGGCGTACAGATAATGAGATAAAGAACTACTGGAATACCAGAATAAAGAGACGTCAGCGTGCAGGCTTGCCAATTTACCCTTCAGATATTTGTTTTCAGTCAATTACAGAAAACAAACAAAATGAGGAGTTGGGAACATTCTCCTCAGCAGATTCACAATATCCTGATTTCTTTCCAATGAATTATGAGATTCCAGCTGTGGAATTCAAAAGGTTGGAGTTCAATCAGCATTTGTGTCCACCAGCACTTCTTGATATTCCCACTGGTGGCATACTTGACATTCCTGGAAGAAGCCTGTTGGCACAGGGTCTTAATTCTGCTTATTACAGTCGGTCATTCCTCTCAACAACGCCTCCAGCCAAGCGTATACGAGGCTCAGAATCTCTGTTCTCTGGTTTAAATGGTGATTGTTCTCCATCAAAAAATGATGTTTCTTTTTCAACCTGCCATCAACATCAGGATGATGGTTCTTTGCTTGCTCAGTCCATGGGATTTTCGTCTTCATTTAATCAAAATCTAACATCTGATTATCACCCCTCATCCTTGGGTGTAATTCCTGGCAGCCATGCCCTTTTAAATGGCCACACCTCTTCTTCAGAGCCCTCATGGGCAAAGAAGCTCGAGCTCCCTTCACTCCAAAGTACGATTGCAAGTTGGGGCTTAGTTACTTCCCCTCTTCCTTCTCTTGATTCTGTCGACACTTTGATTCAGTCCCCTCCAACTGAGCATACTGAATCATGTAATCTGTCACCTAGGAACAGTGGTCTGTTGGACGCTGTACTTCATGAATCACAAACTATGAAAGCTTCAAAGAGTATCTTGCACCAGGAGAATTCTGGTGATGTGGTTGATAATTCATGTCCTGATCTCCACATGACTGAATGGGGACAACATGGTGATCCAATCTCCCCTTTAGGTCATTCTGCTGCATCGGTGTTTAGTGAATACACCCCTACTAGTGGAAGCTCATCAGAGGAGCCCCAATTAGTGACAATGCCAGCTTGCAAGGTTAAGCAGGAGAAGTTTGATTACGGACCCTATGATGGGAAGGACGATGCATCAAACCTTATCTGTCCCAGGCCAGACTTCTTGCTTGAGTCCAATTGTTTTGGTCATATGCAAAACACTGTAAGATCCATCTGGTACTGA
Protein Sequence
- >Solyc06g073640.4.1
QFYILYICRHYYLLLQPFRMSMTSESDDRMTSQDGVDSPSAEEACGGGNTGGGLPLKKGPWTSAEDAILVEYVTKHGEGNWNAVQKHSGLARCGKSCRLRWANHLRPDLKKGAFTPEEERHIIELHAKMGNKWARMAAELPGRTDNEIKNYWNTRIKRRQRAGLPIYPSDICFQSITENKQNEELGTFSSADSQYPDFFPMNYEIPAVEFKRLEFNQHLCPPALLDIPTGGILDIPGRSLLAQGLNSAYYSRSFLSTTPPAKRIRGSESLFSGLNGDCSPSKNDVSFSTCHQHQDDGSLLAQSMGFSSSFNQNLTSDYHPSSLGVIPGSHALLNGHTSSSEPSWAKKLELPSLQSTIASWGLVTSPLPSLDSVDTLIQSPPTEHTESCNLSPRNSGLLDAVLHESQTMKASKSILHQENSGDVVDNSCPDLHMTEWGQHGDPISPLGHSAASVFSEYTPTSGSSSEEPQLVTMPACKVKQEKFDYGPYDGKDDASNLICPRPDFLLESNCFGHMQNTVRSIWY*