Information report for SlCYP707A2
Gene Details
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Functional Descriptions
- SlNCED1 and SlCYP707A2: key genes involved in ABA metabolism during tomato fruit ripening.
- ABA accumulation and SlNCED1transcript levels in the SlNCED1-RNAi-treated fruit were downregulated to 21% and 19% of those in control fruit, respectively, but upregulated in SlCYP707A2-RNAi-treated fruit.
- Silencing SlNCED1 or SlCYP707A2 by VIGS significantly altered the transcripts of a set of both ABA-responsive and ripening-related genes, including ABA-signalling genes (PYL1, PP2C1, and SnRK2.2), lycopene-synthesis genes (SlBcyc, SlPSY1 and SlPDS), and cell wall-degrading genes (SlPG1, SlEXP, and SlXET) during ripening.
- These data indicate that SlNCED1 and SlCYP707A2 are key genes in the regulation of ABA synthesis and catabolism, and are involved in fruit ripening as positive and negative regulators, respectively.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 101249565
- UniProt accessions: K4CI52
- EMBL: CM001071 , HQ008774
- AlphaFoldDB: K4CI52
- EnsemblPlants: Solyc08g005610.3.1
- Gramene: Solyc08g005610.3.1
- GO: GO:0005506 , GO:0009414 , GO:0009687 , GO:0009737 , GO:0009835 , GO:0010295 , GO:0016020 , GO:0016709 , GO:0020037 , GO:0046345
- OMA: WDGQFVN
- InterPro: IPR001128 , IPR002401 , IPR017972 , IPR036396
- PANTHER: PTHR24286 , PTHR24286:SF249
- SUPFAM: SSF48264
- PROSITE: PS00086
- Gene3D: 1.10.630.10
- OrthoDB: K4CI52
- Pfam: PF00067
- SMR: K4CI52
- CDD: cd11043
- STRING: 4081.K4CI52
- HOGENOM: CLU_001570_15_5_1
Sequences
cDNA Sequence
- >Solyc08g005610.3.1
ATATATACACCCTTTTGTGCTTTATTTCATTCATCAAACCATCTTAGTTTTAAAACTAGGTACACCTTACTAGCAACAAACAACACTTGGAAGTACCTACTTTTGGTACCTTTTAGTTCTAAACATGGAATTTGTTTCTATGTTGTGTTTGTTTACTTTCATTTCTTTAACTCTTCTTCTAATCCATTCTATCTTCAAATTCTTGGCCTTTGCTTCCAAGAAATTGCCACTTCCTCCTGGTACTTTAGGTTTACCTTATATTGGTGAAACCTTCCAACTCTACTCACAAAATCCCAATGTTTTCTTTGCTTCCAAAGTCAAAAAGTATGGTTCAATTTTCAAGACTTACATATTGGGTTGTCCTTGTGTAATGATATCAAGTCCAGAGGCAGCTAAACAAGTTTTGGTCACAAAGGCTAATTTGTTTAAGCCTACATTTCCTGCTAGCAAAGAAAGAATGCTGGGAAAACAAGCAATTTTCTTTCATCAAGGTGATTATCATGCCAAATTGAGAAAATTAGTCCTCCAGGCTTTCAAGCCCGATTCTATCAGAAACATCATCCCCGACATTGAATCCATCGCGATAACATCACTCGAATCATTTCAAGGAAGATTGATCAACACTTATCAAGAAATGAAGACATATACATTCAATGTGGCATTGATTTCGATATTTGGTAAAGATGAATTTCTATACAGAGAGGAGCTCAAGAAATGTTACTACATTCTCGAAAAAGGATACAATTCGATGCCAATTAATCTCCCCGGTACACTCTTCAACAAAGCAATGAAAGCGAGGAAAGAGCTAGCTAAAATCGTTGCCAAAATCATCTCGACTAGACGAGAAATGAAGATTGATCATGGCGATTTGCTCGGGTCATTCATGGGAGATAAAGAAGGACTCACTGACGAACAAATTGCAGATAATGTAATCGGAGTCATCTTTGCAGCTCGAGACACTACTGCTAGTGTTCTTACATGGATCCTCAAATACCTTGGAGAAAATCCCAGTGTCCTACAAGCTGTCACAGAAGAGCAAGAGAACATAATGAGAAAAAAAGAGGTGAATGGTGAAGAAAAAGTTTTAAATTGGCAAGATACAAGACAAATGCCAATGACAACAAGAGTTATTCAAGAAACACTTAGAGTTGCTTCAATTTTATCATTCACATTTAGAGAAGCTGTTGAAGATGTTGAATTTGAAGGATATTTAATACCTAAAGGATGGAAAGTATTACCACTCTTTAGGAATATTCATCATAGTCCAGACAATTTTCCTGAACCAGAGAAATTTGATCCTTCAAGATTTGAGGTGTCACCAAAACCCAATACATTCATGCCATTTGGCAATGGGGTCCACTCATGTCCAGGGAATGACTTAGCCAAGCTGGAGATTTTGATCCTTGTACATCATCTGACCACAAAGTACAGGTGGTCTATGGTGGGCCCACAAAATGGAATTCAGTATGGGCCATTTGCTCTTCCCCAAAATGGTTTACCCATTAAACTCTCTCTCAAAACATCATCAACATAACCCTAACAATCAATTTGAGATGAAAAAAAATTATAATATATATTTATTATACAAATATAAGTTTGGGATCTCACATAGAGGCCGGTCTAAAAGACGAGACAAATTAAGAAGGACGTCATACAAGTTTGATCAATCTGAATGTCACAATCATCATCAGGACAACAAACATCACACGAGCTTGACTAGTCCAAAAGGCATGATCAAGGACAAACACAAGCATTATACGAGGTTGATCAGTTCAAGAACCACGACTAGGCATTACACGAGCTTGATCAGTCCAAAAGGCGCGACCAAGACCTAGACAAGCACATAAGTTTGAGGACCTAAAATTGTAAATACAAAGAGTTCCCATAGTACTTGAGATATAGTACACCACAAAGGGTATGGTTCATTTTTTTTTTCCTTAAAGAAAAGGAGAAAAATAAGAAGGTAATTTATTAGTGTATCACATATAGTAATAGGAA
CDS Sequence
- >Solyc08g005610.3.1
ATGGAATTTGTTTCTATGTTGTGTTTGTTTACTTTCATTTCTTTAACTCTTCTTCTAATCCATTCTATCTTCAAATTCTTGGCCTTTGCTTCCAAGAAATTGCCACTTCCTCCTGGTACTTTAGGTTTACCTTATATTGGTGAAACCTTCCAACTCTACTCACAAAATCCCAATGTTTTCTTTGCTTCCAAAGTCAAAAAGTATGGTTCAATTTTCAAGACTTACATATTGGGTTGTCCTTGTGTAATGATATCAAGTCCAGAGGCAGCTAAACAAGTTTTGGTCACAAAGGCTAATTTGTTTAAGCCTACATTTCCTGCTAGCAAAGAAAGAATGCTGGGAAAACAAGCAATTTTCTTTCATCAAGGTGATTATCATGCCAAATTGAGAAAATTAGTCCTCCAGGCTTTCAAGCCCGATTCTATCAGAAACATCATCCCCGACATTGAATCCATCGCGATAACATCACTCGAATCATTTCAAGGAAGATTGATCAACACTTATCAAGAAATGAAGACATATACATTCAATGTGGCATTGATTTCGATATTTGGTAAAGATGAATTTCTATACAGAGAGGAGCTCAAGAAATGTTACTACATTCTCGAAAAAGGATACAATTCGATGCCAATTAATCTCCCCGGTACACTCTTCAACAAAGCAATGAAAGCGAGGAAAGAGCTAGCTAAAATCGTTGCCAAAATCATCTCGACTAGACGAGAAATGAAGATTGATCATGGCGATTTGCTCGGGTCATTCATGGGAGATAAAGAAGGACTCACTGACGAACAAATTGCAGATAATGTAATCGGAGTCATCTTTGCAGCTCGAGACACTACTGCTAGTGTTCTTACATGGATCCTCAAATACCTTGGAGAAAATCCCAGTGTCCTACAAGCTGTCACAGAAGAGCAAGAGAACATAATGAGAAAAAAAGAGGTGAATGGTGAAGAAAAAGTTTTAAATTGGCAAGATACAAGACAAATGCCAATGACAACAAGAGTTATTCAAGAAACACTTAGAGTTGCTTCAATTTTATCATTCACATTTAGAGAAGCTGTTGAAGATGTTGAATTTGAAGGATATTTAATACCTAAAGGATGGAAAGTATTACCACTCTTTAGGAATATTCATCATAGTCCAGACAATTTTCCTGAACCAGAGAAATTTGATCCTTCAAGATTTGAGGTGTCACCAAAACCCAATACATTCATGCCATTTGGCAATGGGGTCCACTCATGTCCAGGGAATGACTTAGCCAAGCTGGAGATTTTGATCCTTGTACATCATCTGACCACAAAGTACAGGTGGTCTATGGTGGGCCCACAAAATGGAATTCAGTATGGGCCATTTGCTCTTCCCCAAAATGGTTTACCCATTAAACTCTCTCTCAAAACATCATCAACATAA
Protein Sequence
- >Solyc08g005610.3.1
MEFVSMLCLFTFISLTLLLIHSIFKFLAFASKKLPLPPGTLGLPYIGETFQLYSQNPNVFFASKVKKYGSIFKTYILGCPCVMISSPEAAKQVLVTKANLFKPTFPASKERMLGKQAIFFHQGDYHAKLRKLVLQAFKPDSIRNIIPDIESIAITSLESFQGRLINTYQEMKTYTFNVALISIFGKDEFLYREELKKCYYILEKGYNSMPINLPGTLFNKAMKARKELAKIVAKIISTRREMKIDHGDLLGSFMGDKEGLTDEQIADNVIGVIFAARDTTASVLTWILKYLGENPSVLQAVTEEQENIMRKKEVNGEEKVLNWQDTRQMPMTTRVIQETLRVASILSFTFREAVEDVEFEGYLIPKGWKVLPLFRNIHHSPDNFPEPEKFDPSRFEVSPKPNTFMPFGNGVHSCPGNDLAKLEILILVHHLTTKYRWSMVGPQNGIQYGPFALPQNGLPIKLSLKTSST*