Information report for SlARF4
Gene Details
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Functional Descriptions
- The auxin response factor gene SlARF4, which was highly expressed in II, V and VI type trichomes, positively regulated the auxin-induced formation of II, V and VI type trichomes in the tomato leaves.
- SlARF4 overexpression plants with high densities of these trichomes exhibited tolerance to spider mites. Two R2R3 MYB genes, SlTHM1 and SlMYB52, were directly targeted and inhibited by SlARF4.
- SlARF4 is a repressor of auxin response and regulates the accumulation of chlorophyll and starch in tomato fruits.
- The regulation of SlARF4 on the formation of II, V and VI type trichomes depended on SlTHM1 and SlMYB52, which directly targeted cyclin gene SlCycB2 and increased its expression.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 778241
- UniProt accessions: Q2LAI9
- EMBL: DQ340259
- EnsemblPlants: Solyc11g069190.2.1
- Gramene: Solyc11g069190.2.1
- KEGG: sly:778241
- GO: GO:0003677 , GO:0005634 , GO:0006355 , GO:0009734
- OMA: WDEDIMS
- InterPro: IPR003340 , IPR010525 , IPR015300 , IPR044835 , IPR053793
- PANTHER: PTHR31384 , PTHR31384:SF102
- SUPFAM: SSF101936 , SSF54277
- PROSITE: PS50863 , PS51745
- Gene3D: 2.30.30.1040 , 2.40.330.10 , 3.10.20.90
- OrthoDB: Q2LAI9
- Pfam: PF02362 , PF06507
- SMR: Q2LAI9
- CDD: cd10017
- STRING: 4081.Q2LAI9
- HOGENOM: CLU_002626_2_2_1
Sequences
cDNA Sequence
- >Solyc11g069190.2.1
ATGGAAATTGATCTGAATCATGCATTAGTGAGTGAAGTGGAGAAGAATGTATGTTGTAATGAAGAATGTGATAAAGGGGGTGGTGGGGGTTGTGTTAATTGCTCTTTGTACACTTCCACTACTTCTTCTTGTTCTTCAAATGTATCTTCATCTTCTTCACTTGCTCTTACCTCAATTTATAAAGAGCTTTGGCATGCTTGTGCTGGTCCTCTTACTAGTTTACCCAAGAAAGGAAATGTAGTGGTTTATTTCCCTCAAGGTCATATGGAAGAAGCTGTTTCTGCTTTTCCATTTTCACCTGTCAAGATTGATTTACCAACTTTTGGTCTTCAGCCTCAGATCTTCTGTAGAGTGGAAGATGTCCAATTGCTTGCAAATAAGGAAAATGATGAGGTGTATACACAGCTCACTCTTCTTCCTCTTCCAGAGTCAATGGCTATAAGCTTAGAGGGGAAAGAACATGAAGATTCGGGGACGGATGAGGAAGGGAATGGAGTCAATCCAGGGAAATCAGCTTCTCACATGTTCTGTAAAACGCTGACTGCTTCGGATACCACCACCCATGGTGGCTTTTCAGTTCCCCGTCGAGCAGCTGAAGACTGCTTCCCCCCTCTGGATTACAAAGAGCAAAGACCCTCACAGGAGCTAATTGCTAAGGATCTGCACGGAGTAGAGTGGAAATTTCGTCACATTTATAGAGGCCAGCCAAGGCGACATTTGCTCACTACTGGATGGAGTATCTTTGTCAGCCAAAAGAATCTTGTCTCAGGGGATGCAGTTCTCTTCTTGAGGGGAGAAGGTGGAAATCTCAGACTGGGAATAAGAAGAGCTGCAAGACCTAGAAATGGGCTTCCTGAATCGATAATCAAAAGTCAATATTCTGGACCGGATGTTCTTTCGTCAGTTGCTACAGCCCTATCAGCAAAGAGCACTTTCCATGTTTTCTATAGCCCAAGGGCAAGTCATGCTGATTTCGTTGTACCTTACCAAAAGTACGTGAAAGCCATCAACTCTCGGATTCCTGTTGGGACAAGATTTAAAATGAAATTTGATTTGGATGATTCACCTGAAAGAAGGTACAGCGGTGTAGTGACTGGGATAAGCGATATGGATCCCTTTAGATGGCCCAACTCTAAATGGAGATGCTTGATGGTCAGATGGGATGAAGATATAATGAGTAATCATCAGGAACGGGTTTCTCCTTGGGAAATTGATTCTTCAGTTTCCTTACCACCACTGAGCATTCAGTCCTCACCAAGACTGAAGAAACTGCGGACTAGTCAGCAGGCACCATCAGTACTGGACAGCCATTTTGCTGGAGGGAGTGCTCTTTTAGACTTTGAGGAGTCAATAAGATCCTCCAAGGTCTTGCAAGGTCAAGAAAATTTAGGTCTGATATCACCTCCCTATGGTTGTGATAAACCAGTCCGCCCACTGGATTTCGAGCTGCAAAGAGTAGCTCGTCACAATCTCATGCCAAATGGTGTAGAGAACATTATTGTTGGTGACTTTGTGAAAACTCAGCCTCCAACAACCTACACAGGCTTTCTGGAATCCAATAGGTTTCCAAAGGTCTTGCAAGGTCAAGAAATTTGCTCGTTGAGATCCCTTACTGGAAAAGGTGATGTTAATTTTGGTGCTTGGGGAAAACCTGAATTTGGTTGCAATGTTTTCGGCACATATCAGAGGCCGAGAGCCAATTTCTATCCTCTCGCTTCTGAAGGGGCGAGGAATGTGTTTTTACCTTACAATGCGATGTATAGAGCTGGACAAGATCCCGTGGTTCCCTCCTACAGTACTAATTTCCAAAGAGAAAATCCTACCTTGAACCAGAATTCAATCCAAAATGTGGTTAGGAGGGAAGAAGTTGGAATGCCAAAGTTTGTAAATGAGCAGAGGCCACCGGAGATGTCTAAAGTGTCCATTCCAGAGAACCATTTCAAGAATGAAAATGACGACTCCTTCAATGCACAGGCTCCATGTAAACTGTTTGGCTTTTCCTTGACGAAAGAACCATCTACTCCTAGCTCGCAGAGTTCTGGTAAGAGGAGCTGTACTAAGGTTCACAAACAAGGCAGCTTGGTTGGACGAGCCATTGATCTCTCGAGATTGAATGGCTATGACGACTTGCTGGTTGAGTTGGAGAGGCTTTTCAACATGGAAGACCTCTTAAGAGATCCCAACAAGGGGTGGCGAATCTTGTACACTGACAGTGAGAATGACATGATGGTTGTCGGAGATGATCCATGGCATGAGTTCTGTGAGGTAGTATCCAAGATCCATATATACACTCAAGAAGAAGTGGAGAAAATGACTATTGAGGGGATCAGCGATGACACTCAAAGTTGTTTGGAGGAGGCACCAGCAATCATGGATGTCTCAAAGTCTTCTTCAGTTGGCCAGCCTGATTCATCTCCAACTGTAATCAGGATTTGAATAAAGTTTGAATGGAGTACCTATGA
CDS Sequence
- >Solyc11g069190.2.1
ATGGAAATTGATCTGAATCATGCATTAGTGAGTGAAGTGGAGAAGAATGTATGTTGTAATGAAGAATGTGATAAAGGGGGTGGTGGGGGTTGTGTTAATTGCTCTTTGTACACTTCCACTACTTCTTCTTGTTCTTCAAATGTATCTTCATCTTCTTCACTTGCTCTTACCTCAATTTATAAAGAGCTTTGGCATGCTTGTGCTGGTCCTCTTACTAGTTTACCCAAGAAAGGAAATGTAGTGGTTTATTTCCCTCAAGGTCATATGGAAGAAGCTGTTTCTGCTTTTCCATTTTCACCTGTCAAGATTGATTTACCAACTTTTGGTCTTCAGCCTCAGATCTTCTGTAGAGTGGAAGATGTCCAATTGCTTGCAAATAAGGAAAATGATGAGGTGTATACACAGCTCACTCTTCTTCCTCTTCCAGAGTCAATGGCTATAAGCTTAGAGGGGAAAGAACATGAAGATTCGGGGACGGATGAGGAAGGGAATGGAGTCAATCCAGGGAAATCAGCTTCTCACATGTTCTGTAAAACGCTGACTGCTTCGGATACCACCACCCATGGTGGCTTTTCAGTTCCCCGTCGAGCAGCTGAAGACTGCTTCCCCCCTCTGGATTACAAAGAGCAAAGACCCTCACAGGAGCTAATTGCTAAGGATCTGCACGGAGTAGAGTGGAAATTTCGTCACATTTATAGAGGCCAGCCAAGGCGACATTTGCTCACTACTGGATGGAGTATCTTTGTCAGCCAAAAGAATCTTGTCTCAGGGGATGCAGTTCTCTTCTTGAGGGGAGAAGGTGGAAATCTCAGACTGGGAATAAGAAGAGCTGCAAGACCTAGAAATGGGCTTCCTGAATCGATAATCAAAAGTCAATATTCTGGACCGGATGTTCTTTCGTCAGTTGCTACAGCCCTATCAGCAAAGAGCACTTTCCATGTTTTCTATAGCCCAAGGGCAAGTCATGCTGATTTCGTTGTACCTTACCAAAAGTACGTGAAAGCCATCAACTCTCGGATTCCTGTTGGGACAAGATTTAAAATGAAATTTGATTTGGATGATTCACCTGAAAGAAGGTACAGCGGTGTAGTGACTGGGATAAGCGATATGGATCCCTTTAGATGGCCCAACTCTAAATGGAGATGCTTGATGGTCAGATGGGATGAAGATATAATGAGTAATCATCAGGAACGGGTTTCTCCTTGGGAAATTGATTCTTCAGTTTCCTTACCACCACTGAGCATTCAGTCCTCACCAAGACTGAAGAAACTGCGGACTAGTCAGCAGGCACCATCAGTACTGGACAGCCATTTTGCTGGAGGGAGTGCTCTTTTAGACTTTGAGGAGTCAATAAGATCCTCCAAGGTCTTGCAAGGTCAAGAAAATTTAGGTCTGATATCACCTCCCTATGGTTGTGATAAACCAGTCCGCCCACTGGATTTCGAGCTGCAAAGAGTAGCTCGTCACAATCTCATGCCAAATGGTGTAGAGAACATTATTGTTGGTGACTTTGTGAAAACTCAGCCTCCAACAACCTACACAGGCTTTCTGGAATCCAATAGGTTTCCAAAGGTCTTGCAAGGTCAAGAAATTTGCTCGTTGAGATCCCTTACTGGAAAAGGTGATGTTAATTTTGGTGCTTGGGGAAAACCTGAATTTGGTTGCAATGTTTTCGGCACATATCAGAGGCCGAGAGCCAATTTCTATCCTCTCGCTTCTGAAGGGGCGAGGAATGTGTTTTTACCTTACAATGCGATGTATAGAGCTGGACAAGATCCCGTGGTTCCCTCCTACAGTACTAATTTCCAAAGAGAAAATCCTACCTTGAACCAGAATTCAATCCAAAATGTGGTTAGGAGGGAAGAAGTTGGAATGCCAAAGTTTGTAAATGAGCAGAGGCCACCGGAGATGTCTAAAGTGTCCATTCCAGAGAACCATTTCAAGAATGAAAATGACGACTCCTTCAATGCACAGGCTCCATGTAAACTGTTTGGCTTTTCCTTGACGAAAGAACCATCTACTCCTAGCTCGCAGAGTTCTGGTAAGAGGAGCTGTACTAAGGTTCACAAACAAGGCAGCTTGGTTGGACGAGCCATTGATCTCTCGAGATTGAATGGCTATGACGACTTGCTGGTTGAGTTGGAGAGGCTTTTCAACATGGAAGACCTCTTAAGAGATCCCAACAAGGGGTGGCGAATCTTGTACACTGACAGTGAGAATGACATGATGGTTGTCGGAGATGATCCATGGCATGAGTTCTGTGAGGTAGTATCCAAGATCCATATATACACTCAAGAAGAAGTGGAGAAAATGACTATTGAGGGGATCAGCGATGACACTCAAAGTTGTTTGGAGGAGGCACCAGCAATCATGGATGTCTCAAAGTCTTCTTCAGTTGGCCAGCCTGATTCATCTCCAACTGTAATCAGGATTTGA
Protein Sequence
- >Solyc11g069190.2.1
MEIDLNHALVSEVEKNVCCNEECDKGGGGGCVNCSLYTSTTSSCSSNVSSSSSLALTSIYKELWHACAGPLTSLPKKGNVVVYFPQGHMEEAVSAFPFSPVKIDLPTFGLQPQIFCRVEDVQLLANKENDEVYTQLTLLPLPESMAISLEGKEHEDSGTDEEGNGVNPGKSASHMFCKTLTASDTTTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGEGGNLRLGIRRAARPRNGLPESIIKSQYSGPDVLSSVATALSAKSTFHVFYSPRASHADFVVPYQKYVKAINSRIPVGTRFKMKFDLDDSPERRYSGVVTGISDMDPFRWPNSKWRCLMVRWDEDIMSNHQERVSPWEIDSSVSLPPLSIQSSPRLKKLRTSQQAPSVLDSHFAGGSALLDFEESIRSSKVLQGQENLGLISPPYGCDKPVRPLDFELQRVARHNLMPNGVENIIVGDFVKTQPPTTYTGFLESNRFPKVLQGQEICSLRSLTGKGDVNFGAWGKPEFGCNVFGTYQRPRANFYPLASEGARNVFLPYNAMYRAGQDPVVPSYSTNFQRENPTLNQNSIQNVVRREEVGMPKFVNEQRPPEMSKVSIPENHFKNENDDSFNAQAPCKLFGFSLTKEPSTPSSQSSGKRSCTKVHKQGSLVGRAIDLSRLNGYDDLLVELERLFNMEDLLRDPNKGWRILYTDSENDMMVVGDDPWHEFCEVVSKIHIYTQEEVEKMTIEGISDDTQSCLEEAPAIMDVSKSSSVGQPDSSPTVIRI*