Gene Details:

Functional Descriptions:

  • A typical NLR gene, Sl5R-1 , which regulates Tomato spotted wilt virus resistance, was fine mapped to a region less than 145 kb in the tomato genome.
  • Sl5R-1 is a key gene in the regulation of TSWV resistance.
  • The qRT-PCR and virus-induced gene silencing approach results confirmed that Sl5R-1 is a functional resistance gene for TSWV.
  • Analysis of the Sl5R-1 promoter region revealed that there is a SlTGA9 transcription factor binding site caused by a base deletion in resistant plants, and its expression level was significantly up-regulated in infected resistant plants.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >Solyc05g009740.1.1
    ATGGAGAAGATCGAGCTAACTACTTCTTTTTCATCGAATGATGAGGAATTTGTGGGGTTTAAGGAGGATGTAAAACAGATCATTCAGAAATTGACTCGAGGAACAAAAGAACGCGAAGTTATATCAATTGTTGGAATGGCAGGACTAGGCAAAACAACTTTGGCTAGAAAGGTGTACAACAGTCATTCTATTGCTGAACACTTTGATGCTCGCGCATTTTGTATTGTTTCACAAACATATAGCACCAGAAAGCTATTGATTGATATTCTTAAACAAGTCACTGGTGAAAAACATGACATGATCCGAGAGGATGAGGACGTTGCAGATATGTTGAGGAAGGAACTCTATTTCAAGAGATACCTCATTGTTTTAGATGATATGTGGAAATATCAGACATGGGAAGACTTGCAATTATGTTTCCCTTGTGTGGGAAGAGGAAGTAGAATTATGGTAACAACCCGCGTTCAAGAGGTTGCTACTAAGATGAGTGATACTTATTCTCTTCGATTCCTAACAGATGAAGAGAGTTGGGAGTTATTGCAAAAGAAGGTATTTAAACGCGGGAGGGTTCCCTTAGAGCTAAAAGAAGCAGGATTTGAAGTTGCTCGAAACTGTAAGGGACTGCCTCTTGTGATTGTGTTGAATGCTGGTATTATCGCACAAAAGGAAAGGTGTGTCTCCGTGTGGGAAGAGTTTGCAAAGGATTTAAGTTCTCTTGGTTTAGAAGAGCAGAGTAGGAAGGCAGTTCAATCAAGCTATGACTATTTACGCGATCATCTAAAGCATTGTCTTCTATACGTTGGATACTTCCCCGAAGACTACAACATTCCAGTCTCCGATTTGCTAAACTTATGGATAGCTGAAGAGTTAGTACCCAACATCAACGACACGGAGAACCTAGAAAAATCATCTAAAGATTGCTTGATTGATCTAGTCAATAGAAGCCTTCTAATAGTTTCTAAAAGGCGATCAAATGGTGATATAAAATACTGCATGGTTCATGATCTGATTCGCGAGTTTTGCTCAAGGGAACTTGAAGAAGAAGATTTTAAACAACGATTTGAGTCATACAACTCATCCTCTGAAGTACCTTCGTCTCCCAATGATCCAGCTCGGCTATGCATGTATATCCATGACAACCTTGTTAATCATTTGGAGTTGAACGGATATTCACTGAATGGGATCTCCGAAGAAAAGGAGTCTCTTGAATTCATTGCTCATCCGCGATTCTATTCATCAAAATGTATGGATCTTTTCTCTCTACTTCATAAGTTGAGGCTTATTAGGGTGTTGCATTTGTTGGATATCAATATGGAAAGTAGTTGGGAATTTCAAAAATCTCCGGCTTCCGCACTTGAATCACTCACTCACTTGAAATACCTCGCGATTTTTGTCAAAAAATTTGACTTCAAGTGGGTGTCGCACATGATCAATCTACAAACTTTACGTGTTCATTCACATCAACGTATAAAGACATCACCGGACATTTGGAAAATGAAGAAGCTAAGGCATGTTGATATTAGTGAATTTTCCTTTTTATGGGTAGACGATGAGCAAGAAAAATCTTCGCAACATGTTCTGTTAGACAACTTAAAGACTTTTGGCAAATGCCGTGTATCTCTTGCTGATATGAATCGTAAGTTCTGGTGGAGGTTTCCGAATCTTGAAGAACTCAGTCTCTCCGTTGTTAATTTTCATGGCATGCCTAACCATTCTCTGTTTCCTACACCGGAAATTCATAACCGCCTTCAATCTCTTGAAATAAGTTTCCCCATTGGATTATCAACGCCAACCGGAGGGTTCAAATCAGTTTTCCCTATGAATATGAGGTTGTTATCACTTGCTGGCATCTCATTGACAGAACAAGTGGTTACAAGTATTGCAGCATTGCAAAAACTTGAGACTCTCAAGTTATTTTTTATACATTTCCCCAACAACAATACGCGATGGGATGTTACTGATCGAGAGTTCAAAGTCTTGAAATATTTGAAACTAGAGCTAGTCGATATGAATCAATGGGAGGCCTCGGATACATCATTTCCCATGCTTGAGAAACTCGTCATAAAAGATTGTGAACAACTTGAGGAGATTCCTTCTAGCTTCGCGGATATTTCAACACTACGATTGATTAAATTGATCAATTGTAGTGAGTCAGTTCGCGAGTCAGCTCAAAGAATTAAACGGGATGTAGAAGACACTGAAGGAGTTGAGAGACTCCAACTTCATATCCCCAAGAACTACTAA
CDS Sequence
  • >Solyc05g009740.1.1
    ATGGAGAAGATCGAGCTAACTACTTCTTTTTCATCGAATGATGAGGAATTTGTGGGGTTTAAGGAGGATGTAAAACAGATCATTCAGAAATTGACTCGAGGAACAAAAGAACGCGAAGTTATATCAATTGTTGGAATGGCAGGACTAGGCAAAACAACTTTGGCTAGAAAGGTGTACAACAGTCATTCTATTGCTGAACACTTTGATGCTCGCGCATTTTGTATTGTTTCACAAACATATAGCACCAGAAAGCTATTGATTGATATTCTTAAACAAGTCACTGGTGAAAAACATGACATGATCCGAGAGGATGAGGACGTTGCAGATATGTTGAGGAAGGAACTCTATTTCAAGAGATACCTCATTGTTTTAGATGATATGTGGAAATATCAGACATGGGAAGACTTGCAATTATGTTTCCCTTGTGTGGGAAGAGGAAGTAGAATTATGGTAACAACCCGCGTTCAAGAGGTTGCTACTAAGATGAGTGATACTTATTCTCTTCGATTCCTAACAGATGAAGAGAGTTGGGAGTTATTGCAAAAGAAGGTATTTAAACGCGGGAGGGTTCCCTTAGAGCTAAAAGAAGCAGGATTTGAAGTTGCTCGAAACTGTAAGGGACTGCCTCTTGTGATTGTGTTGAATGCTGGTATTATCGCACAAAAGGAAAGGTGTGTCTCCGTGTGGGAAGAGTTTGCAAAGGATTTAAGTTCTCTTGGTTTAGAAGAGCAGAGTAGGAAGGCAGTTCAATCAAGCTATGACTATTTACGCGATCATCTAAAGCATTGTCTTCTATACGTTGGATACTTCCCCGAAGACTACAACATTCCAGTCTCCGATTTGCTAAACTTATGGATAGCTGAAGAGTTAGTACCCAACATCAACGACACGGAGAACCTAGAAAAATCATCTAAAGATTGCTTGATTGATCTAGTCAATAGAAGCCTTCTAATAGTTTCTAAAAGGCGATCAAATGGTGATATAAAATACTGCATGGTTCATGATCTGATTCGCGAGTTTTGCTCAAGGGAACTTGAAGAAGAAGATTTTAAACAACGATTTGAGTCATACAACTCATCCTCTGAAGTACCTTCGTCTCCCAATGATCCAGCTCGGCTATGCATGTATATCCATGACAACCTTGTTAATCATTTGGAGTTGAACGGATATTCACTGAATGGGATCTCCGAAGAAAAGGAGTCTCTTGAATTCATTGCTCATCCGCGATTCTATTCATCAAAATGTATGGATCTTTTCTCTCTACTTCATAAGTTGAGGCTTATTAGGGTGTTGCATTTGTTGGATATCAATATGGAAAGTAGTTGGGAATTTCAAAAATCTCCGGCTTCCGCACTTGAATCACTCACTCACTTGAAATACCTCGCGATTTTTGTCAAAAAATTTGACTTCAAGTGGGTGTCGCACATGATCAATCTACAAACTTTACGTGTTCATTCACATCAACGTATAAAGACATCACCGGACATTTGGAAAATGAAGAAGCTAAGGCATGTTGATATTAGTGAATTTTCCTTTTTATGGGTAGACGATGAGCAAGAAAAATCTTCGCAACATGTTCTGTTAGACAACTTAAAGACTTTTGGCAAATGCCGTGTATCTCTTGCTGATATGAATCGTAAGTTCTGGTGGAGGTTTCCGAATCTTGAAGAACTCAGTCTCTCCGTTGTTAATTTTCATGGCATGCCTAACCATTCTCTGTTTCCTACACCGGAAATTCATAACCGCCTTCAATCTCTTGAAATAAGTTTCCCCATTGGATTATCAACGCCAACCGGAGGGTTCAAATCAGTTTTCCCTATGAATATGAGGTTGTTATCACTTGCTGGCATCTCATTGACAGAACAAGTGGTTACAAGTATTGCAGCATTGCAAAAACTTGAGACTCTCAAGTTATTTTTTATACATTTCCCCAACAACAATACGCGATGGGATGTTACTGATCGAGAGTTCAAAGTCTTGAAATATTTGAAACTAGAGCTAGTCGATATGAATCAATGGGAGGCCTCGGATACATCATTTCCCATGCTTGAGAAACTCGTCATAAAAGATTGTGAACAACTTGAGGAGATTCCTTCTAGCTTCGCGGATATTTCAACACTACGATTGATTAAATTGATCAATTGTAGTGAGTCAGTTCGCGAGTCAGCTCAAAGAATTAAACGGGATGTAGAAGACACTGAAGGAGTTGAGAGACTCCAACTTCATATCCCCAAGAACTACTAA
Protein Sequence
  • >Solyc05g009740.1.1
    MEKIELTTSFSSNDEEFVGFKEDVKQIIQKLTRGTKEREVISIVGMAGLGKTTLARKVYNSHSIAEHFDARAFCIVSQTYSTRKLLIDILKQVTGEKHDMIREDEDVADMLRKELYFKRYLIVLDDMWKYQTWEDLQLCFPCVGRGSRIMVTTRVQEVATKMSDTYSLRFLTDEESWELLQKKVFKRGRVPLELKEAGFEVARNCKGLPLVIVLNAGIIAQKERCVSVWEEFAKDLSSLGLEEQSRKAVQSSYDYLRDHLKHCLLYVGYFPEDYNIPVSDLLNLWIAEELVPNINDTENLEKSSKDCLIDLVNRSLLIVSKRRSNGDIKYCMVHDLIREFCSRELEEEDFKQRFESYNSSSEVPSSPNDPARLCMYIHDNLVNHLELNGYSLNGISEEKESLEFIAHPRFYSSKCMDLFSLLHKLRLIRVLHLLDINMESSWEFQKSPASALESLTHLKYLAIFVKKFDFKWVSHMINLQTLRVHSHQRIKTSPDIWKMKKLRHVDISEFSFLWVDDEQEKSSQHVLLDNLKTFGKCRVSLADMNRKFWWRFPNLEELSLSVVNFHGMPNHSLFPTPEIHNRLQSLEISFPIGLSTPTGGFKSVFPMNMRLLSLAGISLTEQVVTSIAALQKLETLKLFFIHFPNNNTRWDVTDREFKVLKYLKLELVDMNQWEASDTSFPMLEKLVIKDCEQLEEIPSSFADISTLRLIKLINCSESVRESAQRIKRDVEDTEGVERLQLHIPKNY*