Gene Details:

Functional Descriptions:

  • Phenotypes Associated with Down-Regulation of Sl-IAA27 Support Functional Diversity Among Aux/IAA Family Members in Tomato.
  • Sl-IAA27 displays a distinct behavior compared with most Aux/IAA genes regarding the regulation of its expression by auxin, and the Sl-IAA27-encoded protein harbors a unique motif of unknown function also present in Sl-IAA9 and remarkably conserved in monocot and dicot species.
  • Silencing of Sl-IAA27 results in higher auxin sensitivity, altered root development and reduced Chl content in leaves. Both ovule and pollen display a dramatic loss of fertility in Sl-IAA27 down-regulated lines, and the internal anatomy of the flower and the fruit are modified, with an enlarged placenta in smaller fruits.
  • In line with the reduced Chl content in Sl-IAA27 RNA interference (RNAi) leaves, genes involved in Chl synthesis display lower expression at the level of transcript accumulation.
  • ven though Sl-IAA27 is closely related to Sl-IAA9 in terms of sequence homology and the encoded proteins share common structural features, the data indicate that the two genes regulate tomato fruit initiation and development in a distinct manner.

Literature:

Gene Resources:

Orthologs:

Sequences:

cDNA Sequence
  • >Solyc03g120500.4.1
    CTTTTCTGCATCAACAAAATTAAACAACCTCTTCCTTTCTCTTGTAACTTTTTCTTTAAAAAAAGTTTTTTTCTTTTTCATCTCTTCCATAGTTTCTTGAATTCTTGTAGAGAAATTCATCTTGTCTGTTTACTAATTTGTGCTCAACTTTCCATGTCTGTACCATTAGAACATGATTATATAGGTTTATCAGAACCTTCTTTAATGGAAAGAAGTTCTGATAAGATTTCTTCTTCTTCTTCTTCCTCTGTTCTAAACCTTAAGGAGACTGAGCTGAGACTTGGGTTGCCTGGTTCTGAGTCTCATGGGGTTTCTCTTTTTGGCAAAGATTTGGACCCTTTAAGCAATTTTACATCAAGAACAAAAAGGGGTTTTTCTGATGCAATTGATGCATCTGGAAAATCGGATTTGTCTATTAATTGCAGATCTGAAGCTGATAGGGAAAACGGGAACTTGTTGTTTTCCCCAAAAAGAGGGAATGGAGGTTCAAACCCTGTTGAAGAAAAAAAGCCTATCCCTCATACTTCAAAGGCACAAGTGGTAGGATGGCCACCAATTAGATCATTCAGGAAAAATACACTGGCTACTAAGAAAAATGATGATGAAGGGAGAACAGGTTCAAGTTGCCTTTATGTTAAGGTTAGCATGGATGGTGCTCCATATCTGAGGAAAGTTGATATCAAAACTTACAGTAACTATGCAGCGCTCTCATCAGCACTTGAAAAGATGTTCAGCTGCTTTAGTATTGGTCAGTGTGCCAGTGATAAGATTCCAGGGCAAGAGAAGCTCAGTGAAAGTCACTTGATGGATCTTCTCAATGGTTCTGAGTATGTGCTGACTTATGAGGACAAGGATGGTGATTGGATGCTAGTTGGCGATGTTCCTTGGGAGATGTTCATAGACTCATGCAAGAGATTGCGGATCATGAAGAGCTCAGAGGCAATTGGGCTAGCTCCAAGGGCCATAAATAAGTGCAAGAACCAAAATTAGTGACTGAAAGACTAACCGTCCAAAGGGTTTCTACAACGTCAACCATCCTTTTTCTGCCCTGTTTGTATCTGGAATTAGACTAGATGTGTAGCATCCCCTGAAAGGGAGAGAGCTGGTTTAAGAAAATATAACCGGTCAAAAATTGTACTGTGGCTAGTGTCTTTTGAGTGGCAATTTTTGCTTGCACATGCAACCTGCAAGTTTATTTGCAAACATACATTAATTTTTAAGCATATAACCAACCAACTATTATTCTGATGAAACA
CDS Sequence
  • >Solyc03g120500.4.1
    CTTTTCTGCATCAACAAAATTAAACAACCTCTTCCTTTCTCTTGTAACTTTTTCTTTAAAAAAAGTTTTTTTCTTTTTCATCTCTTCCATAGTTTCTTGAATTCTTGTAGAGAAATTCATCTTGTCTGTTTACTAATTTGTGCTCAACTTTCCATGTCTGTACCATTAGAACATGATTATATAGGTTTATCAGAACCTTCTTTAATGGAAAGAAGTTCTGATAAGATTTCTTCTTCTTCTTCTTCCTCTGTTCTAAACCTTAAGGAGACTGAGCTGAGACTTGGGTTGCCTGGTTCTGAGTCTCATGGGGTTTCTCTTTTTGGCAAAGATTTGGACCCTTTAAGCAATTTTACATCAAGAACAAAAAGGGGTTTTTCTGATGCAATTGATGCATCTGGAAAATCGGATTTGTCTATTAATTGCAGATCTGAAGCTGATAGGGAAAACGGGAACTTGTTGTTTTCCCCAAAAAGAGGGAATGGAGGTTCAAACCCTGTTGAAGAAAAAAAGCCTATCCCTCATACTTCAAAGGCACAAGTGGTAGGATGGCCACCAATTAGATCATTCAGGAAAAATACACTGGCTACTAAGAAAAATGATGATGAAGGGAGAACAGGTTCAAGTTGCCTTTATGTTAAGGTTAGCATGGATGGTGCTCCATATCTGAGGAAAGTTGATATCAAAACTTACAGTAACTATGCAGCGCTCTCATCAGCACTTGAAAAGATGTTCAGCTGCTTTAGTATTGGTCAGTGTGCCAGTGATAAGATTCCAGGGCAAGAGAAGCTCAGTGAAAGTCACTTGATGGATCTTCTCAATGGTTCTGAGTATGTGCTGACTTATGAGGACAAGGATGGTGATTGGATGCTAGTTGGCGATGTTCCTTGGGAGATGTTCATAGACTCATGCAAGAGATTGCGGATCATGAAGAGCTCAGAGGCAATTGGGCTAGCTCCAAGGGCCATAAATAAGTGCAAGAACCAAAATTAG
Protein Sequence
  • >Solyc03g120500.4.1
    LFCINKIKQPLPFSCNFFFKKSFFLFHLFHSFLNSCREIHLVCLLICAQLSMSVPLEHDYIGLSEPSLMERSSDKISSSSSSSVLNLKETELRLGLPGSESHGVSLFGKDLDPLSNFTSRTKRGFSDAIDASGKSDLSINCRSEADRENGNLLFSPKRGNGGSNPVEEKKPIPHTSKAQVVGWPPIRSFRKNTLATKKNDDEGRTGSSCLYVKVSMDGAPYLRKVDIKTYSNYAALSSALEKMFSCFSIGQCASDKIPGQEKLSESHLMDLLNGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKSSEAIGLAPRAINKCKNQN*