Gene Details:
- Gene ID: Solyc05g012020
- Gene Symbol: RIN-MC
- Gene Name: MADS-box transcription factor MADS-rin
- Genome: Tomato Genome version SL4.0
- Species: Solanum lycopersicum
Functional Descriptions:
- The RIN-MC Fusion of MADS-Box Transcription Factors Has Transcriptional Activity and Modulates Expression of Many Ripening Genes.
- The RIN-MC fusion gene was shown to be translated into a chimeric transcription factor that was localized to the nucleus and was capable of protein interactions with other MADS-box factors.
- These results indicated that tomato RIN-MC fusion plays a negative role in ripening and encodes a chimeric transcription factor that modulates the expression of many ripening genes, thereby contributing to the rin mutant phenotype.
Function-related keywords:
Literature:
- The RIN-MC Fusion of MADS-Box Transcription Factors Has Transcriptional Activity and Modulates Expression of Many Ripening Genes. DOI: 10.1104/pp.17.01449 ; PMID: 29133374
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >Solyc05g012020.4.1
ATATTATCGAAGCAAACATAAATGTCTAATTCAAGCCTCGATAAATGAAAAAAATAATCTAATTTGAACACCGCAACTTTCTTTTAAATGGGCCCTCCACGACACTAATCTAGATTAATCGAAATAATAAATTCTGAAATACCTCATGATATATAGTAAAACAAAAAAGTCTTTATTCTCTTTTCTTCTTGACTAGGGAACCATTAGATTTTAAAGACATTAAATCTATTACCCTTACCCTAAGAATAAGAAGATGTAAAGTAGAAGAGAAAACAACCAAAACCATATATATACATATATATAATTACATTATATTGTCTTATAACATATAGTCTTTTAAGGAAAAACAAATTTAGAAAAAAAATAATATTATTTTACATTTTTTTTTCTTCATACAATATGGGTAGAGGGAAAGTAGAATTGAAGAGAATTGAGAACAAAATAAATAGACAAGTTACCTTTGCAAAGAGAAGAAATGGACTCCTAAAGAAAGCTTATGAACTTTCTATACTTTGTGATGCTGAAATTGCTCTTATTATTTTCTCTAGTCGTGGCAAGCTTTATGAATTTTGCAGCAATTCAAGTATGTCCAAGACATTGGAGAGATACCACAGATACAATTATGGTACACTTGAAGGAACCCAAACTTCATCAGATTCACAGAACAACTACCAAGAGTATTTGAAGCTTAAAACAAGAGTGGAAATGTTACAACAGTCTCAAAGGCATTTGCTAGGTGAGGATTTGGGACAATTGGGCACAAAAGACTTGGAACAGCTTGAACGTCAATTGGATTCATCATTGAGGCAAATTAGGTCAACAAAGACACAACACATTCTTGATCAACTTGCTGAACTTCAACAAAAGGAACAATCTCTTACTGAAATGAACAAATCTTTGAGAATAAAGTTGGAAGAACTTGGTGTTACCTTTCAAACATCATGGCATTGTGGTGAGCAAAGTGTACAATATAGACATGAACAGCCTTCTCATCATGAGGGATTTTTTCAACATGTAAATTGCAATAATACATTGCCTATAAGTTACGGATACGATAATGTACAACCCGAAAATGCAGCACCATCAACACATGATGCTACTGGAGTTGTACCTGGATGGATGCTTTGAATTTGGAGTATATGGAGAGAAAAAATCCTCTTAGTTATACAAGTTATTTATTTTTATTAAAAAAATAAGTTAGATGGAGAATTATATATATCATACTTTAAAGAACTTATATTGTTTGAATGTTTTAGCTAGCAAACACTTTGGATTATATATAATATTGTGATATATTTATTGTCAAGAAGAGTATGGCAATATTGATAACACTATATTTTTGAATTACTATTTACTATTTTCCTTTTTATGTGTGTTCAAGTTGAGGCCACATGAATCCATTGGAGAAAATAAAAAAAAACTTTGAAAAAATTGGAGGTTGATATATTCATCTATTTTTCACGTTTGAGTTTAATTTTTTTTCTTCTAAAATTCTATTGTTTTGTTTAATACATGCACATTCATATATCAAAGATATTTTCATCGAATCCGCGATTGTTCAAAACCTTTTAGAAGGTTTTTATCGTATCGAATTTAATTATGATATCATACTAAATTAGATATTCAGATTCACCCAAATGAAAAAAAAAATACGCAATATAAACAAAATTTTGAAGAAGTACGTTT
CDS Sequence
- >Solyc05g012020.4.1
TATATATACATATATATAATTACATTATATTGTCTTATAACATATAGTCTTTTAAGGAAAAACAAATTTAGAAAAAAAATAATATTATTTTACATTTTTTTTTCTTCATACAATATGGGTAGAGGGAAAGTAGAATTGAAGAGAATTGAGAACAAAATAAATAGACAAGTTACCTTTGCAAAGAGAAGAAATGGACTCCTAAAGAAAGCTTATGAACTTTCTATACTTTGTGATGCTGAAATTGCTCTTATTATTTTCTCTAGTCGTGGCAAGCTTTATGAATTTTGCAGCAATTCAAGTATGTCCAAGACATTGGAGAGATACCACAGATACAATTATGGTACACTTGAAGGAACCCAAACTTCATCAGATTCACAGAACAACTACCAAGAGTATTTGAAGCTTAAAACAAGAGTGGAAATGTTACAACAGTCTCAAAGGCATTTGCTAGGTGAGGATTTGGGACAATTGGGCACAAAAGACTTGGAACAGCTTGAACGTCAATTGGATTCATCATTGAGGCAAATTAGGTCAACAAAGACACAACACATTCTTGATCAACTTGCTGAACTTCAACAAAAGGAACAATCTCTTACTGAAATGAACAAATCTTTGAGAATAAAGTTGGAAGAACTTGGTGTTACCTTTCAAACATCATGGCATTGTGGTGAGCAAAGTGTACAATATAGACATGAACAGCCTTCTCATCATGAGGGATTTTTTCAACATGTAAATTGCAATAATACATTGCCTATAAGTTACGGATACGATAATGTACAACCCGAAAATGCAGCACCATCAACACATGATGCTACTGGAGTTGTACCTGGATGGATGCTTTGA
Protein Sequence
- >Solyc05g012020.4.1
YIYIYIITLYCLITYSLLRKNKFRKKIILFYIFFSSYNMGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEIALIIFSSRGKLYEFCSNSSMSKTLERYHRYNYGTLEGTQTSSDSQNNYQEYLKLKTRVEMLQQSQRHLLGEDLGQLGTKDLEQLERQLDSSLRQIRSTKTQHILDQLAELQQKEQSLTEMNKSLRIKLEELGVTFQTSWHCGEQSVQYRHEQPSHHEGFFQHVNCNNTLPISYGYDNVQPENAAPSTHDATGVVPGWML*