Information report for RecQ4
Gene Details
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Functional Descriptions
- CRISPR/Cas inactivation of RecQ4 increases homeologous crossovers in an interspecific tomato hybrid.
- The positive effect of RecQ4 knockout on homeologous crossovers in a crop breeding intermediate.
- RecQ4 knockout results in increased frequency of ring bivalents in male meiocytes.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 101260976
- UniProt accessions: A0A3Q7EQ48
- AlphaFoldDB: A0A3Q7EQ48
- EnsemblPlants: Solyc01g103960.3.1
- Gramene: Solyc01g103960.3.1
- KEGG: sly:101260976
- GO: GO:0000724 , GO:0003677 , GO:0005524 , GO:0005634 , GO:0005694 , GO:0005737 , GO:0006260 , GO:0009378 , GO:0016787 , GO:0016853 , GO:0036121 , GO:0043138 , GO:0051276 , GO:0061749 , GO:0070417 , GO:0071215 , GO:1990518
- OMA: CTPQPSI
- InterPro: IPR001650 , IPR001763 , IPR002121 , IPR002464 , IPR004589 , IPR010997 , IPR011545 , IPR014001 , IPR018982 , IPR027417 , IPR032284 , IPR036388 , IPR044876
- PANTHER: PTHR13710 , PTHR13710:SF156
- SUPFAM: SSF47819 , SSF52540
- PROSITE: PS00690 , PS50206 , PS50967 , PS51192 , PS51194
- Gene3D: 1.10.10.10 , 1.10.150.80 , 3.40.50.300
- OrthoDB: A0A3Q7EQ48
- Pfam: PF00270 , PF00271 , PF00570 , PF09382 , PF16124
- SMR: A0A3Q7EQ48
- CDD: cd17920 , cd18794
- STRING: 4081.A0A3Q7EQ48
Sequences
cDNA Sequence
- >Solyc01g103960.3.1
AAACGTGAATAATGCCAGAATCGGGCCAAGCCCTATCTCGCTCGTGAAAACTATCCCGCCAATTCATCCCGCGTCTCGAAATTTGAAGCTTTCGGGCTGTATCCTCATTTCTTCGTTTCTCTTCCATATCGTGGCTGACAGGCCAACACCGTTTCGCCGGGGACTGATTCGCCGACGACGATAAAAGTCATACTTTACGGGAGGCTAATTCAGCTGGAGGTTCCATGTCTAAAGATAAGCTTCCAAAAGCCAACTGGACGCAACATGCTATTGCCCATGATAATTTTTCATGCCAAGATAAGTTCTTGAGTTCGAACATCCTTTTCTCTCTACCCACACAAAGACATTGTGCCAGAGATGAAATGAATGCCAGGTCAGTGACTTGTCATATCAGAAGTGTATCAAAATTGGAAGCTGAAAAGGCTTGGAAGCTTCTAACCAGCCTCAAGTTGTCTCCCAAGAGTTACACAAGACCAGGGAAAACTCCACAACTAACCAAAGATACCAATGCTTTCTCACAACACTCTAATCACACACAGTTCCCGCGTGCATCTGATGGAAACTGTGCTCCAGCGAGGTGCAGGCCAGTGCATCAAGGTGTTGGTGACGATGGTGAAAACAGTGACTCGAGAAGGTATGCAGGCAATTGTTTTCCACCACACTCAAGCGGTGTAGCAGAAACAGGGAACGTTGTGAACAGGCAGAGTGGAGTAGACAATTCACATGCTCGAGGTGTAGGGGAAATATCCAGCAGTCATGCAAATGGTGCAAGCAAGAAGACACGGGAGGTGTATACAACTTGTGCTGATGAAACTGAAGAAGATGACATTCTTCTGAATATAGATGTCGACCAAATAGTAGAACACTATCAGACCAACTGCACGCCACAGCCTTCTGTCTCCAGGTTCCCGTCAACTACTCCAGTTACAAAGTCTCAAAGTTTGGCTGGACACGAGGAGACAAATTTGCCACCAGAGTTGTCCATAAACTGCAACCACGGTTTGCAGCTAGGACTTTGCCCTGGAGCCCTGGATCATTTACAAGAGATGAAGGATAAGCTAATTGAGATTTCAAATGATCTTCTTGACAATGTTTCAGACCTGAGTTCAGAACAGATTGAAATGCTTCGCCAAGAGCGGTCACAGCTGAAGCTGCAAATTCAGCACCTCGAAAAATTTCTTCAAACTGTATCAGGCAACGAAGAAAGAAAGATGTCACAGTGTTCCGCTTCCACACTAACTTCTGCCTTTCAGTATGAAACACCTTCTGCCTTTCAGTATGCCACACCTTCTTCATTCCCTTCAAGGATTAATCCTACAAGACTCGACACACAGTTTAGTGGATACAATGAGTCCAGTCACTTTGACAACTGGAATTCATCATCACTTTCATTTGACGTGACTGGTGGAAATGGTCTTTCAACAGCCCCAGTGGAAAGAGAACCATACATCCCAAAGTATCTTGAAGTTAACTATATTGATGGTTCAAATGACAAGAAGTGGAGTTGCCGAGATTTCCCTTGGACAAAGAAGCTTGAGGCCAATAACAAAAAAGTATTTGGAAATCACTCTTTTCGTCCTAATCAACGAGAGGTGATAAATGCAACAATGAGCGGAAATGATGTGTTTGTTTTAATGCCAACAGGAGGAGGCAAAAGTCTGACATATCAGCTTCCTGGTCTTATTTGTCCTGGAATTACTTTGGTCATTTCACCTCTTGTTTCGCTCATCCAAGATCAGATAATGCATTTGCTGCAGGTTAACATACCTGCTGCTTATCTTAGTTCCAACATGGAGTGGACTGAGCAACAGGAGATACTTAGAGAGCTCAATTCAGATGGTTGCAAATACAAATTTTTATATGTTACCCCAGAGAAAGTTGCCAAAAGTGATGTTCTATTGAGACACTTGGAAAGTCTACATACTCGTGATACACTTGCAAGAATTGTTATTGATGAAGCACATTGCGTAAGCCAGTGGGGACATGATTTCAGGCCTGATTATCAGTGTTTAGGTATCCTGAAGCAAAAGTTCCCAACTGTGCCTGTTCTGGCCTTGACTGCTACTGCTACAATAAGTGTCAAGGAGGATGTTGTTCAGGCTCTTGGTCTTGCCAACTGCATTATTTTCCGACAAAGCTTCAATCGCCCAAATTTAAGATATACTGTTATCCCAAAGACAAAGAAGTGTTTGGAAGACATTGGCACTTTTATAAAGAATAATCATTTTGATCAATGCGGGATAATTTATTGTCTTTCTAGAATGGATTGTGAGAGAGTAGCAGAAAAGCTGCAGGAATACGGACATAAAGCAGCATTTTATCATGGCAGCATGGATGGTGCTCAACGAGCTAACATCCAGAAGCAGTGGAGCAAAGATGAGATCAATATTATATGTGCAACTATTGCGTTTGGAATGGGTATCAACAAGCCAAATGTTCGTTTTGTTATTCATCATTCTTTGCCAAAATCTATTGAAGGGTACCATCAGGAGTGTGGTCGTGCTGGTAGAGATGGTCTACCTTCCTCTTGTGTTCTGTACTACAGTTATAGTGATTATATACGAGTCAAGCATATGATCAGTCAAGGCACTGTAGAGCAGAGTCCCTTTGGGTCTGGATATGGTCGTTCAAATGTGGCAGCTTCAGGGAGGAACCTTGAGACGAACGTGGAAAATCTTCTAAGAATGGTTAGTTACTGTGAGAATGAAGTTGATTGTCGTCGTCTCCTTCAGCTTATTCACTTTGGCGAGAAATTCGAATCTACCAACTGCCGAAAAACATGTGATAATTGCTGCAAGACTCAGAACTGTATTGAGAAAGACGTCACTGAAGTTGCAAAGCAATTAGTTGAATTGGTGAAGACGACGGGACAAAAATTCTCGTCAGCCCATGTTTTGGAAGTCTTCAGGGGCTCCTTGAGCCAATATGTGAAGAAACACAGACACGAGTCCTTGCATCTGCATGGAGCTGGAAAGAAGCTAGCCAAGGGTGAAGCATCCCGCGTGCTACGTCATCTTGTTACTGAAGATATTCTTGTGGAGGATGTTAAAAAGAGTGACCTTTATGGATCCGTTTCATCAGTCCTAAAGGTGAATGAATCAAAGGCCTATAATCTATTTGCTGGTGGTCAGACGTTGAGATTAAGGTTCCCTTCATTTGTGAAGGCATCTAAACTGGGTAAATATGAAGCCACTCCAGCAAAAGGTTCACTAACATCAGGAAAGCAGAGTCCTCCAAGGACAGACCCTTCTGGTGTACCTCAATCTACATTTGATCCATCCCTTTCAGCGATACTATATTCAGCTCTACGGAAACTTCGTACTAATATTGTTAGGGAATCTGGAGATGGTGTCATGGCTCACCATATATTTGGAGATGACACCCTGCAGCTGATTGGCCAGAAAGTACCTAGAACTAAAAATGAGCTACTTGACATCAATGGAATTGGCAAGGTAAAAATCAACAAGTACGGGGATAATGTGCTGCAAACCATTGAAGCTACGGTCAGGGATTACTATAAGTCAGATAAGACGAGTAGCAGTGGCAATGACAATACTGATTCAGGTAAAAAGAGGAGAAATTCCATCAATGTACAAAACGGGAACTCCAAAGATGAAGAATTCTTCACTGAAAGCACTGGATGTACTAAGAAAAGGGTGTTAAAGAAGCAGAACAAACATGCTGAGGTTATTGATTATAGGGACCTTGGGTATTTTGATGAATGTATAGACGGTGACCTTGATTTCGATGAGACTATGATGCCTTAGTGAATGCTTCCTATTTCAAAAGTTGATCAGAATGAAAGAAGCTTTTTATGATCAACATCCCAGGTTGTATGGTTCGAAGTTAGCATCGCAGTTTGCATGGGTGAAAAGTTTATGATCATCACACTGTTCTTATTAATTTGGGTGAAATGTAAATCTGTTAACAGAACTGCTGGAACAAGGCTCAAGTTCCAGCTACTATGAGATGCTAACTTAATCTTGATAGGACTCATCTTAGTGCATATAATAATTCTCTTTTCTATATTTTAGTTGATTGCTAAATTTTCTATTGGATTCATTAGGACTTTCTGAATCCTGCTTGCTACCGTTTTAAATTAGCTTTTAACCTTAGTAATTTGTTCTTTATCAAAGATTCAATGTTTGTGATGGCCAG
CDS Sequence
- >Solyc01g103960.3.1
ATGTCTAAAGATAAGCTTCCAAAAGCCAACTGGACGCAACATGCTATTGCCCATGATAATTTTTCATGCCAAGATAAGTTCTTGAGTTCGAACATCCTTTTCTCTCTACCCACACAAAGACATTGTGCCAGAGATGAAATGAATGCCAGGTCAGTGACTTGTCATATCAGAAGTGTATCAAAATTGGAAGCTGAAAAGGCTTGGAAGCTTCTAACCAGCCTCAAGTTGTCTCCCAAGAGTTACACAAGACCAGGGAAAACTCCACAACTAACCAAAGATACCAATGCTTTCTCACAACACTCTAATCACACACAGTTCCCGCGTGCATCTGATGGAAACTGTGCTCCAGCGAGGTGCAGGCCAGTGCATCAAGGTGTTGGTGACGATGGTGAAAACAGTGACTCGAGAAGGTATGCAGGCAATTGTTTTCCACCACACTCAAGCGGTGTAGCAGAAACAGGGAACGTTGTGAACAGGCAGAGTGGAGTAGACAATTCACATGCTCGAGGTGTAGGGGAAATATCCAGCAGTCATGCAAATGGTGCAAGCAAGAAGACACGGGAGGTGTATACAACTTGTGCTGATGAAACTGAAGAAGATGACATTCTTCTGAATATAGATGTCGACCAAATAGTAGAACACTATCAGACCAACTGCACGCCACAGCCTTCTGTCTCCAGGTTCCCGTCAACTACTCCAGTTACAAAGTCTCAAAGTTTGGCTGGACACGAGGAGACAAATTTGCCACCAGAGTTGTCCATAAACTGCAACCACGGTTTGCAGCTAGGACTTTGCCCTGGAGCCCTGGATCATTTACAAGAGATGAAGGATAAGCTAATTGAGATTTCAAATGATCTTCTTGACAATGTTTCAGACCTGAGTTCAGAACAGATTGAAATGCTTCGCCAAGAGCGGTCACAGCTGAAGCTGCAAATTCAGCACCTCGAAAAATTTCTTCAAACTGTATCAGGCAACGAAGAAAGAAAGATGTCACAGTGTTCCGCTTCCACACTAACTTCTGCCTTTCAGTATGAAACACCTTCTGCCTTTCAGTATGCCACACCTTCTTCATTCCCTTCAAGGATTAATCCTACAAGACTCGACACACAGTTTAGTGGATACAATGAGTCCAGTCACTTTGACAACTGGAATTCATCATCACTTTCATTTGACGTGACTGGTGGAAATGGTCTTTCAACAGCCCCAGTGGAAAGAGAACCATACATCCCAAAGTATCTTGAAGTTAACTATATTGATGGTTCAAATGACAAGAAGTGGAGTTGCCGAGATTTCCCTTGGACAAAGAAGCTTGAGGCCAATAACAAAAAAGTATTTGGAAATCACTCTTTTCGTCCTAATCAACGAGAGGTGATAAATGCAACAATGAGCGGAAATGATGTGTTTGTTTTAATGCCAACAGGAGGAGGCAAAAGTCTGACATATCAGCTTCCTGGTCTTATTTGTCCTGGAATTACTTTGGTCATTTCACCTCTTGTTTCGCTCATCCAAGATCAGATAATGCATTTGCTGCAGGTTAACATACCTGCTGCTTATCTTAGTTCCAACATGGAGTGGACTGAGCAACAGGAGATACTTAGAGAGCTCAATTCAGATGGTTGCAAATACAAATTTTTATATGTTACCCCAGAGAAAGTTGCCAAAAGTGATGTTCTATTGAGACACTTGGAAAGTCTACATACTCGTGATACACTTGCAAGAATTGTTATTGATGAAGCACATTGCGTAAGCCAGTGGGGACATGATTTCAGGCCTGATTATCAGTGTTTAGGTATCCTGAAGCAAAAGTTCCCAACTGTGCCTGTTCTGGCCTTGACTGCTACTGCTACAATAAGTGTCAAGGAGGATGTTGTTCAGGCTCTTGGTCTTGCCAACTGCATTATTTTCCGACAAAGCTTCAATCGCCCAAATTTAAGATATACTGTTATCCCAAAGACAAAGAAGTGTTTGGAAGACATTGGCACTTTTATAAAGAATAATCATTTTGATCAATGCGGGATAATTTATTGTCTTTCTAGAATGGATTGTGAGAGAGTAGCAGAAAAGCTGCAGGAATACGGACATAAAGCAGCATTTTATCATGGCAGCATGGATGGTGCTCAACGAGCTAACATCCAGAAGCAGTGGAGCAAAGATGAGATCAATATTATATGTGCAACTATTGCGTTTGGAATGGGTATCAACAAGCCAAATGTTCGTTTTGTTATTCATCATTCTTTGCCAAAATCTATTGAAGGGTACCATCAGGAGTGTGGTCGTGCTGGTAGAGATGGTCTACCTTCCTCTTGTGTTCTGTACTACAGTTATAGTGATTATATACGAGTCAAGCATATGATCAGTCAAGGCACTGTAGAGCAGAGTCCCTTTGGGTCTGGATATGGTCGTTCAAATGTGGCAGCTTCAGGGAGGAACCTTGAGACGAACGTGGAAAATCTTCTAAGAATGGTTAGTTACTGTGAGAATGAAGTTGATTGTCGTCGTCTCCTTCAGCTTATTCACTTTGGCGAGAAATTCGAATCTACCAACTGCCGAAAAACATGTGATAATTGCTGCAAGACTCAGAACTGTATTGAGAAAGACGTCACTGAAGTTGCAAAGCAATTAGTTGAATTGGTGAAGACGACGGGACAAAAATTCTCGTCAGCCCATGTTTTGGAAGTCTTCAGGGGCTCCTTGAGCCAATATGTGAAGAAACACAGACACGAGTCCTTGCATCTGCATGGAGCTGGAAAGAAGCTAGCCAAGGGTGAAGCATCCCGCGTGCTACGTCATCTTGTTACTGAAGATATTCTTGTGGAGGATGTTAAAAAGAGTGACCTTTATGGATCCGTTTCATCAGTCCTAAAGGTGAATGAATCAAAGGCCTATAATCTATTTGCTGGTGGTCAGACGTTGAGATTAAGGTTCCCTTCATTTGTGAAGGCATCTAAACTGGGTAAATATGAAGCCACTCCAGCAAAAGGTTCACTAACATCAGGAAAGCAGAGTCCTCCAAGGACAGACCCTTCTGGTGTACCTCAATCTACATTTGATCCATCCCTTTCAGCGATACTATATTCAGCTCTACGGAAACTTCGTACTAATATTGTTAGGGAATCTGGAGATGGTGTCATGGCTCACCATATATTTGGAGATGACACCCTGCAGCTGATTGGCCAGAAAGTACCTAGAACTAAAAATGAGCTACTTGACATCAATGGAATTGGCAAGGTAAAAATCAACAAGTACGGGGATAATGTGCTGCAAACCATTGAAGCTACGGTCAGGGATTACTATAAGTCAGATAAGACGAGTAGCAGTGGCAATGACAATACTGATTCAGGTAAAAAGAGGAGAAATTCCATCAATGTACAAAACGGGAACTCCAAAGATGAAGAATTCTTCACTGAAAGCACTGGATGTACTAAGAAAAGGGTGTTAAAGAAGCAGAACAAACATGCTGAGGTTATTGATTATAGGGACCTTGGGTATTTTGATGAATGTATAGACGGTGACCTTGATTTCGATGAGACTATGATGCCTTAG
Protein Sequence
- >Solyc01g103960.3.1
MSKDKLPKANWTQHAIAHDNFSCQDKFLSSNILFSLPTQRHCARDEMNARSVTCHIRSVSKLEAEKAWKLLTSLKLSPKSYTRPGKTPQLTKDTNAFSQHSNHTQFPRASDGNCAPARCRPVHQGVGDDGENSDSRRYAGNCFPPHSSGVAETGNVVNRQSGVDNSHARGVGEISSSHANGASKKTREVYTTCADETEEDDILLNIDVDQIVEHYQTNCTPQPSVSRFPSTTPVTKSQSLAGHEETNLPPELSINCNHGLQLGLCPGALDHLQEMKDKLIEISNDLLDNVSDLSSEQIEMLRQERSQLKLQIQHLEKFLQTVSGNEERKMSQCSASTLTSAFQYETPSAFQYATPSSFPSRINPTRLDTQFSGYNESSHFDNWNSSSLSFDVTGGNGLSTAPVEREPYIPKYLEVNYIDGSNDKKWSCRDFPWTKKLEANNKKVFGNHSFRPNQREVINATMSGNDVFVLMPTGGGKSLTYQLPGLICPGITLVISPLVSLIQDQIMHLLQVNIPAAYLSSNMEWTEQQEILRELNSDGCKYKFLYVTPEKVAKSDVLLRHLESLHTRDTLARIVIDEAHCVSQWGHDFRPDYQCLGILKQKFPTVPVLALTATATISVKEDVVQALGLANCIIFRQSFNRPNLRYTVIPKTKKCLEDIGTFIKNNHFDQCGIIYCLSRMDCERVAEKLQEYGHKAAFYHGSMDGAQRANIQKQWSKDEINIICATIAFGMGINKPNVRFVIHHSLPKSIEGYHQECGRAGRDGLPSSCVLYYSYSDYIRVKHMISQGTVEQSPFGSGYGRSNVAASGRNLETNVENLLRMVSYCENEVDCRRLLQLIHFGEKFESTNCRKTCDNCCKTQNCIEKDVTEVAKQLVELVKTTGQKFSSAHVLEVFRGSLSQYVKKHRHESLHLHGAGKKLAKGEASRVLRHLVTEDILVEDVKKSDLYGSVSSVLKVNESKAYNLFAGGQTLRLRFPSFVKASKLGKYEATPAKGSLTSGKQSPPRTDPSGVPQSTFDPSLSAILYSALRKLRTNIVRESGDGVMAHHIFGDDTLQLIGQKVPRTKNELLDINGIGKVKINKYGDNVLQTIEATVRDYYKSDKTSSSGNDNTDSGKKRRNSINVQNGNSKDEEFFTESTGCTKKRVLKKQNKHAEVIDYRDLGYFDECIDGDLDFDETMMP*