Gene Details:
- Gene ID: Solyc01g103960
- Gene Symbol: RecQ4
- Gene Name: DNA 3’-5’ helicase
- Genome: Tomato Genome version SL4.0
- Species: Solanum lycopersicum
Functional Descriptions:
- CRISPR/Cas inactivation of RecQ4 increases homeologous crossovers in an interspecific tomato hybrid.
- The positive effect of RecQ4 knockout on homeologous crossovers in a crop breeding intermediate.
- RecQ4 knockout results in increased frequency of ring bivalents in male meiocytes.
Function-related keywords:
Literature:
- CRISPR/Cas inactivation of RECQ4 increases homeologous crossovers in an interspecific tomato hybrid. DOI: 10.1111/pbi.13248 ; PMID: 31483929
Related News:
Gene Resources:
- NCBI ID: 101260976
- UniProt accessions: A0A3Q7EQ48
Sequences:
cDNA Sequence
- >Solyc01g103960.3.1
AAACGTGAATAATGCCAGAATCGGGCCAAGCCCTATCTCGCTCGTGAAAACTATCCCGCCAATTCATCCCGCGTCTCGAAATTTGAAGCTTTCGGGCTGTATCCTCATTTCTTCGTTTCTCTTCCATATCGTGGCTGACAGGCCAACACCGTTTCGCCGGGGACTGATTCGCCGACGACGATAAAAGTCATACTTTACGGGAGGCTAATTCAGCTGGAGGTTCCATGTCTAAAGATAAGCTTCCAAAAGCCAACTGGACGCAACATGCTATTGCCCATGATAATTTTTCATGCCAAGATAAGTTCTTGAGTTCGAACATCCTTTTCTCTCTACCCACACAAAGACATTGTGCCAGAGATGAAATGAATGCCAGGTCAGTGACTTGTCATATCAGAAGTGTATCAAAATTGGAAGCTGAAAAGGCTTGGAAGCTTCTAACCAGCCTCAAGTTGTCTCCCAAGAGTTACACAAGACCAGGGAAAACTCCACAACTAACCAAAGATACCAATGCTTTCTCACAACACTCTAATCACACACAGTTCCCGCGTGCATCTGATGGAAACTGTGCTCCAGCGAGGTGCAGGCCAGTGCATCAAGGTGTTGGTGACGATGGTGAAAACAGTGACTCGAGAAGGTATGCAGGCAATTGTTTTCCACCACACTCAAGCGGTGTAGCAGAAACAGGGAACGTTGTGAACAGGCAGAGTGGAGTAGACAATTCACATGCTCGAGGTGTAGGGGAAATATCCAGCAGTCATGCAAATGGTGCAAGCAAGAAGACACGGGAGGTGTATACAACTTGTGCTGATGAAACTGAAGAAGATGACATTCTTCTGAATATAGATGTCGACCAAATAGTAGAACACTATCAGACCAACTGCACGCCACAGCCTTCTGTCTCCAGGTTCCCGTCAACTACTCCAGTTACAAAGTCTCAAAGTTTGGCTGGACACGAGGAGACAAATTTGCCACCAGAGTTGTCCATAAACTGCAACCACGGTTTGCAGCTAGGACTTTGCCCTGGAGCCCTGGATCATTTACAAGAGATGAAGGATAAGCTAATTGAGATTTCAAATGATCTTCTTGACAATGTTTCAGACCTGAGTTCAGAACAGATTGAAATGCTTCGCCAAGAGCGGTCACAGCTGAAGCTGCAAATTCAGCACCTCGAAAAATTTCTTCAAACTGTATCAGGCAACGAAGAAAGAAAGATGTCACAGTGTTCCGCTTCCACACTAACTTCTGCCTTTCAGTATGAAACACCTTCTGCCTTTCAGTATGCCACACCTTCTTCATTCCCTTCAAGGATTAATCCTACAAGACTCGACACACAGTTTAGTGGATACAATGAGTCCAGTCACTTTGACAACTGGAATTCATCATCACTTTCATTTGACGTGACTGGTGGAAATGGTCTTTCAACAGCCCCAGTGGAAAGAGAACCATACATCCCAAAGTATCTTGAAGTTAACTATATTGATGGTTCAAATGACAAGAAGTGGAGTTGCCGAGATTTCCCTTGGACAAAGAAGCTTGAGGCCAATAACAAAAAAGTATTTGGAAATCACTCTTTTCGTCCTAATCAACGAGAGGTGATAAATGCAACAATGAGCGGAAATGATGTGTTTGTTTTAATGCCAACAGGAGGAGGCAAAAGTCTGACATATCAGCTTCCTGGTCTTATTTGTCCTGGAATTACTTTGGTCATTTCACCTCTTGTTTCGCTCATCCAAGATCAGATAATGCATTTGCTGCAGGTTAACATACCTGCTGCTTATCTTAGTTCCAACATGGAGTGGACTGAGCAACAGGAGATACTTAGAGAGCTCAATTCAGATGGTTGCAAATACAAATTTTTATATGTTACCCCAGAGAAAGTTGCCAAAAGTGATGTTCTATTGAGACACTTGGAAAGTCTACATACTCGTGATACACTTGCAAGAATTGTTATTGATGAAGCACATTGCGTAAGCCAGTGGGGACATGATTTCAGGCCTGATTATCAGTGTTTAGGTATCCTGAAGCAAAAGTTCCCAACTGTGCCTGTTCTGGCCTTGACTGCTACTGCTACAATAAGTGTCAAGGAGGATGTTGTTCAGGCTCTTGGTCTTGCCAACTGCATTATTTTCCGACAAAGCTTCAATCGCCCAAATTTAAGATATACTGTTATCCCAAAGACAAAGAAGTGTTTGGAAGACATTGGCACTTTTATAAAGAATAATCATTTTGATCAATGCGGGATAATTTATTGTCTTTCTAGAATGGATTGTGAGAGAGTAGCAGAAAAGCTGCAGGAATACGGACATAAAGCAGCATTTTATCATGGCAGCATGGATGGTGCTCAACGAGCTAACATCCAGAAGCAGTGGAGCAAAGATGAGATCAATATTATATGTGCAACTATTGCGTTTGGAATGGGTATCAACAAGCCAAATGTTCGTTTTGTTATTCATCATTCTTTGCCAAAATCTATTGAAGGGTACCATCAGGAGTGTGGTCGTGCTGGTAGAGATGGTCTACCTTCCTCTTGTGTTCTGTACTACAGTTATAGTGATTATATACGAGTCAAGCATATGATCAGTCAAGGCACTGTAGAGCAGAGTCCCTTTGGGTCTGGATATGGTCGTTCAAATGTGGCAGCTTCAGGGAGGAACCTTGAGACGAACGTGGAAAATCTTCTAAGAATGGTTAGTTACTGTGAGAATGAAGTTGATTGTCGTCGTCTCCTTCAGCTTATTCACTTTGGCGAGAAATTCGAATCTACCAACTGCCGAAAAACATGTGATAATTGCTGCAAGACTCAGAACTGTATTGAGAAAGACGTCACTGAAGTTGCAAAGCAATTAGTTGAATTGGTGAAGACGACGGGACAAAAATTCTCGTCAGCCCATGTTTTGGAAGTCTTCAGGGGCTCCTTGAGCCAATATGTGAAGAAACACAGACACGAGTCCTTGCATCTGCATGGAGCTGGAAAGAAGCTAGCCAAGGGTGAAGCATCCCGCGTGCTACGTCATCTTGTTACTGAAGATATTCTTGTGGAGGATGTTAAAAAGAGTGACCTTTATGGATCCGTTTCATCAGTCCTAAAGGTGAATGAATCAAAGGCCTATAATCTATTTGCTGGTGGTCAGACGTTGAGATTAAGGTTCCCTTCATTTGTGAAGGCATCTAAACTGGGTAAATATGAAGCCACTCCAGCAAAAGGTTCACTAACATCAGGAAAGCAGAGTCCTCCAAGGACAGACCCTTCTGGTGTACCTCAATCTACATTTGATCCATCCCTTTCAGCGATACTATATTCAGCTCTACGGAAACTTCGTACTAATATTGTTAGGGAATCTGGAGATGGTGTCATGGCTCACCATATATTTGGAGATGACACCCTGCAGCTGATTGGCCAGAAAGTACCTAGAACTAAAAATGAGCTACTTGACATCAATGGAATTGGCAAGGTAAAAATCAACAAGTACGGGGATAATGTGCTGCAAACCATTGAAGCTACGGTCAGGGATTACTATAAGTCAGATAAGACGAGTAGCAGTGGCAATGACAATACTGATTCAGGTAAAAAGAGGAGAAATTCCATCAATGTACAAAACGGGAACTCCAAAGATGAAGAATTCTTCACTGAAAGCACTGGATGTACTAAGAAAAGGGTGTTAAAGAAGCAGAACAAACATGCTGAGGTTATTGATTATAGGGACCTTGGGTATTTTGATGAATGTATAGACGGTGACCTTGATTTCGATGAGACTATGATGCCTTAGTGAATGCTTCCTATTTCAAAAGTTGATCAGAATGAAAGAAGCTTTTTATGATCAACATCCCAGGTTGTATGGTTCGAAGTTAGCATCGCAGTTTGCATGGGTGAAAAGTTTATGATCATCACACTGTTCTTATTAATTTGGGTGAAATGTAAATCTGTTAACAGAACTGCTGGAACAAGGCTCAAGTTCCAGCTACTATGAGATGCTAACTTAATCTTGATAGGACTCATCTTAGTGCATATAATAATTCTCTTTTCTATATTTTAGTTGATTGCTAAATTTTCTATTGGATTCATTAGGACTTTCTGAATCCTGCTTGCTACCGTTTTAAATTAGCTTTTAACCTTAGTAATTTGTTCTTTATCAAAGATTCAATGTTTGTGATGGCCAG
CDS Sequence
- >Solyc01g103960.3.1
ATGTCTAAAGATAAGCTTCCAAAAGCCAACTGGACGCAACATGCTATTGCCCATGATAATTTTTCATGCCAAGATAAGTTCTTGAGTTCGAACATCCTTTTCTCTCTACCCACACAAAGACATTGTGCCAGAGATGAAATGAATGCCAGGTCAGTGACTTGTCATATCAGAAGTGTATCAAAATTGGAAGCTGAAAAGGCTTGGAAGCTTCTAACCAGCCTCAAGTTGTCTCCCAAGAGTTACACAAGACCAGGGAAAACTCCACAACTAACCAAAGATACCAATGCTTTCTCACAACACTCTAATCACACACAGTTCCCGCGTGCATCTGATGGAAACTGTGCTCCAGCGAGGTGCAGGCCAGTGCATCAAGGTGTTGGTGACGATGGTGAAAACAGTGACTCGAGAAGGTATGCAGGCAATTGTTTTCCACCACACTCAAGCGGTGTAGCAGAAACAGGGAACGTTGTGAACAGGCAGAGTGGAGTAGACAATTCACATGCTCGAGGTGTAGGGGAAATATCCAGCAGTCATGCAAATGGTGCAAGCAAGAAGACACGGGAGGTGTATACAACTTGTGCTGATGAAACTGAAGAAGATGACATTCTTCTGAATATAGATGTCGACCAAATAGTAGAACACTATCAGACCAACTGCACGCCACAGCCTTCTGTCTCCAGGTTCCCGTCAACTACTCCAGTTACAAAGTCTCAAAGTTTGGCTGGACACGAGGAGACAAATTTGCCACCAGAGTTGTCCATAAACTGCAACCACGGTTTGCAGCTAGGACTTTGCCCTGGAGCCCTGGATCATTTACAAGAGATGAAGGATAAGCTAATTGAGATTTCAAATGATCTTCTTGACAATGTTTCAGACCTGAGTTCAGAACAGATTGAAATGCTTCGCCAAGAGCGGTCACAGCTGAAGCTGCAAATTCAGCACCTCGAAAAATTTCTTCAAACTGTATCAGGCAACGAAGAAAGAAAGATGTCACAGTGTTCCGCTTCCACACTAACTTCTGCCTTTCAGTATGAAACACCTTCTGCCTTTCAGTATGCCACACCTTCTTCATTCCCTTCAAGGATTAATCCTACAAGACTCGACACACAGTTTAGTGGATACAATGAGTCCAGTCACTTTGACAACTGGAATTCATCATCACTTTCATTTGACGTGACTGGTGGAAATGGTCTTTCAACAGCCCCAGTGGAAAGAGAACCATACATCCCAAAGTATCTTGAAGTTAACTATATTGATGGTTCAAATGACAAGAAGTGGAGTTGCCGAGATTTCCCTTGGACAAAGAAGCTTGAGGCCAATAACAAAAAAGTATTTGGAAATCACTCTTTTCGTCCTAATCAACGAGAGGTGATAAATGCAACAATGAGCGGAAATGATGTGTTTGTTTTAATGCCAACAGGAGGAGGCAAAAGTCTGACATATCAGCTTCCTGGTCTTATTTGTCCTGGAATTACTTTGGTCATTTCACCTCTTGTTTCGCTCATCCAAGATCAGATAATGCATTTGCTGCAGGTTAACATACCTGCTGCTTATCTTAGTTCCAACATGGAGTGGACTGAGCAACAGGAGATACTTAGAGAGCTCAATTCAGATGGTTGCAAATACAAATTTTTATATGTTACCCCAGAGAAAGTTGCCAAAAGTGATGTTCTATTGAGACACTTGGAAAGTCTACATACTCGTGATACACTTGCAAGAATTGTTATTGATGAAGCACATTGCGTAAGCCAGTGGGGACATGATTTCAGGCCTGATTATCAGTGTTTAGGTATCCTGAAGCAAAAGTTCCCAACTGTGCCTGTTCTGGCCTTGACTGCTACTGCTACAATAAGTGTCAAGGAGGATGTTGTTCAGGCTCTTGGTCTTGCCAACTGCATTATTTTCCGACAAAGCTTCAATCGCCCAAATTTAAGATATACTGTTATCCCAAAGACAAAGAAGTGTTTGGAAGACATTGGCACTTTTATAAAGAATAATCATTTTGATCAATGCGGGATAATTTATTGTCTTTCTAGAATGGATTGTGAGAGAGTAGCAGAAAAGCTGCAGGAATACGGACATAAAGCAGCATTTTATCATGGCAGCATGGATGGTGCTCAACGAGCTAACATCCAGAAGCAGTGGAGCAAAGATGAGATCAATATTATATGTGCAACTATTGCGTTTGGAATGGGTATCAACAAGCCAAATGTTCGTTTTGTTATTCATCATTCTTTGCCAAAATCTATTGAAGGGTACCATCAGGAGTGTGGTCGTGCTGGTAGAGATGGTCTACCTTCCTCTTGTGTTCTGTACTACAGTTATAGTGATTATATACGAGTCAAGCATATGATCAGTCAAGGCACTGTAGAGCAGAGTCCCTTTGGGTCTGGATATGGTCGTTCAAATGTGGCAGCTTCAGGGAGGAACCTTGAGACGAACGTGGAAAATCTTCTAAGAATGGTTAGTTACTGTGAGAATGAAGTTGATTGTCGTCGTCTCCTTCAGCTTATTCACTTTGGCGAGAAATTCGAATCTACCAACTGCCGAAAAACATGTGATAATTGCTGCAAGACTCAGAACTGTATTGAGAAAGACGTCACTGAAGTTGCAAAGCAATTAGTTGAATTGGTGAAGACGACGGGACAAAAATTCTCGTCAGCCCATGTTTTGGAAGTCTTCAGGGGCTCCTTGAGCCAATATGTGAAGAAACACAGACACGAGTCCTTGCATCTGCATGGAGCTGGAAAGAAGCTAGCCAAGGGTGAAGCATCCCGCGTGCTACGTCATCTTGTTACTGAAGATATTCTTGTGGAGGATGTTAAAAAGAGTGACCTTTATGGATCCGTTTCATCAGTCCTAAAGGTGAATGAATCAAAGGCCTATAATCTATTTGCTGGTGGTCAGACGTTGAGATTAAGGTTCCCTTCATTTGTGAAGGCATCTAAACTGGGTAAATATGAAGCCACTCCAGCAAAAGGTTCACTAACATCAGGAAAGCAGAGTCCTCCAAGGACAGACCCTTCTGGTGTACCTCAATCTACATTTGATCCATCCCTTTCAGCGATACTATATTCAGCTCTACGGAAACTTCGTACTAATATTGTTAGGGAATCTGGAGATGGTGTCATGGCTCACCATATATTTGGAGATGACACCCTGCAGCTGATTGGCCAGAAAGTACCTAGAACTAAAAATGAGCTACTTGACATCAATGGAATTGGCAAGGTAAAAATCAACAAGTACGGGGATAATGTGCTGCAAACCATTGAAGCTACGGTCAGGGATTACTATAAGTCAGATAAGACGAGTAGCAGTGGCAATGACAATACTGATTCAGGTAAAAAGAGGAGAAATTCCATCAATGTACAAAACGGGAACTCCAAAGATGAAGAATTCTTCACTGAAAGCACTGGATGTACTAAGAAAAGGGTGTTAAAGAAGCAGAACAAACATGCTGAGGTTATTGATTATAGGGACCTTGGGTATTTTGATGAATGTATAGACGGTGACCTTGATTTCGATGAGACTATGATGCCTTAG
Protein Sequence
- >Solyc01g103960.3.1
MSKDKLPKANWTQHAIAHDNFSCQDKFLSSNILFSLPTQRHCARDEMNARSVTCHIRSVSKLEAEKAWKLLTSLKLSPKSYTRPGKTPQLTKDTNAFSQHSNHTQFPRASDGNCAPARCRPVHQGVGDDGENSDSRRYAGNCFPPHSSGVAETGNVVNRQSGVDNSHARGVGEISSSHANGASKKTREVYTTCADETEEDDILLNIDVDQIVEHYQTNCTPQPSVSRFPSTTPVTKSQSLAGHEETNLPPELSINCNHGLQLGLCPGALDHLQEMKDKLIEISNDLLDNVSDLSSEQIEMLRQERSQLKLQIQHLEKFLQTVSGNEERKMSQCSASTLTSAFQYETPSAFQYATPSSFPSRINPTRLDTQFSGYNESSHFDNWNSSSLSFDVTGGNGLSTAPVEREPYIPKYLEVNYIDGSNDKKWSCRDFPWTKKLEANNKKVFGNHSFRPNQREVINATMSGNDVFVLMPTGGGKSLTYQLPGLICPGITLVISPLVSLIQDQIMHLLQVNIPAAYLSSNMEWTEQQEILRELNSDGCKYKFLYVTPEKVAKSDVLLRHLESLHTRDTLARIVIDEAHCVSQWGHDFRPDYQCLGILKQKFPTVPVLALTATATISVKEDVVQALGLANCIIFRQSFNRPNLRYTVIPKTKKCLEDIGTFIKNNHFDQCGIIYCLSRMDCERVAEKLQEYGHKAAFYHGSMDGAQRANIQKQWSKDEINIICATIAFGMGINKPNVRFVIHHSLPKSIEGYHQECGRAGRDGLPSSCVLYYSYSDYIRVKHMISQGTVEQSPFGSGYGRSNVAASGRNLETNVENLLRMVSYCENEVDCRRLLQLIHFGEKFESTNCRKTCDNCCKTQNCIEKDVTEVAKQLVELVKTTGQKFSSAHVLEVFRGSLSQYVKKHRHESLHLHGAGKKLAKGEASRVLRHLVTEDILVEDVKKSDLYGSVSSVLKVNESKAYNLFAGGQTLRLRFPSFVKASKLGKYEATPAKGSLTSGKQSPPRTDPSGVPQSTFDPSLSAILYSALRKLRTNIVRESGDGVMAHHIFGDDTLQLIGQKVPRTKNELLDINGIGKVKINKYGDNVLQTIEATVRDYYKSDKTSSSGNDNTDSGKKRRNSINVQNGNSKDEEFFTESTGCTKKRVLKKQNKHAEVIDYRDLGYFDECIDGDLDFDETMMP*