Information report for ICE1
Gene Details
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Functional Descriptions
- By integrating RNA-sequencing (RNA-seq) and chromatin immunoprecipitation-sequencing (ChIP-seq) assays, we revealed that ICE1 directly altered the expression of 76 downstream cold-responsive (COR) genes that potentially confer cold tolerance to tomato plants.
- The physical interaction of CaM6 with ICE1 attenuated ICE1 transcriptional activity during cold stress.
- These findings reveal that CaM6 attenuates the cold tolerance of tomato plants by suppressing ICE1-dependent COR gene expression.
- We propose a CaM6/ICE1 module in which ICE1 is epistatic to CaM6 under cold stress. Our study sheds light on the mechanism of plant response to cold stress and reveals CaM6 is involved in the regulation of ICE1.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 101266110
- UniProt accessions: A0A3Q7FTT9
- AlphaFoldDB: A0A3Q7FTT9
- EnsemblPlants: Solyc03g118310.3.1
- Gramene: Solyc03g118310.3.1
- GO: GO:0003700 , GO:0005634 , GO:0006355 , GO:0043565 , GO:0046983
- OMA: NENHQQN
- InterPro: IPR011598 , IPR036638 , IPR051358 , IPR054502
- PANTHER: PTHR31945 , PTHR31945:SF129
- SUPFAM: SSF47459
- PROSITE: PS50888
- Gene3D: 4.10.280.10
- Pfam: PF00010 , PF22754
- CDD: cd04873 , cd11443
- STRING: 4081.A0A3Q7FTT9
Sequences
cDNA Sequence
- >Solyc03g118310.4.1
AATATTGCTATAAATTGAGGCTTAATTGTGTATTTGCAGAAGCAGAAAGTTTAGTAGTAATAATAGTGATAGCAGAGTTGAGTTTTCTCTCTCTGTGTTAAGTTGTCTTCTCTCTCATATAAAGGGAAAAAAAAGAAAAAATGATAACTGGAGTGAATGATATGGGTTGGATTGATGGTAAGGAGGATGGAGGAACTGGTTCTTGGGTTAATCAGAACAATGAAAATCATCAACAGAACAATGGTGGTTTTCCCAATGAAAATCATCAGCTGAACAATGGTGGTTTTACTAATTTCCAAGGTATGGTTGATGATGGAGGTGTGGATTGGTTTATGGGTGGTGGTGATAGTAACAATCATCACATCAACAACAACAACAACAATGGTGGTGGTGGTGGTGGTGGTAGCAACATGCAGAGCCACATTTCTTACTCTACAAGTTTCACTGAAGCTGAAAACAGTTTGCTTCTGCAACCTGTTGATTCTTCAGCTTCCTGCTCGCCTGTTTCTGGTAACGTTTTCAACAACATTGACCCTTCTCAGGTGAACTTCTTCATGCCCCAAAAATCTACTATTCCTTCTTCACTCACTGGGTTATCCAACAACCCAATGGATAACAGCTTCAATTTGGGTATGTTGAATCAAGCTGGGAACGGGATGATGAATACTGGGTATCATCATCTGGGTTCACCAAACCAAATGGGGACGAACAACCTGAGTTCTTATACTCAGTTTTCTTCTCCCAATCTGCTCCAGCTACCTCAGGTAGCTGGTGGGTACAGTTCGATGGGATTTGGGGCTAACAATTCTGCTAATGGGAACACTTTGTTTCTCAATCGGTCTAGAACTCATAAACCTTTAGACAATTTTGCTTCCATTGGAGCACAGCCAACTCTTTTCCAGAAAAGGATTGCAAAGAACTTGGTTAGTAATGGTGAAAATTTAGGTACAGAAATCGGTCAATCTTCCAGTAATCTGACTGATAAAAAAAGGAAGTCCAGCATGAATGATGAGTTTGAAGATGTTAGCATGGATGGAACATTGAATTACGACTCGGATGAGTTCATGGATATCTCTAACAAAATGGAAGATGGGATCAAGATTGGGGACAGCTCTAATGCAGCCAGCACTGTCAGTGGCGCTGATCAAAAGGGAAAAAAGAAGGGACCTCCAGCTAAGAACCTGATGGCGGAGCGACGCCGCAGAAAGAAGCTGAATGACAGGCTTTACATGCTGCGATCGGTTGTCCCAAAGATAACCAAGATGGACAGGGCTTCAATCTTAGGAGATGCAATTAAGTACTTGAAGGAGCTTCTGCATGACATCAATGAGCTGCATAATGAGTTGGAGTCCACACCAGCTAACAACTCTTCATTGAGTCCCGCAACCAGCTTCCATCCTCTGACACCGACTGCATCAGCTCTGCCAAGTCGTATAAAGGAGGAACTTGTTCCAAGCCCCCTGTCCAGCCCTACTGGACAACCTGCTAGGATTGAAGTGAGGGTCAGGGAAGGAAAAGCGGTGAACATTCATATGATCTGCAGCCGCAAACCAGGGGTTTTACTCTCAACAATGAAGGCTCTGGACAGTCTTGGACTGGACATTCAACAAGCTGTTATCAGCTGCTTCAATGGGTTTGTGTTGGATGTGTTCCGAGCTGAGCAATCGAACGAAGGTCAAGAGATGCATCCAGATCAGATCAAAGCTGTGTTGATGGAGACTGCTGGCTTTCAAGGGGGGACGATATAAGCTGCTCGATCTAGTATACGAAGGAGAGGCTCTATCGAAGATTTTGGACCTCAGGGTGCTATAGCTTTTAGACCTCAAGACTTTATTAGTTTACTTGTGTTTTCATGTTATTAGATGGTTACAGACCATGGTGGTCCGAACCGGGTTTTGTCCTTTTTCTTTTTTAGTCAGTTATATTGGTGTTTTCTTTAGGAGAAACATTGAGCTTATGAAGCTCCAAAACTGAATGCTATGAAATTCC
CDS Sequence
- >Solyc03g118310.4.1
ATGATAACTGGAGTGAATGATATGGGTTGGATTGATGGTAAGGAGGATGGAGGAACTGGTTCTTGGGTTAATCAGAACAATGAAAATCATCAACAGAACAATGGTGGTTTTCCCAATGAAAATCATCAGCTGAACAATGGTGGTTTTACTAATTTCCAAGGTATGGTTGATGATGGAGGTGTGGATTGGTTTATGGGTGGTGGTGATAGTAACAATCATCACATCAACAACAACAACAACAATGGTGGTGGTGGTGGTGGTGGTAGCAACATGCAGAGCCACATTTCTTACTCTACAAGTTTCACTGAAGCTGAAAACAGTTTGCTTCTGCAACCTGTTGATTCTTCAGCTTCCTGCTCGCCTGTTTCTGGTAACGTTTTCAACAACATTGACCCTTCTCAGGTGAACTTCTTCATGCCCCAAAAATCTACTATTCCTTCTTCACTCACTGGGTTATCCAACAACCCAATGGATAACAGCTTCAATTTGGGTATGTTGAATCAAGCTGGGAACGGGATGATGAATACTGGGTATCATCATCTGGGTTCACCAAACCAAATGGGGACGAACAACCTGAGTTCTTATACTCAGTTTTCTTCTCCCAATCTGCTCCAGCTACCTCAGGTAGCTGGTGGGTACAGTTCGATGGGATTTGGGGCTAACAATTCTGCTAATGGGAACACTTTGTTTCTCAATCGGTCTAGAACTCATAAACCTTTAGACAATTTTGCTTCCATTGGAGCACAGCCAACTCTTTTCCAGAAAAGGATTGCAAAGAACTTGGTTAGTAATGGTGAAAATTTAGGTACAGAAATCGGTCAATCTTCCAGTAATCTGACTGATAAAAAAAGGAAGTCCAGCATGAATGATGAGTTTGAAGATGTTAGCATGGATGGAACATTGAATTACGACTCGGATGAGTTCATGGATATCTCTAACAAAATGGAAGATGGGATCAAGATTGGGGACAGCTCTAATGCAGCCAGCACTGTCAGTGGCGCTGATCAAAAGGGAAAAAAGAAGGGACCTCCAGCTAAGAACCTGATGGCGGAGCGACGCCGCAGAAAGAAGCTGAATGACAGGCTTTACATGCTGCGATCGGTTGTCCCAAAGATAACCAAGATGGACAGGGCTTCAATCTTAGGAGATGCAATTAAGTACTTGAAGGAGCTTCTGCATGACATCAATGAGCTGCATAATGAGTTGGAGTCCACACCAGCTAACAACTCTTCATTGAGTCCCGCAACCAGCTTCCATCCTCTGACACCGACTGCATCAGCTCTGCCAAGTCGTATAAAGGAGGAACTTGTTCCAAGCCCCCTGTCCAGCCCTACTGGACAACCTGCTAGGATTGAAGTGAGGGTCAGGGAAGGAAAAGCGGTGAACATTCATATGATCTGCAGCCGCAAACCAGGGGTTTTACTCTCAACAATGAAGGCTCTGGACAGTCTTGGACTGGACATTCAACAAGCTGTTATCAGCTGCTTCAATGGGTTTGTGTTGGATGTGTTCCGAGCTGAGCAATCGAACGAAGGTCAAGAGATGCATCCAGATCAGATCAAAGCTGTGTTGATGGAGACTGCTGGCTTTCAAGGGGGGACGATATAA
Protein Sequence
- >Solyc03g118310.4.1
MITGVNDMGWIDGKEDGGTGSWVNQNNENHQQNNGGFPNENHQLNNGGFTNFQGMVDDGGVDWFMGGGDSNNHHINNNNNNGGGGGGGSNMQSHISYSTSFTEAENSLLLQPVDSSASCSPVSGNVFNNIDPSQVNFFMPQKSTIPSSLTGLSNNPMDNSFNLGMLNQAGNGMMNTGYHHLGSPNQMGTNNLSSYTQFSSPNLLQLPQVAGGYSSMGFGANNSANGNTLFLNRSRTHKPLDNFASIGAQPTLFQKRIAKNLVSNGENLGTEIGQSSSNLTDKKRKSSMNDEFEDVSMDGTLNYDSDEFMDISNKMEDGIKIGDSSNAASTVSGADQKGKKKGPPAKNLMAERRRRKKLNDRLYMLRSVVPKITKMDRASILGDAIKYLKELLHDINELHNELESTPANNSSLSPATSFHPLTPTASALPSRIKEELVPSPLSSPTGQPARIEVRVREGKAVNIHMICSRKPGVLLSTMKALDSLGLDIQQAVISCFNGFVLDVFRAEQSNEGQEMHPDQIKAVLMETAGFQGGTI*