Information report for CHS1
Gene Details
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Functional Descriptions
- The development of colourless peels in YB-CR-R fruit is mainly caused by the downregulation of genes associated with flavonoid biosynthesis, especially CHS1 and CHS2, rather than by the downregulation of MYB12.
- Our data suggest that these complexes are involved in the transcriptional regulation and H3K27me3 marking of the CHS1 locus.
- Suppressing the expression of particular NF-YB genes increased the levels of H3K27me3 at the CHS1 locus and significantly suppressed the expression of CHS1 during tomato fruit ripening, which led to the development of pink-coloured fruit with colourless peels.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 778294
- UniProt accessions: A0A3Q7J3Y1
- EMBL: MT068495
- EnsemblPlants: Solyc09g091510.3.1
- Gramene: Solyc09g091510.3.1
- KEGG: sly:778294
- GO: GO:0009813 , GO:0016210 , GO:0016747 , GO:0030639
- OMA: FCEYMAS
- InterPro: IPR001099 , IPR011141 , IPR012328 , IPR016039 , IPR018088
- PANTHER: PTHR11877 , PTHR11877:SF80
- SUPFAM: SSF53901
- PROSITE: PS00441
- Gene3D: 3.40.47.10
- OrthoDB: A0A3Q7J3Y1
- Pfam: PF00195 , PF02797
- SMR: A0A3Q7J3Y1
- CDD: cd00831
- STRING: 4081.A0A3Q7J3Y1
Sequences
cDNA Sequence
- >Solyc09g091510.3.1
ACCCCCATGCAACAAAAATACACCAAGACAATTATCACTCTTTCATTCACGTAGTCCTAAACACAAAAAAACCTAGCATATCCACCATTTTTTCCGGCGAAAATGGTCACCGTGGAGGAGTATCGTAAGGCGCAACGTGCAGAGGGTCCAGCTACGATCTTAGCCATTGGAACATCTACGCCTTCTAACTGTGTTGATCAGAGTACTTATCCTGATTATTATTTTCGTATCACTAACAGTGAGCACAAGACTGAGCTCAAAGAGAAATTTAAGCGCATGTGTGATAAATCAATGATTAAGAAGAGATATATGCACTTAACCGAAGAAATCTTGAAAGAGAACCCTAACATGTGTGCATACATGGCACCTTCCCTTGATGCAAGGCAAGACATAGTTGTTGTTGAAGTGCCTAAACTTGGAAAAGAGGCAGCCCAAAAGGCCATCAAAGAATGGGGCCAGCCCAAATCCAAGATTACCCATTTGGTCTTTTGTACCACTAGTGGTGTGGACATGCCCGGGTGTGACTACCAACTCGCTAAGCTCCTAGGGCTTCGCCCATCAGTCAAGCGACTCATGATGTACCAACAAGGTTGCTTTGCCGGGGGAACAGTACTTCGGCTAGCCAAGGACTTGGCTGAGAACAACAAGGGTGCTAGAGTCCTTGTTGTTTGCTCTGAGATCACTGCAGTTACGTTCCGTGGACCCAGTGAATCTCACTTAGATAGCTTGGTAGGCCAAGCCCTTTTTGGTGATGGGGCGGCCGCAATTATTATAGGTTCGGACCCAATTATAGGGGTCGAAAGACCTTTATTTGAACTCGTCTCAGCAGCCCAAACTCTTGTCCCCGATAGCGAAGGCGCTATTGACGGACACCTACGTGAGGTTGGGCTTACATTCCACTTACTCAAGGATGTTCCTGGGCTTATCTCGAAAAACATCGAAAAGAGCCTTCTAGAAGCATTTCAACCTCTAGGTATATCTGACTGGAACTCTCTATTTTGGATCGCTCACCCTGGCGGGCCTGCGATTTTGGACCAAGTTGAATTGAAGTTGGGCCTAAAGCCTGAGAAACTTAGGGCTACAAGAGAAGTACTAAGTAACTATGGCAATATGTCAAGTGCTTGTGTGTTGTTTATTTTGGATGAAATGAGAAAGGCCTCTACAAAAGAAGGCCTAGGAACTACTGGTGAAGGGCTTGAATGGGGTGTCCTTTTTGGATTTGGGCCTGGGCTTACAGTTGAGACTGTTGTCCTTCACAGTGTTGCTGCTTAGTGGGCTGGGCTTACATTGTGGGCCTCTAAAATTTCTTGGTTATTAATGTGTTTGCTATATTTTGTTGTTTAATGTTTATGTTGTCTTTTTTCAAATAAAGATATTTATAATGAGAACTATACCTAAATCTCTGTCTAAGTTTAATTTTTTAATATAATTTGCATAATTATTGCTTTAG
CDS Sequence
- >Solyc09g091510.3.1
ATGGTCACCGTGGAGGAGTATCGTAAGGCGCAACGTGCAGAGGGTCCAGCTACGATCTTAGCCATTGGAACATCTACGCCTTCTAACTGTGTTGATCAGAGTACTTATCCTGATTATTATTTTCGTATCACTAACAGTGAGCACAAGACTGAGCTCAAAGAGAAATTTAAGCGCATGTGTGATAAATCAATGATTAAGAAGAGATATATGCACTTAACCGAAGAAATCTTGAAAGAGAACCCTAACATGTGTGCATACATGGCACCTTCCCTTGATGCAAGGCAAGACATAGTTGTTGTTGAAGTGCCTAAACTTGGAAAAGAGGCAGCCCAAAAGGCCATCAAAGAATGGGGCCAGCCCAAATCCAAGATTACCCATTTGGTCTTTTGTACCACTAGTGGTGTGGACATGCCCGGGTGTGACTACCAACTCGCTAAGCTCCTAGGGCTTCGCCCATCAGTCAAGCGACTCATGATGTACCAACAAGGTTGCTTTGCCGGGGGAACAGTACTTCGGCTAGCCAAGGACTTGGCTGAGAACAACAAGGGTGCTAGAGTCCTTGTTGTTTGCTCTGAGATCACTGCAGTTACGTTCCGTGGACCCAGTGAATCTCACTTAGATAGCTTGGTAGGCCAAGCCCTTTTTGGTGATGGGGCGGCCGCAATTATTATAGGTTCGGACCCAATTATAGGGGTCGAAAGACCTTTATTTGAACTCGTCTCAGCAGCCCAAACTCTTGTCCCCGATAGCGAAGGCGCTATTGACGGACACCTACGTGAGGTTGGGCTTACATTCCACTTACTCAAGGATGTTCCTGGGCTTATCTCGAAAAACATCGAAAAGAGCCTTCTAGAAGCATTTCAACCTCTAGGTATATCTGACTGGAACTCTCTATTTTGGATCGCTCACCCTGGCGGGCCTGCGATTTTGGACCAAGTTGAATTGAAGTTGGGCCTAAAGCCTGAGAAACTTAGGGCTACAAGAGAAGTACTAAGTAACTATGGCAATATGTCAAGTGCTTGTGTGTTGTTTATTTTGGATGAAATGAGAAAGGCCTCTACAAAAGAAGGCCTAGGAACTACTGGTGAAGGGCTTGAATGGGGTGTCCTTTTTGGATTTGGGCCTGGGCTTACAGTTGAGACTGTTGTCCTTCACAGTGTTGCTGCTTAG
Protein Sequence
- >Solyc09g091510.3.1
MVTVEEYRKAQRAEGPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGCDYQLAKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIIGSDPIIGVERPLFELVSAAQTLVPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLLEAFQPLGISDWNSLFWIAHPGGPAILDQVELKLGLKPEKLRATREVLSNYGNMSSACVLFILDEMRKASTKEGLGTTGEGLEWGVLFGFGPGLTVETVVLHSVAA*