Information report for Sw-5
Gene Details
Domain Class Descriptions
- Contains a central nucleotide-binding (NB) subdomain as part of a larger entity called the NB-ARC domain. C-terminal to the NB-ARC domain lies a leucine-rich repeat (LRR) domain, which is sometimes followed by an extension of variable length. Hence, this group of R proteins is collectively referred to as NB-LRR proteins. If N-terminal region contain a predicted coiled-coil structures (CC), non-TIR NB-LRR proteins are collectively referred to as CC-NB-LRR or CNL.
Domain Features
- Domain Class: CNL
- Domain types: NBS TM
Gene Resources
- GenBank: 15418708
- GenBank Locus: AY007366
- UniProt: Q941Q9
- EMBL: AY007366
- AlphaFoldDB: Q941Q9
- InterPro: IPR002182 , IPR027417 , IPR032675 , IPR036388 , IPR038005 , IPR042197 , IPR044974 , IPR055414
- PANTHER: PTHR23155 , PTHR23155:SF1228
- SUPFAM: SSF52058 , SSF52540
- Gene3D: 1.10.10.10 , 1.10.8.430 , 1.20.5.4130 , 3.40.50.300 , 3.80.10.10
- CDD: cd14798
Homologs
- Capsicum annuum: T459_32350, T459_20495, T459_32354, T459_07577, T459_07288, T459_32341, T459_07287, T459_32340, T459_32360, T459_07668, T459_32347, T459_32362, T459_32334, T459_32361, T459_32335
- Nicotiana attenuata: A4A49_40279, A4A49_21685, A4A49_35655, A4A49_35656, A4A49_10926, A4A49_27099, A4A49_33251
- Nicotiana tabacum: XP_016498898.1
- Solanum tuberosum: Soltu.DM.09G031100, Soltu.DM.05G009720, Soltu.DM.09G021240, Soltu.DM.09G030280
Sequences
DNA Sequence
- >Sw-5
ATGGCTGAAAATGAAATTGAGGAAATGTTAGAGCACCTGAGAAGGATCAAGAGTGGAGGTGATCTGGATTGGCTCGACATATTGCGAATTGAAGAACTTGAAATGGTGCTAAGAGTTTTTAGAACCTTTACAAAGTATCATGATGTTCTTTTGCCTGATTCCTTAGTCGAACTCACAAAGAGGGCCAAATTGACTGGGGAAATACTTCACCGGGTGTTGGGTAGGATTCCACATAAATGTAAAACTAACCTTAATCTGGAAAGGCTAGAATCACATTTGTTGGAATTCTTTCAAGGTAATACGGCAAGTTTAAGTCACAATTATGAGTTGAATGATTTTGATCTGTCGAAATATATGGATTGTCTGGAAAATTTTCTAAATGATGTACTGATGATGTTCTTGCAAAAGGATAGGTTCTTCCATTCCAGAGAACAACTTGCAAAACATCGATCAATAAAGGAACTGAAAATTGTTCAAAAGAAAATAAGATTTTTGAAATACATATATGCCACAGAGATAAATGGTTATGTCGACTATGAGAAGCAGGAATGTTTGGAGACTCGAATTCAGTTCATGACTAACACTGTGGGACAATATTGTTTGGCAGTATTAGATTATGTCACTGAGGGTAAACTTAATGAAGAAAATGACAACTTTAGTAAACCTCCTTACCTATTATCATTGATTGTGTTAGTGGAGCTGGAAATGAAGAAGATTTTTCATGGTGAAGTAAAGGCTTCAAAGTTTACTCAATCAAAAACTTTCAAGGACAAGAAATTACCAAAAGGATTTTCACATCATCTCCACAATCTGTTGATGTATCTCAGAAACAAAAAGCTCGAGAATTTTCCTAATAATATCGCTGCTCAAAATATTGATGTGGCAATAGAGTTCTTGTTGGTTTTCCTTGATGCTGATGTGTCAAATCATGTTATTAATGGTAACTGGTTGAAAGAGGTCTTGTTAAAGGTTGGAGCTATAGCGGGTGATATTCTATATGTAATTCAAAAGCTTCTTCCTAGATCAATAAACAAAGATGAAACTAGCAACATAAGTCTTTGCTCAATACAGATATTGGAGAAGACTAAAGATCTGAAGGCACAAGTTGAGACGTACTACAAATCCTTAAAATTTACTCCATCTCAGTTCCCCACCTTTGGTGGATTGAGCTTTCTGGATTCTCTTTTAAGGAAACTGAATGAGATGTCGACATCTAAGTCCGGATTAGGTTTCCTGATGAAACCTCTTTTAGGGAATTTGGAGAAAGAGCTATCATCTCTTACATCCATTTTAGAGAAGGAGCTCTCATCCATTTTCAGTGATGTCGTGCACCATGAACATAACATTCCTAAAGATCTTCAGAGACGTACCATCAATTTGGCATATGAGGCAGAGGTTGCTATTGATTCTATTCTTGCTCAGTATAATGCTTTTTTGCATATTTTTTGCTCACTTCCTACAATTGTAAAAGAGATCAAGCAAATTAATGTAGAGGTGACTGAGATGTGGTCAACGGACATTCCTCTTAATCCTCACTATGTGGCTGCTCCATTAAAACATCTGCCGGATCGACATAGCAATCTTGTAACTGATGAGGAGGTAGTGGGTTTTGAGAAACAAGCAGAAGAACTAATTGATTATCTGACTAGAGGTACAAATGAGCTAGACGTTGTCCCAATTGTAGGCATGGGAGGACAAGGGAAAACGACAATTGCTAGAAAGTTGTACAATAATGACATTATTGTTTCTCGCTTTGATGTTCGAGCATGGTGCATCATTTCTCAAACGTATAACCGGATAGAGTTATTACAAGATATTTTCAGTCAAGTTACAGGTTTCAACGACAATGGAGCTACGGTTGATGTTCTTGCCGACATGTTGAGGAGAAAATTAATGGGAAAGAGATATCTCATTGTATTGGATGATATGTGGGATTGTATGGTATGGGATGACTTAAGGCTTTCTTTTCCAGATGTTGGAATTAGAAGCAGAATAGTCGTAACAACTCGACTTGAAGAAGTGGGTAAGCAAGTCAAGTACCATACTGATCCTTATTCTCTTCCATTCCTCACAACAGAAGAGAGTTGCCAATTGTTGCAGAAAAAAGTGTTTCAAAAGGAAGATTGCCCGCTTGAACTACAAGATGTGAGTCAAGCAGTAGCAGAAAAATGCAAAGGACTGCCCCTAGTGGTTGTCTTGGTAGCTGGAATAATCAAAAAAAGGAAAATGGAAGAATCTTGGTGGAATGAGGTGAAAGATGCTTTATTTGACTATCTTGACAGTGAGTTCGAAGAATATAGTCTGGCGACTATGCAGTTGAGTTTTGATAACTTACCCCACTGTTTAAAGCCTTGTCTTCTTTATATGGGAATGTTTTCGGAGGACGCAAGAATTCCAGCATCTACATTGATAAGTTTATGGATTGCTGAAGGATTCGTGGAGAACACTGAATCTGGGAGATTAATGGAAGAGGAAGCTGAAGGTTACTTGATGGATCTCATTAGCAGTAACTTGGTAATGCTTTCAAAGAGAAGTTATAAGGGTAAAGTCAAATACTGTCAGGTTCATGATGTTGTGCATCACTTTTGCTTGGAAAAGAGTAGAGAAGCAAAGTTTATGCTTGCAGTGAAGGGTCAATGTATCCAGTTTCAACCTTCGGATTGGAAGGGAACTCGAGTGAGCTTCAGTTTTAGTGAAGAGCTTTCCAAGTTTGCATCTCTGGTCTCCAAAACACAGAAGCCTTTCCATCAACACTTGAGGTCATTGATAACGACCAATCGAGCAAAATCTATTGATGTGATTCTCTTCTGTCAGATTAGTGAATTGCGACTTCTTAAAGTCTTGGATTTGAGTTCTTATACTGTGGAGTTTTTGTCATTAGCTAAGTTCAAACCACTAAATCAGCTGAAGTACCTCGCAGTTAAGGCTGATAAATTCTATTTTGATCCAGGATCACATCTTCCCCATATAGAAACTTTCATTGTAAAGAATTTTTGTTATGGTATGGGGTTACCAGTGTCTTTTTGGGAAATGAAAAAATTAAGGCATGCTCATTTTGGTAATGCTGAATTTGATAAGCAGGGGCTCTTTGAAGGATCCTCTACATTGGAAAATTTGAGGATATTAAAGAATATTATTGGATTTGATGGGGTGGATGTGTTATCAAGGAGGTGTCCTAATCTTCAACAACTTCAAATCACATATTTTGGAAATGATGAAGAGCCTTTTACTCCCAAACTGGAGAATCTTACCCAGCTTCAACAACTTCAACTTTCCTTTGCGCGTCCCCACACTCTATCCGGGTTACAGTTGCCTTCAAATTTAAATAAGTTGGTACTTGAAGGAATTCATATAGAAAGTGTTATTTCCTTCATTGCGGGACTACCAAGCCTGGAATATCTCCAATTACAGGATGTGTGTTTTCCTCAATCAGAAGAGTGGTGCCTTGGAGATATCACGTTCCCTAAACTTAAGTTGTTGAAACTGGTGAACTTACCGATCTCAAGGTGGGATGTCTCAGAGGAATCATTTCCGTTGCTTGAAACATTCGTTATAAAGAAGTGCGATGACCTAGAGGAGATCCCACTTAGCTTTGTTGATATTCCAACATTGGAACAGATTAAATTGATTGGGTCCTGGAAAGTATCTCTGGAGGATTCAGCTGTGAGAATGAAGGAAGAAATCAAAGAGATTGAAGGATGTGATCGTTTACACCTCGTCAAACAACGCTATGATTGA
Protein Sequence
- >Sw-5
MAENEIEEMLEHLRRIKSGGDLDWLDILRIEELEMVLRVFRTFTKYHDVLLPDSLVELTKRAKLTGEILHRVLGRIPHKCKTNLNLERLESHLLEFFQGNTASLSHNYELNDFDLSKYMDCLENFLNDVLMMFLQKDRFFHSREQLAKHRSIKELKIVQKKIRFLKYIYATEINGYVDYEKQECLETRIQFMTNTVGQYCLAVLDYVTEGKLNEENDNFSKPPYLLSLIVLVELEMKKIFHGEVKASKFTQSKTFKDKKLPKGFSHHLHNLLMYLRNKKLENFPNNIAAQNIDVAIEFLLVFLDADVSNHVINGNWLKEVLLKVGAIAGDILYVIQKLLPRSINKDETSNISLCSIQILEKTKDLKAQVETYYKSLKFTPSQFPTFGGLSFLDSLLRKLNEMSTSKSGLGFLMKPLLGNLEKELSSLTSILEKELSSIFSDVVHHEHNIPKDLQRRTINLAYEAEVAIDSILAQYNAFLHIFCSLPTIVKEIKQINVEVTEMWSTDIPLNPHYVAAPLKHLPDRHSNLVTDEEVVGFEKQAEELIDYLTRGTNELDVVPIVGMGGQGKTTIARKLYNNDIIVSRFDVRAWCIISQTYNRIELLQDIFSQVTGFNDNGATVDVLADMLRRKLMGKRYLIVLDDMWDCMVWDDLRLSFPDVGIRSRIVVTTRLEEVGKQVKYHTDPYSLPFLTTEESCQLLQKKVFQKEDCPLELQDVSQAVAEKCKGLPLVVVLVAGIIKKRKMEESWWNEVKDALFDYLDSEFEEYSLATMQLSFDNLPHCLKPCLLYMGMFSEDARIPASTLISLWIAEGFVENTESGRLMEEEAEGYLMDLISSNLVMLSKRSYKGKVKYCQVHDVVHHFCLEKSREAKFMLAVKGQCIQFQPSDWKGTRVSFSFSEELSKFASLVSKTQKPFHQHLRSLITTNRAKSIDVILFCQISELRLLKVLDLSSYTVEFLSLAKFKPLNQLKYLAVKADKFYFDPGSHLPHIETFIVKNFCYGMGLPVSFWEMKKLRHAHFGNAEFDKQGLFEGSSTLENLRILKNIIGFDGVDVLSRRCPNLQQLQITYFGNDEEPFTPKLENLTQLQQLQLSFARPHTLSGLQLPSNLNKLVLEGIHIESVISFIAGLPSLEYLQLQDVCFPQSEEWCLGDITFPKLKLLKLVNLPISRWDVSEESFPLLETFVIKKCDDLEEIPLSFVDIPTLEQIKLIGSWKVSLEDSAVRMKEEIKEIEGCDRLHLVKQRYD