Information report for RY-1
Gene Details
Domain Class Descriptions
- Contains a central nucleotide-binding (NB) subdomain as part of a larger entity called the NB-ARC domain. C-terminal to the NB-ARC domain lies a leucine-rich repeat (LRR) domain, which is sometimes followed by an extension of variable length. Hence, this group of R proteins is collectively referred to as NB-LRR proteins. If N-terminal region shows homology to the protein domain Interleukin-1 Receptor (IL-1R), called the TIR domain, these proteins are referred to as TIR-NB-LRR or TNL.
Domain Features
- Domain Class: TNL
- Domain types: NBS TM TIR LRR
Gene Resources
- GenBank: 16944810
- GenBank Locus: AJ300266
- UniProt: Q93YA6
- EMBL: AJ300266
- AlphaFoldDB: Q93YA6
- InterPro: IPR000157 , IPR001611 , IPR002182 , IPR027417 , IPR032675 , IPR035897 , IPR042197 , IPR044974 , IPR045344
- PANTHER: PTHR11017 , PTHR11017:SF324
- SUPFAM: SSF52047 , SSF52058 , SSF52200 , SSF52540
- PROSITE: PS50104 , PS51450
- Gene3D: 1.10.8.430 , 3.40.50.10140 , 3.40.50.300 , 3.80.10.10
Homologs
- Capsicum annuum: T459_29566, T459_29154, T459_29155, T459_29156
- Nicotiana attenuata: A4A49_09076, A4A49_08346, A4A49_36607, A4A49_32821, A4A49_22884
- Solanum lycopersicum: Solyc11g011080.2, Solyc11g011060.2, Solyc05g007850.2, Bs4, Solyc08g005510.2, Solyc01g008800.2, Solyc11g011350.2, Solyc01g066020.2, Solyc04g056570.3, Solyc04g007320.2
Sequences
DNA Sequence
- >RY-1
ATGGCATCATCATCTTCTTCTTCTGAGAGTAATTCACAGTATTCATGTCCTCAACGGAAGTACAAGTACGATGTGTTTCTAAGTTTTAGAGATGATAAAAGGCTAGAGAATGGTGATTCCCTCTCGAAAGAACTAGTGAAAGCTATAAAAGAGTCTCAAGTTGCTGTAATCATCTTCTCAAAGAATTATGCTACGTCGAGGTGGTGCCTGAATGAAGTAGTGAAGATTATGGAATGCAAGGAAGAGAATGGACAATTAGTCATACCAGTCTTCTATGATGTGGATCCATCAGATGTTCGGAAGCAAACGAAGAGCTTTGCAGAAGCCTTTGCCGAACACGAATCGAGGTATAAGGATGATGTTGAAGGAATGCAGAAGGTGCAACGATGGAGGACTGCTCTAAGTGAAGCTGCAGATCTAAAAGGATATGATATCCGTGAAAGGATTGAATCAGAATGTATTGGGGAACTTGTTAATGAAATTTCGCCCAAATTATGCGAGACTTCTTTATCTTATTTGACAGATGTTGTGGGAATAGATGCTCATTTAAAGAAAGTCAACTCCCTTCTAGAGATGAAAATCGATGATGTTCGGATTGTGTGGATCTGGGGAATGGGGGGAGTTGGTAAAACGACAATAGCAAGAGCTATTTTTGATATACTCTCATCTAAATTTGATGGTGCTTGTTTCCTTCCGGACAATAAAGAAAACAAGTATGAAATACATTCTCTGCAAAGTATCCTTCTCTCTAAACTGGTAGGGGAAAAAGAAAATTGTGTGCATGATAAGGAGGACGGGAGGCACCTGATGGCTCGTAGACTTCGTTTGAAGAAAGTTCTAGTTGTGCTTGATAACATAGATCATGAAGACCAATTGAAATACCTAGCAGGGGATCTTGGTTGGTTTGGCAATGGCACCAGAATTATTGCAACAACGAGAGACAAGCATTTCATTCGGAAAAATGATGCCGTATATCCTGTGACTACACTACTTGAACATGATGCTGTTCAGTTGTTCAACCAATATGCTTTCAAAAATGAAGTTCCAGATAAGTGTTTCGAGGAGATAACGTTGGAGGTAGTAAGTCATGCTGAAGGCCTTCCTTTAGCCCTGAAAGTGTGGGGTTCTTCCTTACATAAGAAGGATATACATGTGTGGAGGAGTGCTGTTGATCGAATAAAGAGGAACCCTAGTTCAAAAGTTGTTGAAAACCTCAAAGTAAGTTATGATGGGTTGGAGCGCGAAGATCAAGAGATATTTCTAGATATTGCATGCTTCTTAAGAGGGAGAAAACAAACCGAGATCAAGCAAATTCTTGAGAGCTGTGATTTTGGAGCTGATGACGGATTGAGGGTGCTGATTGACAAGTCTCTTGTGTTCATCTCTGAATATGATACGATTCAAATGCATGACTTAATACAAGAGATGGGTAAATACATAGTGACAATGCAAAAGGATCGGGGAGAAGTCACTAGACTATGGCTCACTCAAGATTTCGAAAAATTCTCAAATGCAAAAATACAAGGGACCAAGGCTATCGAAGCAATCTGGATACCAGAAATTCAAGACCTAAGCTTTAGAAAAAAGGCCATGAAAGATGTGGAAAAGCTTAGGATATTATACATCAATGGTTTTCATACACCTGATGGCTCCAACGATCAGTACCTTCCCAGCAACTTGCGCTGGTTCGACTGTTGTAAGTATCCTTGGGAATCATTGCCAGCCAAATTTGATCCTGACATGCTTGTTCATCTTGATCTCCAGCAGAGTTCACTGTTTCATTTATGGACTGGAACAAAGAAATTTCCTTTTCTACGGAGGCTAGATCTCAGCAGCTGTGCAAACCTGATGCGAACACCAGATTTCACGGATATGCCAAATTTGGAGTATTTGGGTCTGGAAGAGTGTAGTAATCTTAAAGAGGTTCATCATTCCCTGAGATGTTCCAAAAAACTCATTAAGTTAAATTTGAGAGATTGTAAAAACCTTGAGAGTTTTAGCTATGTTTGTTGGGAATCTCTTGAATGTCTACATCTACAAGGTTGCTCTAATTTAGAGAAATTTCCGAGGATCCGGGGAAAATTGAAGCCGGAGATAGAGATTCAAGTGCAACGCTCTGGGATAAGGAAACTACCATCAGCTATTATTCAGCACCAGTCTAGTCTTACAGAGCTAGATTTGAGTGGCATGAAAAACCTTGCAACACTTTCATGCAGCATTGGCGAGTTGAAAAGTTTGGTGATGCTAAAAGTGTCCTACTGCTCAAAACTCAAAAGCTTGCCAGAAGAGATAGGTGATTTAGAAAACTTGGAGATACTTAAGGCCGGATATACTCTAATCTCACAACCTCCGTCTTCCATCGTTCGCTTGAACAGGCTTAAATTTTTGACTTTTGCAAAACAAAAATCAGAAGTAGGCCTCGAAGATGAAGTGCACTTTGTCTTCCCTCCGGTGAATCAGGGATTATGCTCATTGAAAACTTTGAATCTCAGTTACTGCAATCTAAAAGACGAAGGACTTCCGCAAGACATCGGAAGCTTATCCTCTTTGGAAGTGTTGAATCTGAGGGGAAATAATTTTGAGCATTTGCCTCAAAGCTTGACCCGACTTAGTTCTCTTCAGTCCTTGGACTTATTAGATTGCAAGAGTCTTACACAGCTGCCGGAATTTCCACGGCAATTAGACACAATATATGCAGATTGGAACAATGATTCGATCTGTAATTCGTTGTTTCAAAATATCTCATCATTCCAGCATGACATCTGTGCTTCAGATTCCTTGTCACTAAGAGTGTTTACCAATGAGTGGAAAAATATCCCGAGATGGTTCCACCATCAGGGAAAAGATAAAAGTGTATCAGTCAAATTGCCTGAAAATTGGTATGTGTGCGATAACTTCTTGGGATTTGCTGTATGTTACTCTGGCTGCTTAATTGAAACCACAGCTCAATTCTTATGTGATGAGGGGATGCCGTGTATCACACAGAAACTTGCCTTACCCAAACATTCAGAAGAATTTCCAGAATCTGCTATTCATTTTTTCTTGGTACCTTCTGCTGGCTTATTGGATACATCTAAGGCAAACGGAAAAACACCAAATGATTATAGGCACATTATGTTATCTTTTTCGGAAGAGTTGAAGGAGTTTGGACTTCGTTTGTTGTATAGAGATGAATCTAAGCTTAAGGCCTTGTTTAAAATGACGGAAAATAATGATGAACCAACAGAATATTGCGTCGTGAAAAGGAGGGGTCAATATGATGAGGCCAGATGCTCCTCTTCTAAGAAACAAAGGTCACAGCTCTAA
Protein Sequence
- >RY-1
MASSSSSSESNSQYSCPQRKYKYDVFLSFRDDKRLENGDSLSKELVKAIKESQVAVIIFSKNYATSRWCLNEVVKIMECKEENGQLVIPVFYDVDPSDVRKQTKSFAEAFAEHESRYKDDVEGMQKVQRWRTALSEAADLKGYDIRERIESECIGELVNEISPKLCETSLSYLTDVVGIDAHLKKVNSLLEMKIDDVRIVWIWGMGGVGKTTIARAIFDILSSKFDGACFLPDNKENKYEIHSLQSILLSKLVGEKENCVHDKEDGRHLMARRLRLKKVLVVLDNIDHEDQLKYLAGDLGWFGNGTRIIATTRDKHFIRKNDAVYPVTTLLEHDAVQLFNQYAFKNEVPDKCFEEITLEVVSHAEGLPLALKVWGSSLHKKDIHVWRSAVDRIKRNPSSKVVENLKVSYDGLEREDQEIFLDIACFLRGRKQTEIKQILESCDFGADDGLRVLIDKSLVFISEYDTIQMHDLIQEMGKYIVTMQKDRGEVTRLWLTQDFEKFSNAKIQGTKAIEAIWIPEIQDLSFRKKAMKDVEKLRILYINGFHTPDGSNDQYLPSNLRWFDCCKYPWESLPAKFDPDMLVHLDLQQSSLFHLWTGTKKFPFLRRLDLSSCANLMRTPDFTDMPNLEYLGLEECSNLKEVHHSLRCSKKLIKLNLRDCKNLESFSYVCWESLECLHLQGCSNLEKFPRIRGKLKPEIEIQVQRSGIRKLPSAIIQHQSSLTELDLSGMKNLATLSCSIGELKSLVMLKVSYCSKLKSLPEEIGDLENLEILKAGYTLISQPPSSIVRLNRLKFLTFAKQKSEVGLEDEVHFVFPPVNQGLCSLKTLNLSYCNLKDEGLPQDIGSLSSLEVLNLRGNNFEHLPQSLTRLSSLQSLDLLDCKSLTQLPEFPRQLDTIYADWNNDSICNSLFQNISSFQHDICASDSLSLRVFTNEWKNIPRWFHHQGKDKSVSVKLPENWYVCDNFLGFAVCYSGCLIETTAQFLCDEGMPCITQKLALPKHSEEFPESAIHFFLVPSAGLLDTSKANGKTPNDYRHIMLSFSEELKEFGLRLLYRDESKLKALFKMTENNDEPTEYCVVKRRGQYDEARCSSSKKQRSQL