Information report for R3a
Gene Details
Domain Class Descriptions
- Contains a central nucleotide-binding (NB) subdomain as part of a larger entity called the NB-ARC domain. C-terminal to the NB-ARC domain lies a leucine-rich repeat (LRR) domain, which is sometimes followed by an extension of variable length. Hence, this group of R proteins is collectively referred to as NB-LRR proteins. If N-terminal region contain a predicted coiled-coil structures (CC), non-TIR NB-LRR proteins are collectively referred to as CC-NB-LRR or CNL.
Domain Features
- Domain Class: NL
- Domain types: CC NBS TM LRR
Gene Resources
- GenBank: 57233496
- GenBank Locus: AY849382
- UniProt: Q5I6L8
- EMBL: AY849382
- InterPro: IPR002182 , IPR003591 , IPR027417 , IPR032675 , IPR036388 , IPR041118 , IPR042197 , IPR055414
- PANTHER: PTHR36766 , PTHR36766:SF51
- SUPFAM: SSF52058 , SSF52540
- Gene3D: 1.10.10.10 , 1.10.8.430 , 1.20.5.4130 , 3.40.50.300 , 3.80.10.10
- SMR: Q5I6L8
Homologs
- Capsicum annuum: T459_28802, T459_28601, T459_34775, T459_28586, T459_13756, T459_34774, T459_28360, T459_28927, T459_28462, T459_28747, T459_33340, T459_28913, T459_00580, T459_34386
- Nicotiana attenuata: A4A49_30125, A4A49_31860, A4A49_41833
- Solanum lycopersicum: Solyc11g071995.1, I-2, Solyc08g007630.1, Solyc11g069620.2, Solyc11g069925.1, Solyc11g068360.1, Solyc11g071423.1
Sequences
DNA Sequence
- >R3a
ATGGAGATTGGCTTAGCAGTTGGTGGTGCATTTCTCTCTTCAGCTTTGAATGTTCTCTTTGATAGGCTTGCTCCTCACGGTGATCTGCTCAACATGTTTCAGAAGCATAAGGATCATGTTAAGCTCTTAAAGAAGCTGGAGGACATTTTGCTCGGTCTTCAGATTGTGCTAAGTGATGCAGAGAATAAACAAGCATCAAATCGACATGTGAGCCAGTGGTTCAATAAGCTTCAGAATGCTGTGGACGGTGCTGAGAACTTGATAGAACAAGTCAATTATGAAGCTTTGAGGCTTAAGGTGGAAGGCCAGCATCAAAATCTTGCAGAAACAAGCAACCAGCAAGTAAGTGACCTTAACCTGTGCTTCAGTGATGATTTCTTTCTTAACATAAAGGATAAGTTGGAAGAAACCATTGAAACATTGGAGGTGTTGGAAAAGCAAATTGGTCGCCTTGGCTTAAAGGAACATTTTGGTTCGACTAAACAAGAAACTAGAACACCTTCAACTTCTTTAGTTGATGACTCTGATATCTTTGGAAGGCAGAATGATATAGAGGATTTGATTGACCGTTTATTATCTGAAGATGCAAGTGGAAAAAAGCGGACTGTAGTTCCTATTGTTGGAATGGGTGGTCTGGGTAAGACAACACTTGCTAAAGCGGTTTACAATGATGAGAGAGTGCAGATACATTTTGGTTTGAAAGCTTGGTTTTGTGTTTCTGAGGCATTTGATGCTTTCAGAATAACAAAAGGGTTACTTCAAGAAATTGGCTCATTTGACTTGAAGGCTGATGACAATCTTAATCAGCTACAAGTCAAATTGAAGGAAAGATTAAAGGGAAAGAAGTTTCTTATAGTTTTGGATGATGTGTGGAATGACAACTACAACAAGTGGGATGAATTGAGAAATGTTTTTGTACAAGGAGATATAGGAAGTAAGATCATTGTGACGACACGTAAAGAGAGTGTTGCCTTGATGATGGGAAATGAGCAAATTAGCATGGACAATTTGTCTACTGAATCCTCTTGGTCTTTATTTAAAACACATGCATTTGAAAACATGGGTCCTATGGGACATCCGGAACTTGAAGAGGTCGGGAAACAAATTGCAGCTAAGTGCAAAGGACTGCCCTTAGCTCTGAAGACGCTCGCTGGCATGTTACGCTCCAAATCAGAGGTTGAAGAGTGGAAACGTATTTTGAGAAGTGAAATATGGGAGCTGCCACACAATGACATATTACCAGCGTTGATGTTGAGCTACAATGATCTTCCCGCACATTTAAAGCGATGTTTTTCCTTTTGTGCAATATTTCCTAAAGATTATCCCTTTAGGAAAGAACAAGTTATTCATCTGTGGATTGCCAATGGTCTCGTACCACAGGAAGATGTAATAATTGAAGATTCAGGCAACCAATACTTTCTCGAGTTGAGGTCAAGATCATTATTCGAAAGGGTCCCAAATCCTTCTCAAGGGAACACAGAGAATTTATTCTTAATGCATGACCTTGTCAATGATTTAGCGCAAATTGCATCTTCAAAACTTTGTATCAGGTTGGAAGAGAGCCAAGGATCTCATATGTTGGAACAAAGTCAACACTTATCATATTCAATGGGATATGGTGGTGAGTTTGAGAAATTGACACCCCTCTACAAATTGGAGCAGCTGAGGACATTGCTTCCGACATGTATTGATCTCCCTGATTGTTGTCACCATCTAAGCAAGAGGGTGCTACATAACATACTGCCAAGACTAACATCCTTAAGGGCATTATCGTTGTCATGCTATGAGATTGTTGAGTTGCCAAATGACTTGTTTATCAAATTAAAGCTCCTCAGATTTTTGGATATTTCTCGGACAGAGATTAAAAGGTTGCCAGATTCCATTTGTGCATTGTATAACTTAGAGACACTTCTCCTGTCATCTTGTTATGATCTTGAGGAGCTACCGCTGCAGATGGAGAAGCTGATTAACTTGCGTCATCTTGACATAAGCAACACTCGTCTCTTGAAGATGCCGCTACATCTGAGCAAGTTGAAAAGCCTCCAAGTGTTAGTGGGAGCCAAATTTCTTATAGGTGGTTTGAGAATGGAAGATTTGGGTGAAGTACATAACTTGTACGGATCTCTATCAGTTGTAGAGTTGCAAAATGTGGTTGATAGAAGGGAAGCTGTGAAGGCAAAGATGAGGGAGAAGAATCACGTCGACAGGTTATATTTGGAGTGGAGTGGAAGTAGTAGTGCCGACAATTCACAAACAGAAAGAGACATACTTGATGAGCTACGCCCCCATAAAAACATAAAAGTAGTCAAAATCACTGGATATAGAGGGACAAACTTTCCCAATTGGCTAGCTGATCCTTTGTTTCTTAAGCTGGTAAAATTGTCTCTTAGAAACTGCAAGAACTGTTATTCATTGCCAGCACTAGGACAACTCCCTTTTCTGAAATTCCTTTCGATTAGAGAGATGCATGGAATAACAGAGGTGACGGAAGAATTCTATGGCAGTTGGTCCTCCAAAAAGCCTTTTAACTGTCTTGAGAAGCTTGAATTTAAAGATATGCCGGAGTGGAAGCAATGGGACCTACTAGGAAGTGGAGAGTTCCCTATACTTGAGAAGCTTTTGATTGAAAATTGCCCTGAACTCAGTTTGGAGACGGTACCCATCCAACTTTCAAGTTTAAAAAGTTTTGACGTAATTGGTTCTCCCTTGGTTATAAACTTTCCTTTAAGCATACTGCCCACTACCTTGAAGAGAATAAAGATATCTGATTGCCAGAAATTGAAATTGGAACAGCCAACTGGTGAGATTAGTATGTTTCTGGAGGAATTGACACTGATTAAATGTGATTGTATAGATGATATATCACCTGAGTTACTCCCAAGAGCACGCAAATTGTGGGTACAGGATTGGCACAACCTTACTAGGTTTTTGATTCCTACTGCCACTGAAACTCTCGATATTTGGAATTGTGAGAATGTTGAAATACTTTCGGTGGCATGTGGGGGGACCCAGATGACGTCACTGACTATTGCCTACTGTAAGAAGCTGAAGTGGCTGCCAGAACGTATGCAGGAACTCCTTCCATCTCTTAAGGAACTGCATCTGTCTAATTGTCCAGAAATAGAGTCCTTTCCTGAAGGTGGATTGCCCTTCAATTTACAACAACTTGCGATCAGATATTGCAAGAAACTGGTGAACGGCCGAAAGGAGTGGCATTTACAGAGACGACTCTGTCTCACAGCGTTAATCATCTACCATGATGGCAGTGACGAAGAGATTGTTGGTGGTGAGAATTGGGAGTTGCCTTCCTCTATTCAAAGGCTTACCATAGTGAATCTGAAAACATTAAGCAGCCAACATCTCAAAAACCTCACCTCTCTTCAATATCTATTTATTAGGGGTAATTTACCTCAGATTCAGCCAATGCTGGAACAAGGCCAGTGTTCGCACCTCACTTCGCTTCAAAGTCTACAAATCTCCTCCCTCCAATCACTTCCTGAATCGGCACTGCCCTCCTCCCTCTCTCACCTGGAGATCTCCCATTGCCCTAATCTCCAATCACTTCCTGAATCGGCACTGCCCTCCTCCCTCTCTCAGCTGACCATCAATAATTGCCCTAATCTCCAATCACTTTCCGAATCAACACTGCCCTCCTCCCTCTCTCAGCTGGAGATCTCCTTTTGCCCTAATCTCCAATATCTTCCACTAAAAGGGATGCCCTCTTCCCTCTCTGAACTATCTATTTACAAATGCCCATTGCTCAAACCACAACTAGAATTTGACAAGGGGGAATACTGGCCAAATATTGCTCAATTTCCCACCATAAAGATCGATAGGGAATGCATGTGA
Protein Sequence
- >R3a
MEIGLAVGGAFLSSALNVLFDRLAPHGDLLNMFQKHKDHVKLLKKLEDILLGLQIVLSDAENKQASNRHVSQWFNKLQNAVDGAENLIEQVNYEALRLKVEGQHQNLAETSNQQVSDLNLCFSDDFFLNIKDKLEETIETLEVLEKQIGRLGLKEHFGSTKQETRTPSTSLVDDSDIFGRQNDIEDLIDRLLSEDASGKKRTVVPIVGMGGLGKTTLAKAVYNDERVQIHFGLKAWFCVSEAFDAFRITKGLLQEIGSFDLKADDNLNQLQVKLKERLKGKKFLIVLDDVWNDNYNKWDELRNVFVQGDIGSKIIVTTRKESVALMMGNEQISMDNLSTESSWSLFKTHAFENMGPMGHPELEEVGKQIAAKCKGLPLALKTLAGMLRSKSEVEEWKRILRSEIWELPHNDILPALMLSYNDLPAHLKRCFSFCAIFPKDYPFRKEQVIHLWIANGLVPQEDVIIEDSGNQYFLELRSRSLFERVPNPSQGNTENLFLMHDLVNDLAQIASSKLCIRLEESQGSHMLEQSQHLSYSMGYGGEFEKLTPLYKLEQLRTLLPTCIDLPDCCHHLSKRVLHNILPRLTSLRALSLSCYEIVELPNDLFIKLKLLRFLDISRTEIKRLPDSICALYNLETLLLSSCYDLEELPLQMEKLINLRHLDISNTRLLKMPLHLSKLKSLQVLVGAKFLIGGLRMEDLGEVHNLYGSLSVVELQNVVDRREAVKAKMREKNHVDRLYLEWSGSSSADNSQTERDILDELRPHKNIKVVKITGYRGTNFPNWLADPLFLKLVKLSLRNCKNCYSLPALGQLPFLKFLSIREMHGITEVTEEFYGSWSSKKPFNCLEKLEFKDMPEWKQWDLLGSGEFPILEKLLIENCPELSLETVPIQLSSLKSFDVIGSPLVINFPLSILPTTLKRIKISDCQKLKLEQPTGEISMFLEELTLIKCDCIDDISPELLPRARKLWVQDWHNLTRFLIPTATETLDIWNCENVEILSVACGGTQMTSLTIAYCKKLKWLPERMQELLPSLKELHLSNCPEIESFPEGGLPFNLQQLAIRYCKKLVNGRKEWHLQRRLCLTALIIYHDGSDEEIVGGENWELPSSIQRLTIVNLKTLSSQHLKNLTSLQYLFIRGNLPQIQPMLEQGQCSHLTSLQSLQISSLQSLPESALPSSLSHLEISHCPNLQSLPESALPSSLSQLTINNCPNLQSLSESTLPSSLSQLEISFCPNLQYLPLKGMPSSLSELSIYKCPLLKPQLEFDKGEYWPNIAQFPTIKIDRECM