Information report for Vradi09g05990
Gene Details
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Functional Annotation
- RNA binding protein which cotranscriptional splicing of a key floral repressor gene FLOWERING LOCUS C (FLC), , facilitates R-loop formation near FLC intron I to repress its transcription, thereby promoting the floral transition. inhibition of cotranscriptional splicing of FLC by nuclear HRLP condensates constitutes the molecular basis for down-regulation of FLC transcript levels.
Homologous
- Actinidia chinensis: CEY00_Acc16140
- Citrullus lanatus: Cla97C05G083680
- Cucumis melo: MELO3C006286
- Glycine max: Glyma.03G107700, Glyma.07G119000, Glyma.09G245000
- Gossypium hirsutum: Gohir.A11G074700, Gohir.D11G079300
- Juglans regia: Jr05_02460, Jr05_02450, Jr14_02920
- Medicago truncatula: Medtr8g007390
- Prunus avium: Pav_sc0002465.1_g050.1.mk
- Prunus persica: PRUPE_2G120600
Sequences
CDS Sequence
- >Vradi09g05990
ATGCCTCCTAAAGCGACGAAGCGTGGGTCCGCGTCAAGCGCCTCAAAGAGGGGTGGCAGAGGGGGCAGGGGAATCTCCAAGGGTGCGCAGAGCCAGCAGCACCATGAACCTGCGGAAGAGGTAGTGAAGGTCGAGGAGAAGCAACCCATTGTTGTTGCTGAGGAGGAACAACCCAAGGCGATGGAAGAAGAGCACCCTTTGGTTGAAGAGAAACAGCTTGTGGTTGAAGAGAAGGAATCTGTTGTGGTGGTTGAGGATAAGGCTATTGATATGAACCAAATGGCTCCGGAGGCTGTGGAAGAAGCGTCCCATCTTGCTAATGGATTGACCGCCTTGAAAAACAATGAAGAGGATGTTAAGGAATCCATAGATGAATATGAGAAAGACGAACGCTTAGATTTGGAGGATAATGATCCTGAGTATGAAGCTGAGGAGTATGGTGGAGTTGATTATGATGAGAAGGAAATTGAACAAGATGAGGGTCATGAGGTGGGCAATGAAGTAGAGGAAGAAGAGGCTGAGGATAATTTAGGAGAAGAAGAGGGTGATACAGGTGAGGAAGAGGTTGAAGATGTTCATGACGAACTTGAGGGTGAGGAGGAGCATGAGCATACTGGTGAGGAGCATGAGCACCCTGATTTTGCTGATGTGGATGAGGAGGAACATCGGGAAGTTGTGAAAGAGAGGCGGAAGCGGAAAGAGTTTGAAGTTTTTGTTGGTGGCTTGGACAAGGATGCTACTGAGAGTGATCTGAGGAAGGTATTTGGTGAAGTTGGGGTTGTTACAGAGGTCAGGTTGATGATGAATCCTCAGACTAAAAAGAACAAGGGATTTGCATTCTTGCGTTTTGAAACTGTGGAACAAGCTAAACGAGCTGTGTCAGAGCTCAGAAATCCTGTGATTAATGGCAAACAATGTGGTGTTACTCCTAGTCAGGACAGTGATACACTCTATTTGGGGAATATATGCAAGACATGGACAAAGGAAGCTTTAAAAGAGAAGCTGAAACATTATGGAGTTACAAATGTTGAGGATTTGACCTTGGTAGAAGATACTAATGATGAAGGAAAGAACCGTGGGTTTGCATTTTTAGAATTTTCCTCTCGTTCTGATGCTATGGATGGCTTTAAGCGACTGCAGAAGAGGGATGTAGTGTTTGGAGTTGATAAGCCTGCAAAAGTTTCTTTTGCAGATTCTTTTATTGACCCGGGTGATGAAATTATGGCACAGGTTAAAACTGTGTTTATTGATGCATTACCTCCTTCATGGGATGAAGATTATGTTCGTGATCTTCTCAAGAAATATGGAGAGATTGAAAAGATTGAGCTAGCCAGGAACATGCCAGCTGCACGTAGGAAGGATTATGGGTTTGTTACATTTGGCACACACGACGCTGCTGTAAAATGTGCTGATAGTATTACTGGCACAGAGTTGGGTGAAGGAGACAAGAAGGCAAAAGTTAGAGCAAGGTTGTCAAGACCACTTCAGAGAGGTCGTGGAAAACACATTAGTCGTGGTGACTATCGTTCTGGTCGAGGATCTGGAATGATGACAAGGCCTTCATGGAGCCGACCTTCTCCTCGTACTTTTACTCGTGGTGCAAGAGGAGTTGGAAGTCGAGCTCCACCTGCCAGACCAGTTAGTGTGAGAGATAGACGCCCTATCATGTCCATACCTGCAAGAAGTAGACCAGTGCCTCCTCCATCTAGATCTTATGATAGGAGACCAGTTGCACCTGCATATCCAAAAAGTAGCATGAAGAGAGATTATAGTCGGCGAGAGGATATACCACCTCCAAGAAGTAGAGTTCCTGTAGATTATGGCTCAAGGGTGGCTTCTGAAAGAAGGCCATCTTACAGGGATTATCCTGCCCGTGGTCCTGGTCCTGGCTACTCTGAGCTCCCTAGAAGCACGTCTCGGGCTGCACCGAGGAGGGGCTATGTGGATGAGGGATATAGCCAAAGATTTGAGAGGCCTCCACCTCCACCTCCTCCCCATATAAGCTACCGTGAAGGACGTCCCCGAGATTATGATACTCTGTCTGGCTCAAAACGTTCTTATGCTGCTATAGATGATGTTCCTCCTCGATATGCTGATACTGGTGCTCGCCAATCAAGAGCTCGATTGGACTATGACTATGGTGGTAGTGCTTCACAGTATGGAGATGCTTATGGTGATAGACTTGGAAGATCCAGTATGGGATATGGTGGTAGCAGCAGAAGCTCTATGTCTAGTCAAGATTCACATGGGATGTATAGTAGTCGACAGGGCATGAGTTATGGAGGTTCTTTTACTGGTGGTGATGTTGGTGGCTTGTACTCATCAAGTTATGGCAGTGATTACATTTCCCGTGGAAGTGATGTAAATGATCCTGACCTTTCTGAGTTGGTGGCAGCTCATATTCTTCAGTGTATTCAAGCAGGGGCGTGGGTGGTGGAAGCAGTTATATGGGTGGTGGAGGATCGGGCTCTTATTATTGAGGACAATGCTAAAGATGCATTGATGTCTTTCCTTAGTTAA
Protein Sequence
- >Vradi09g05990
MPPKATKRGSASSASKRGGRGGRGISKGAQSQQHHEPAEEVVKVEEKQPIVVAEEEQPKAMEEEHPLVEEKQLVVEEKESVVVVEDKAIDMNQMAPEAVEEASHLANGLTALKNNEEDVKESIDEYEKDERLDLEDNDPEYEAEEYGGVDYDEKEIEQDEGHEVGNEVEEEEAEDNLGEEEGDTGEEEVEDVHDELEGEEEHEHTGEEHEHPDFADVDEEEHREVVKERRKRKEFEVFVGGLDKDATESDLRKVFGEVGVVTEVRLMMNPQTKKNKGFAFLRFETVEQAKRAVSELRNPVINGKQCGVTPSQDSDTLYLGNICKTWTKEALKEKLKHYGVTNVEDLTLVEDTNDEGKNRGFAFLEFSSRSDAMDGFKRLQKRDVVFGVDKPAKVSFADSFIDPGDEIMAQVKTVFIDALPPSWDEDYVRDLLKKYGEIEKIELARNMPAARRKDYGFVTFGTHDAAVKCADSITGTELGEGDKKAKVRARLSRPLQRGRGKHISRGDYRSGRGSGMMTRPSWSRPSPRTFTRGARGVGSRAPPARPVSVRDRRPIMSIPARSRPVPPPSRSYDRRPVAPAYPKSSMKRDYSRREDIPPPRSRVPVDYGSRVASERRPSYRDYPARGPGPGYSELPRSTSRAAPRRGYVDEGYSQRFERPPPPPPPHISYREGRPRDYDTLSGSKRSYAAIDDVPPRYADTGARQSRARLDYDYGGSASQYGDAYGDRLGRSSMGYGGSSRSSMSSQDSHGMYSSRQGMSYGGSFTGGDVGGLYSSSYGSDYISRGSDVNDPDLSELVAAHILQCIQAGAWVVEAVIWVVEDRALIIEDNAKDALMSFLS