Information report for Vradi05g05790
Gene Details
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Functional Annotation
- Relative of Early Flowering 6 (REF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a positive regulator of flowering in an FLC-dependent pathway. REF6 mutants have hyperacetylation of histone H4 at the FLC locus. REF6 interacts with BES1 in a Y2H assay and in vitro. REF6 may play a role in brassinoteroid signaling by affecting histone methylation in the promoters of BR-responsive genes. It is most closely related to the JHDM3 subfamily of JmjN/C proteins.
Homologous
- Cicer arietinum: XP_004501832.1, XP_004515844.1
- Glycine max: Glyma.04G191900.1.p, Glyma.04G191900, Glyma.04G192000.3.p, Glyma.04G192000.1.p, Glyma.04G192000, Glyma.06G173800.1.p, Glyma.06G173800, Glyma.06G174000.2.p, Glyma.06G174000.1.p, Glyma.06G174000, Glyma.04G192000.2.p
- Lotus japonicus: Lj0g3v0351959.1, Lj4g3v1389260.1
- Medicago truncatula: Medtr3g075210.1, Medtr3g075210
Sequences
CDS Sequence
- >Vradi05g05790
ATGAGAGCCACGGAGAAGAAATCAGGGATAATGGGAGGGGGTTCTGAGGGTAGTGCCGACGTTTTGCCGTGGCTGAAATCGATGCCGGTGGCACCGGAGTACCGGCCGACTGCGGCAGAGTTCCAAGATCCAATCGGCTACATATTCAAGATCGAGAAGGAAGCGTCCAAGTACGGCATCTGCAAAATCATCCCTCCCTTCCCTCCTTCTCCAAAGAAAACCGCCATCGCCAACCTCAACCGCTCACTTGCCGTTTCAGGTTCCACATTCACCACGCGCCAGCAGCAGATCGGCTTCTGCCCCCGCCGGCCCCGCCCCGTGCAGCGCCCTGTCTGGCAGAGCGGTGACCACTATACCTTCACGGAGTTCGAGTTCAAAGCCAAGTCCTTCGAGAAAGCGTACCTCAAACGCCACACCAGAAAAGGTCCGAGTCCAGGCCCAGGTCTGACCCCACTTGAGACCGAAACGCTCTTCTGGAAGGCCACGCTGGACAAACCCTTCTCCGTGGAATACGCCAACGACATGCCGGGTTCCGCGTTCTCCCCCAAATGCCGGCACACAGGGGATCCCACTTCCCTTGCGGACACTCCTTGGAACATGCGAGCTGTTTCGCGGGCCACGGGCTCACTCTTGCGCTTCATGAAGGAGGAGATTCCCGGCGTTACTTCTCCAATGGTCTATGTTGCCATGCTCTTCAGCTGGTTCGCTTGGCATGTCGAGGACCACGACTTGCACAGCCTGAACTACCTCCACATGGGTGCCGGCAAGACCTGGTACGGCGTCCCTCGAGATGCTGCTGTCGCGTTTGAGGAGGTTGTTAGGGTTCACGGCTACGGTGGAGAAATTAATCCTCTCGTTACATTTGCTATTCTTGGTGAGAAAACCACGGTGATGTCGCCTGAAGTATTTCTCAGTGCAGGTGTTCCATGCTGCAGGTTAGTACAAAATGCTGGGGAATTTGTTGTGACGTTTCCAAGAGCCTATCACACAGGGTTTAGTCATGGTTTTAACTGTGGAGAGGCAGCGAACATTGCTACACCTGAGTGGTTGAGGGTTGCTAAAGATGCTGCCATTCGGAGGGCTTCGCTAAATTATCCTCCCATGGTTTCACATTTCCAGTTACTTTATGACCTTGCCTTAGCTTTGTGTTCTAGAATTCCTGCAAGCATCAGTGCTGAACCTCGTAGTTCTCGTCTTAAAGATAAGAAGAAGGGTGAAGGAGAAACTGTAATTAAAGAACTATTTGTCCAAGATGTGCTACAGAACAATGACCTGCTTCATATACTGGGGAAAGAATCTGCTGTAGTACTTCTACCTCGTAGCTCAGTTGACATTTCTGTTTGCTCAAAATTACGTGTTGGATCCCAGCAATCCATCAATGTAAGCAATTCTGAGGGAATGCATTCCTCAAAAGATTTTGTTTCTGATGATCTGGTATTCAACAGGAGTCATGGAATCAAGCAAGAAAAAACTTTCTATTCCGTGAAAGACAAGTTTAGTACGATGTATGAAAGGAATAGGGTTTCCTCTTTTGATGTAAATGGTAGCTTAATCTCTTCAAGTTCTAAGCCACTTCAAAGGGACACTGAGGGAGGAACTAGTAAAGAAGATGGATTGTCAGATCAGAGACTGTTTTCATGTGTCACTTGTGGAATATTGAGCTTTTCCTGTGTTGCTATTGTACAGCCTAGAGATCCGGCTGCTAGATATCTCGTGTCAGCTGATTGCAGCTTCTGTAATGATTGGGTTGTTGGTTCTGGAGTATCTAACAGTAAACTTACTACTGCCCCTGAAAAAGCAATTATTCCTGTGCCAAATATGTATACAGGCAGTTTCTCTTATGGTCCTATTGGTGTTTATTGGGGTCCAAAAGGATGGATGAAAAAAAATGTCCAAGATGGTATGCAAGATGTTTCTGTTCAATCTTCTCGGTATGCTTCAAGTATTGAAAGTGAAAAGGGCAATACAGCTCTTGCACTATTGGCTTCAGCGTATGGAAATTCTTCTGACTCTGAGGAAGATCAGATTTCAGTTGATGGTCATGAAACAAATGTGCTGACCTCTGCTTCAGAAAGTTTACTTTCTCATACTCAAGATTCCCATGCTAGTCCCGTGGCTGCACTTGATAGCGGAGATAATATTACGTTGATGAGTGCCAGTTGTGAGGGTTTAATGCATCGTAGATTTGAGGGTAATTTAAGTCATCAATCTTTAGACCACTCTTTAAAGAAACAGGATTATAATATCACATCAGGGGTTACATTTGAAAATATGAAGACAGTGCCTAATTCCACCTCAAATTGTTCCCAAGATGCCAATGACGCTGAAAGGTCATTGTCTAAAATGTCTATGGTTCCCTTTGATAATAAAAATGCTTCCATGGTGTTACAGTCTGATGAAGATTCATCCAGAATGCATGTGTTCTGTCTGGAGCATGCTGCAGAAGCAGAGAAGCAACTTCGCCCAATTGGTGGAGCCCACATATTTCTCCTATGTCATCCAGACATATTAAACTGGTTAAGAAACAAGGGGACTGTGGCTATGAAAAATGAGAGTGTAGTCATGGAAGTTATGTCAGTTTATGTGCAATGCAAGAAAAGTTCATCCCCTAATGCAAAGGTCAAGTTCAACTATCCCAAGATAGAGGCTGAAGCAAAAGTGGTGGCAGAAGATTTGGGGATTGATTACACATGGAAGAGTATTGCATACAGGCATGCTTCCAAGGAGGATGAGGAGAGGATCCAGTTGGCTCTGGATAGCGAGGAAGCCATTCCTGGGAATGGTGACTGGGCTGTAAAACTAGGAATCAATCTCTTTTATAGTGCACATCTTAGTCGCTCTCCTCTTTATAGCAAGCAGATGCCTTACAATTCTGTTATATATTGTGCATTTGGTTGTAGCTCTCCAGCTAGCTCATCCGAAGAGCCAAAGGTCTATCAAAGAAGGGTCAACAGGCAGAAAAAGGTTGTTGCTGGGAAATGGTGTGGTAAAGTTTGGATGTCCAACCAGGTCCATCCCCTTTTAGCGAAAAGAGATTCTGAAGATGCTGAGGATGAGAAAATCTTACTTGGGTGGATATCACCCGAGGAGAGAATTGAGAGATCAGAAAGTACCCCTAAAGGTGAAACTACTAGCAGAAAGTCAGGTAAGAAAAGGAAATCGACAGCAGAGAATGGACGAACCAGGAAAGGAAGTTATGCTAAGAAAAATGTAGTTTCATATAATTCCATTGAAGATAAACCCAACTCACAGCCAAGGAGTGTTCATAGAAGTAAGAAAGCCAGGAATGTTGGGAGAGATCGTGCTGCTTTGAAAGGGGATACTTCTGCATATAATCATAGAAAACCTATTAGCAAAGAAACAAACTTTACTGAAAGTGATGCGGTTTCTGATGATTCACTTGATGATGAAGATGATCACATGCAGCATGGGAGGAATTTTGACATTGACAATCATGTGGTTTCAGATGATACAGGGGACTGTGATTCTGATTGGCAGCAGAGGGAAGAACATAGCAGCAAGGACGATGAAGATATGGAGAGAGATGCAATTTCAGAGGATTCTGAAGGCAAGCATGACAAATTCATCAGTGAAGAAGATATAATTTCTGATGACCAAATGGAGAGTTGTTTTCAAAAGCGGCAAAGGAGAACTCCTAAAAGCAGGCAAGCTAAGTATCTGACTGGAAAAAGTATAATATCCAACGACCAGCTAGAGCTGAAAATGCAGAAGCAGCAACGGAGGAATCCTCAAAGCAGGCAAGCCAAATACCTCGATGAAGAGGATATTGCTTCAGATGACCAATTGGAGGGCCATTATCGTAGGTATCAAAGAAGGAATCCTAAAGGCAGGCAGGCCAAATGTGTAGTAGAGGAAGATGAAATGTCTGGTGACCAATTGGAGGATCATTGTCAGAAGCTGCAAACAAGTTTCTCTAGGAAAAAGCAAAACAAAGGCATTAATAGAGAAGATAAATATGTAATGTCTGATGACCAATTGGAGGATCATTTTCCAAAGCAGCAAAGAAGAATTCCGAAGAGCAGGCAAAACAGATACCCTGATAAAGAAGTTATGGATGACTCGGCTGAAAACAATACTCGTCTGCTGCATAGAACTCCTAAAAGAAAGCAAGCTAAATGCATGGACGAAGATGATTTGAATTCAGATGATGAAATGGAAGATGATCAGAAGCTGAGGAGAACTCTTAGAAGTAAACAATCTAAACCAAAAACACTTCAACAGATGAAACAGGCCAATTCCGTCCATGCAAAAAACCAGGCATCTCGGTCCATAAAACGGGGATCTCGGGTTCTTGTGAAATCAAAGACACCTCAGCAAATAAAACCGCGGAATAAGCAATCCACTAACTCCCGAGAGTTTAGTTTACTTGTGGAAGATGAGGAAGAAGGTGGACCTAGCACCCGCCTTAGGAAGAGAGCCACAAAAGCTCAGGGGACCGAAGGAAAATTGAAAGAGAAGCAAACAAAAAGGAAGAAGGTGAAGAATGATTCAACAGCAAAGGTTTCAGTTGGTCATGTCAAAGGAAAGGATGAGGAAGCAGATTATCAGTGTGATATGGATGGGTGCAGTATGAGTTTTGGATCAAAACAGGAGCTGCTGCATCACAAGAGAAATATCTGCCCTGTAAAAGGGTGTGGGAAGAAGTTTTTCTCACACAAGTATCTGGTGCAACACAGAAGAGTTCATGAGGACGAGAGACCCTTGAAGTGCCCTTGGAAGGGATGCAAGATGACTTTCAAGTGGGCATGGGCTCGTACTGAGCACATTCGAGTCCACACTGGTGCACGGCCTTATGTGTGTGCAGAGCCAGGTTGTGGACAAACATTCAGATTTGTGTCTGATTTCAGTCGTCATAAGCGAAAGACTGGCCATTCAGCGAAGAAGAGTCGTCAATAG
Protein Sequence
- >Vradi05g05790
MRATEKKSGIMGGGSEGSADVLPWLKSMPVAPEYRPTAAEFQDPIGYIFKIEKEASKYGICKIIPPFPPSPKKTAIANLNRSLAVSGSTFTTRQQQIGFCPRRPRPVQRPVWQSGDHYTFTEFEFKAKSFEKAYLKRHTRKGPSPGPGLTPLETETLFWKATLDKPFSVEYANDMPGSAFSPKCRHTGDPTSLADTPWNMRAVSRATGSLLRFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRVHGYGGEINPLVTFAILGEKTTVMSPEVFLSAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLRVAKDAAIRRASLNYPPMVSHFQLLYDLALALCSRIPASISAEPRSSRLKDKKKGEGETVIKELFVQDVLQNNDLLHILGKESAVVLLPRSSVDISVCSKLRVGSQQSINVSNSEGMHSSKDFVSDDLVFNRSHGIKQEKTFYSVKDKFSTMYERNRVSSFDVNGSLISSSSKPLQRDTEGGTSKEDGLSDQRLFSCVTCGILSFSCVAIVQPRDPAARYLVSADCSFCNDWVVGSGVSNSKLTTAPEKAIIPVPNMYTGSFSYGPIGVYWGPKGWMKKNVQDGMQDVSVQSSRYASSIESEKGNTALALLASAYGNSSDSEEDQISVDGHETNVLTSASESLLSHTQDSHASPVAALDSGDNITLMSASCEGLMHRRFEGNLSHQSLDHSLKKQDYNITSGVTFENMKTVPNSTSNCSQDANDAERSLSKMSMVPFDNKNASMVLQSDEDSSRMHVFCLEHAAEAEKQLRPIGGAHIFLLCHPDILNWLRNKGTVAMKNESVVMEVMSVYVQCKKSSSPNAKVKFNYPKIEAEAKVVAEDLGIDYTWKSIAYRHASKEDEERIQLALDSEEAIPGNGDWAVKLGINLFYSAHLSRSPLYSKQMPYNSVIYCAFGCSSPASSSEEPKVYQRRVNRQKKVVAGKWCGKVWMSNQVHPLLAKRDSEDAEDEKILLGWISPEERIERSESTPKGETTSRKSGKKRKSTAENGRTRKGSYAKKNVVSYNSIEDKPNSQPRSVHRSKKARNVGRDRAALKGDTSAYNHRKPISKETNFTESDAVSDDSLDDEDDHMQHGRNFDIDNHVVSDDTGDCDSDWQQREEHSSKDDEDMERDAISEDSEGKHDKFISEEDIISDDQMESCFQKRQRRTPKSRQAKYLTGKSIISNDQLELKMQKQQRRNPQSRQAKYLDEEDIASDDQLEGHYRRYQRRNPKGRQAKCVVEEDEMSGDQLEDHCQKLQTSFSRKKQNKGINREDKYVMSDDQLEDHFPKQQRRIPKSRQNRYPDKEVMDDSAENNTRLLHRTPKRKQAKCMDEDDLNSDDEMEDDQKLRRTLRSKQSKPKTLQQMKQANSVHAKNQASRSIKRGSRVLVKSKTPQQIKPRNKQSTNSREFSLLVEDEEEGGPSTRLRKRATKAQGTEGKLKEKQTKRKKVKNDSTAKVSVGHVKGKDEEADYQCDMDGCSMSFGSKQELLHHKRNICPVKGCGKKFFSHKYLVQHRRVHEDERPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHSAKKSRQ