Information report for Vradi04g06860
Gene Details
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Functional Annotation
- Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.
Homologous
- Glycine max: Glyma.18G234700, Glyma.09G257900, Glyma.07G069400, Glyma.16G035100
- Manihot esculenta: MANES_01G255300, MANES_05G032800
- Medicago truncatula: Medtr7g078090, Medtr8g030550
- Populus trichocarpa: POPTR_002G160900v3
- Prunus avium: Pav_sc0000254.1_g1560.1.mk
- Prunus persica: PRUPE_2G172900
- Vitis vinifera: VIT_15s0046g02290
Sequences
CDS Sequence
- >Vradi04g06860
ATGCAATCTGGCGGCGGCCCCGGTGGTGGGCCGGGCCGGAATCCGGCGGGACGGGCGGCATCGACGTCGTCAGCGGCTGCCTCGCCGTCTTCTTCGTCATCGGCGGCGTCACACTTGGAGTCATTGCAGCAGCAGCAACAACAACAGCAGATAGGTTCTAGGCAGTCATTTCAACAGCAGCTGCTTAGAAAACCTGAAGGGAGTGAAGCGTTTTTGGCATATCAAGCAGGTCTTCAAGGAATATTTGGGAGTAACAATTTCCCACCTAGTTCCATGCAACTGCCTCAACAGTCTCGAAAATTTGTTGATCTAGCTCAGCATGGATCCAACCAGGGTCAAGGTGTTGAGCAACAAATGCTAAATCCTGCACAAGCAGCATACTTTCAATATGCCCTGCAGGCTTCACAACAAAAGTCTGCTTTGGCAATGCAGCAACCTAAAATGGGAATGATGGGCTCTTCATCTGTAAAGGATCAGGACATGCGAATGGGAAATCTGAAAATGCAGGATCTTATGTCCATGCAGGCAGTAAATCAAGCCCAAGCATCATCGTCTAGAAATTCATCTGACCATTTTAATCATGGGGAAAAACGGGTAGAGCAAGGGCAGCAGCTAGCACCTGCTAGAAAGAGTGAAGGAAATCCTTCAAGTCAGGGACCAGCTGTTGGAAATATAGTACCTGGAAACATTATAAGACCTGTGCAAGCTCTGGCAAATCAACAGAACACCTCAAACACCATGAACAACCAGATTGCAATGTCTGCTCAATTGCGGGCTATGCAGGCATGGGCACATGAACAAAATATTGATATGTCACATCCTGCAAATGCTCAGTTAATGGCTCAGCTTATTCCATTGATGCAATCAAGGATGGTTCAACAACCGAAGGTAAATGATACTAACTCAGGTGCACAGTCATCACCTGTCCCCGTTTCAAACCAGCAGGTTACTTCTCCAGCAGTGGCAAGTGAAAGTTCAGCACGTGCTAATTCATCTGGCGATGTGTCTGCACAGTCAGGTTCTGTGAAAGGCAGGCAGATGGCTCCACCCAACCATTTGAGCCCACCAATTAGTGCTGGTATAGCCAGTACCTCTAGTGACATGACTGTGCAGCAATTCAGTCTTCATAGCAGAGACACTCAAGGATCTTTGAAGCAATCAGTTCTAACTGGAAATGGAATGCATTCACAGCAAACCTCGGCAAACATGAACATTGGTGCAGATCATCCTCTGAATGCGAAAGCATCATCATCTTGTCCAGAACCTGCAAAAATGCAGTACATCAGGCAATTAAACCAATCTGCTTCTCAGGGTGGAGGTCTGACAAATGAAGGTGGATCAGGAAATTACACCAAAACTCAAGCGGGGCCATCTCAGACACCTCAACAAAGAAATGGTTTCACCAAACAACAGCTTCATGTTCTTAAGGCACAAATACTAGCATTTCGGCGTCTGAAGAAAGGAGAAGGTGCACTTCCCCAAGAACTTCTACGGTCCATCAATCCACCACCTCTTGATTTGCAAGTGCAGCAGCCAATTCATTCTGGAGGAGCACAAAATCAAGAGAGATCGGCTGGAAATATTGTGGCTGAACAGCAAAGGCAGAATGAGGCCAATGCCAAAGATTCACAGCATATCCCATCCATTAGTGGAAATATCTCTTCAAAGAAGGAAGCCTTTATGAGAGATGAGAGCAATCCTGTAACAGCTGTTTATATGCAGGCCACGTCTCCTGTGATAAAGGAATCTGCTGGAAGGGAAGAGCAGCAGTCTGTTGTATGCTCTGCTAAGTCTGATCAGGAAAATGAACATGGAATTAACAGAACATCTGTTAGAAACGAGTTAGTATTAGACAAGGGAAAAGCTGTTGCTGCTCCCCAGTCTTCCGTAGCTGATACAGTGCAACCTAATAAACCTTCTCAGGCGAGCACTGTTGCCCAGTCAAAGGATATGGCTTCCACCGGAAAATACCATGGACCCCTATTTGATTTTCCTTTCTTCACCAGGAAACATGATTCCTTTGGGTCATCAATGATGCTCAACAACAACAACAATTTGTCTCTGGCATATGATGTGAAAGAACTTCTGTTTGAGGAAGGCATGGAGGTCATTACCAAGAGAAAGACAGAGAATTTAAGGAAGATTGAAGGTTTGCTTGCAGTAAACTTAGAGAGGAAAAGAATTAGGCCAGATCTTGTGTTAAAGTTGCAAATTGAAGGAAAAAAGCTTCGTCTTTTAGATCTTCAGGCACGTTTAAGGGACGAGATTGATCAACAACAACAAGAGATAATGGCAATGCCAGATAGGCCATATCGGAAGTTTGTTAGACTGTGTGAACGTCAGCGTATGGAACTTGCTAGACAAGTTCACGCATCTCAGAGAGCTTTAAGGGAGAAGCAACTGAAATCTATATTTCAGTGGCGCAAGAAGCTCCTTGAAACCCATTGGGCCATTCGTGATGCCCGTACTGCTCGCAACAGGGGAGTGGCTAAATATCATGAAAGGATGTTGAAAGAGTTCTCAAAACGTAAGGATGATGACAGAAATAAAAGGATGGAAGCCTTGAAAAACAATGATGTTGACAGATATAGGGAGATGTTGTTGGAGCAGCAGACTAGCATCCAAGGGGATGCTGCGGAGAGATATGCTGTCCTCTCAACTTTCTTAACCCAGACTGAAGAGTATCTCCATAAATTAGGAAGTAAGATAACAACTGCTAAGAATCAACAGGAAGTGGAGGAGGCTGCGAAAGCTGCTGCAGCTGCTGCGCGATTGCAGGCATGGTATTACAGCCTTGCTCATGCAGTGAGTGAGAAGGTTGTACGTCAACCATCAATGTTGCGGGCTGGCACACTTAGAGACTATCAGCTGGTTGGTTTGCAATGGATGCTTTCCCTGTATAACAACAAATTAAATGGAATTTTGGCAGATGAGATGGGTCTTGGAAAAACTGTGCAGGTTATGGCATTAATTGCCTATTTGATGGAGTTTAAAGGAAACTATGGCCCACATCTTATAATAGTCCCAAATGCTGTTATGGTTAACTGGAAGAGTGAGTTGTATACTTGGTTACCATCTGTGTCATGCATTTTTTATGCTGGAGGGAAGGATTACCGGTCAAAGTTATATTCACAGGAGATTATGGCTATGAAATTTAATGTCCTGGTGACTACTTATGAGTTCATCATGTATGATCGGTCGAGGCTTTCGAAAATTGACTGGAAGTATATAATAATAGATGAAGCACAGAGAATGAAGGATAGGGAATCAGTTCTAGCTCGTGATCTTGATAGATATCGTTGTCAAAGACGCCTGCTTCTGACAGGAACACCTTTACAGAATGATTTGAAAGAACTGTGGTCGCTCTTAAATTTACTTCTTCCAGAGGTTTTTGACAACAAGAAAGCCTTTAATGATTGGTTCTCAAAGCCATTTCAAAAGGAAGGTTCCAGTCAAAATACAGAAGATGATTGGCTTGAGACTGAAAAAAAAGTTATCATTATCCATCGACTTCACCAAATTCTTGAGCCTTTCATGCTCAGGCGTCGTGTTGAAGAAGTTGAGGGTTCACTACCACCAAAGGTCTCTATAGTTTTACGATGTAAGATGTCAGCTTTGCAGAGTGCCATTTATGACTGGGTCAAATCAACGGGTACCCTTCGACTTGATCCCGAGGGTGAGGAATCTAAGATTCAAAAGAATCCACTCTACCAGGCAAAAGAGTACAAGACTTTAAACAACAGATGCATGGAGTTGCGGAAAACTTGTAATCATCCATGTCTTAATTACCCATTATTTAATGAATTATCTACAAATTTAATTGTAAAATCTTGTGGGAAATTGTGGATCCTGGATAGGATCCTTATAAAGCTTCAAAGAACTGGTCATCGAGTTTTGCTGTTCAGTACCATGACAAAACTTCTAGACATATTGGAAGATTACTTGAATCTGCGAAGGTTTGTGTACAGAAGAATTGATGGGACTACTAATTTGGATGACCGTGAATCAGCTATAATGGACTTTAATAGCCCTGATTCAGACTGTTTTATCTTCTTGCTTAGCATTCGAGCTGCTGGGAGAGGCCTTAACCTTCAGTCTGCTGACACAGTTGTTATTTATGATCCTGATCCTAACCCGAAAAACGAGGAGCAGGCTGTGGCCAGAGCTCATCGTATTGGACAGAAAAGAGAAGTCAGAGTTATCTACATGGAGGCTGTTGTTGACAAAATCTCTAGCCATCAGAAGGAGGATGAACTGAGAAGTGGAGGCACGGTCGATATGGAGGATGAATTTGTGGGTAAGGACCGCTATATAGGATCAGTTGAGAGCCTCATAAGGAACAATATTCAACAATACAAGATAGATATGGCTGATGAGGTTATCAATGCTGGACGTTTTGATCAAAGGACAACACATGAAGAGAGGCGTTTGACTTTAGAGACATTGTTACATGATGAAGAAAGGTATCAAGAAAATGTCCACAATGTTCCTTCTCTTCAGGAGGTAAATCGCATGATTGCCAGGAGTGATGAGGAAGTGGAGTTGTTTGATCAAATGGATGAAGAACTGGATTGGCCTGAGGAGATGATGCAACATGATGAGGTGCCACAGTGGCTTCGAGCCAATACAAGAGAAGTGAATGCTGCTATTGCTTCTTTGTCTAAAAGACCATCAAAGAACATTTTATTGGGTGGTAGTGTTGGCATGGACAGTGAGGTGGGTTCTGAAAGGAGAAGGGGACGGCCCAAGGGGAAAAAACATCCTAATTATAAAGAGTTGGAAGATGAAAACGGAGAATATTCTGAAGCAAGTTCTGAAGACAGAAATGAGTATTCTGCACAAGAAGAAGGGGAAATTGGAGAGTTTGAAGATGATGTTTATAGTGGGGCTGATGGACATCAATTGGAAGAGGATGGTTTAACTTCTGATGCTGGATATGAAATTGCTCGTTCTTCAGAAAATGCTAGACATAATCATGTGGCTGAAGAGGCTGGTTCCTCAGGATCATCCTCTGACAATCAAAGATTGGTGCAAACAGTTTCACCTTCAGTTTCTGCTCAGAAATTTGGTTCTCTCTCCGCATTGGATGCCAGGCCAAGCTCCATTTCAAAAATTATGGGAGACGACTTGGAAGAAGGGGAAATTGCAGTATCGGGTGATTCTCACATGGATCATCAACAATCAGGAAGTTGGATTCATGATCGAGACGAGGGGGAAGATGAACAAGTTTTACAGAAACCCAAGATTAAGCGCAAGCGTAGTCTTCGTGTTCGTCCCCGCCAAGCTGTGGAAAGGCTTGAGGACAAGTCTGGCAGTGAGATGAAATCTCTTCAACGGGGAGAATCATCTCTTTTGGTAGACTATAAATATAAAATGCAAACAAGGATTGATACGGAATCAAAATCATTTATAGACAACAATGCCGGCAAGCATGATAAGAATGCAACAACATTAAAAAACAAGCAAAAGTTACCTTCAAGGAAAGTAGCTAATACGTCCAAATTACATGGGTCACCTCAGTCTAATCGTTTGAATTGCTCATCTGGTCCTTCTGATGATGGTGGTGAACACCCTAGAGAAAGTTGGGAGGGGAAGCCTCTAAATTCAAATGGATCTTCAGTTCATGGCACTAAGACGACTGAGATAATCCAAAGAGGATGCAAGAATGTAATTAGCAAGCTCCAAAGGAAAATAGACAAGGAAGGCCATCAGATTGTACCTTTGCTAACAGATTTATGGAAGAGGATTGAGAATTCAGGGTATGCGGGTGGATCTGGGAGTAGTCTGTTGGATTTACGGAAGATTGACCAGCGGATTGATAGAATGGATTATACCGGAGTAATGGAGCTCGTGTTTGATGTACAGTTCATGTTGAGGGGTTCAATGCATTTCTACGGATATTCATATGAGGTGAGATCTGAAGCAAGGAAGGTTCATGATCTATTCTTTGATATCCTGAAAATTGCGTTCCCGGATACAGATTTTGGAGAAGCAAGATGTGCAATTTCTTTCTCCAGCCAAATTCCTGCGGGTACCACCACATCTCCAAGGCAAGTGACAGTTGGCCCCAGCAAAAGGCACAGAGCGACCAATGATGTGGAAACCAATCCAATCCCTTCACAGAAGCTGCCACAAAGCGGAGCTGCTTCTAATGGCGAAAGCAGCAGGTTCAAAGGTTCAAAAACTGGTAGTGGCAGCAGCAGTGCACGTGAGCAACCTCAGCAGGATAATCATCCAATGCTCACCCATCCAGGTCAGTTGGTTGTGTGCAAGAAGAAAAGAAATGACAGAGAAAAGACATTGGGGAAGGGAAGGAGTGGATCAGCATGTCCTGTTTCTCCACCTTGTGCTATAAGAAGTCCAGGGTCAGGTTCAAACCCAAAGGATGGTAGATGGGGTAGTCAACCATCTCAACACTCAAATGGGTCTGCTGGGTCAGTTGGTTGGGCAAACCCTGTAAAGCGTTTGAGAACAGATTCTGGGAAGAGGAGACCAAGCCATATGTAG
Protein Sequence
- >Vradi04g06860
MQSGGGPGGGPGRNPAGRAASTSSAAASPSSSSSAASHLESLQQQQQQQQIGSRQSFQQQLLRKPEGSEAFLAYQAGLQGIFGSNNFPPSSMQLPQQSRKFVDLAQHGSNQGQGVEQQMLNPAQAAYFQYALQASQQKSALAMQQPKMGMMGSSSVKDQDMRMGNLKMQDLMSMQAVNQAQASSSRNSSDHFNHGEKRVEQGQQLAPARKSEGNPSSQGPAVGNIVPGNIIRPVQALANQQNTSNTMNNQIAMSAQLRAMQAWAHEQNIDMSHPANAQLMAQLIPLMQSRMVQQPKVNDTNSGAQSSPVPVSNQQVTSPAVASESSARANSSGDVSAQSGSVKGRQMAPPNHLSPPISAGIASTSSDMTVQQFSLHSRDTQGSLKQSVLTGNGMHSQQTSANMNIGADHPLNAKASSSCPEPAKMQYIRQLNQSASQGGGLTNEGGSGNYTKTQAGPSQTPQQRNGFTKQQLHVLKAQILAFRRLKKGEGALPQELLRSINPPPLDLQVQQPIHSGGAQNQERSAGNIVAEQQRQNEANAKDSQHIPSISGNISSKKEAFMRDESNPVTAVYMQATSPVIKESAGREEQQSVVCSAKSDQENEHGINRTSVRNELVLDKGKAVAAPQSSVADTVQPNKPSQASTVAQSKDMASTGKYHGPLFDFPFFTRKHDSFGSSMMLNNNNNLSLAYDVKELLFEEGMEVITKRKTENLRKIEGLLAVNLERKRIRPDLVLKLQIEGKKLRLLDLQARLRDEIDQQQQEIMAMPDRPYRKFVRLCERQRMELARQVHASQRALREKQLKSIFQWRKKLLETHWAIRDARTARNRGVAKYHERMLKEFSKRKDDDRNKRMEALKNNDVDRYREMLLEQQTSIQGDAAERYAVLSTFLTQTEEYLHKLGSKITTAKNQQEVEEAAKAAAAAARLQAWYYSLAHAVSEKVVRQPSMLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVMVNWKSELYTWLPSVSCIFYAGGKDYRSKLYSQEIMAMKFNVLVTTYEFIMYDRSRLSKIDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNKKAFNDWFSKPFQKEGSSQNTEDDWLETEKKVIIIHRLHQILEPFMLRRRVEEVEGSLPPKVSIVLRCKMSALQSAIYDWVKSTGTLRLDPEGEESKIQKNPLYQAKEYKTLNNRCMELRKTCNHPCLNYPLFNELSTNLIVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEDYLNLRRFVYRRIDGTTNLDDRESAIMDFNSPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVRVIYMEAVVDKISSHQKEDELRSGGTVDMEDEFVGKDRYIGSVESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQENVHNVPSLQEVNRMIARSDEEVELFDQMDEELDWPEEMMQHDEVPQWLRANTREVNAAIASLSKRPSKNILLGGSVGMDSEVGSERRRGRPKGKKHPNYKELEDENGEYSEASSEDRNEYSAQEEGEIGEFEDDVYSGADGHQLEEDGLTSDAGYEIARSSENARHNHVAEEAGSSGSSSDNQRLVQTVSPSVSAQKFGSLSALDARPSSISKIMGDDLEEGEIAVSGDSHMDHQQSGSWIHDRDEGEDEQVLQKPKIKRKRSLRVRPRQAVERLEDKSGSEMKSLQRGESSLLVDYKYKMQTRIDTESKSFIDNNAGKHDKNATTLKNKQKLPSRKVANTSKLHGSPQSNRLNCSSGPSDDGGEHPRESWEGKPLNSNGSSVHGTKTTEIIQRGCKNVISKLQRKIDKEGHQIVPLLTDLWKRIENSGYAGGSGSSLLDLRKIDQRIDRMDYTGVMELVFDVQFMLRGSMHFYGYSYEVRSEARKVHDLFFDILKIAFPDTDFGEARCAISFSSQIPAGTTTSPRQVTVGPSKRHRATNDVETNPIPSQKLPQSGAASNGESSRFKGSKTGSGSSSAREQPQQDNHPMLTHPGQLVVCKKKRNDREKTLGKGRSGSACPVSPPCAIRSPGSGSNPKDGRWGSQPSQHSNGSAGSVGWANPVKRLRTDSGKRRPSHM