Information report for Vradi0315s00020
Gene Details
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Functional Annotation
- Encodes PCFS4 (Pcf11p-similar protein 4), a homolog of yeast polyadenylation factor Protein 1 of Cleavage Factor (Pcf11p). Regulates FCA (AT4G16280) mRNA polyadenylation. Promotes flowering time.
Homologous
- Actinidia chinensis: CEY00_Acc17446, CEY00_Acc09621
- Citrullus lanatus: Cla97C03G053860
- Cucumis melo: MELO3C004944
- Cucumis sativus: CsGy1G013510
- Glycine max: Glyma.20G142500, Glyma.10G251100
- Juglans regia: Jr04_14500, Jr04_14430, Jr04_14450, Jr04_14490, Jr04_14440
- Populus trichocarpa: POPTR_004G020300v3, POPTR_011G024800v3
- Prunus persica: PRUPE_4G024700
- Rosa chinensis: RchiOBHm_Chr5g0003821
- Solanum tuberosum: PGSC0003DMG400029413
Gene Resources
- Pfam: PF04818
- UniProt: A0A1S3W124
- RefSeq: XP_014524182.1
- AlphaFoldDB: A0A1S3W124
- KEGG: vra:106780408
- InterPro: IPR006569 , IPR008942 , IPR013087 , IPR045154 , IPR047415
- PANTHER: PTHR15921 , PTHR15921:SF12
- SUPFAM: SSF48464
- PROSITE: PS00028 , PS51391
- Gene3D: 1.25.40.90
- OrthoDB: A0A1S3W124
- SMR: A0A1S3W124
- CDD: cd16982
- STRING: 3916.A0A1S3W124
Sequences
CDS Sequence
- >Vradi0315s00020
ATGTTCTCCCAAAATCTGATTCTCCCTCCCGAAAACCCTAGACCAGCGGCCTCGTTCGCTTCAAAACCCATGAGCAATGAGATCGCAATCGCTGCGCAGAAACCTCCTCCGTCGATTCTCGTTGGCCGTTTCAAGGCACTCCTCAAGCAGCGTGATGACGAACTCAGACTCGTCGCAGGCGTCCCCGTTCCGCCCCCGACAACAGATGAAATCGTCCAGATTTACGACCTCCTTTTGTCGGAACTCACCTGTAATTTGAAGCCTATCATCACCGATCTCACAATCATCGCCGAACAGCAGAGGGAGCACGCCAAAGGCATCGCTGATGCAATTTGCGCTCGGATTCTCGAGGTGCCAGCAGATCAAAAGCTCCCCTCACTCTATTTGTTGGACAGTATTGTGAAGAATTTTGGGCAGGAATACATTAAATACTTCTCTTTACGTCTGCCAGAAGTTTTTTGTGAGGCATACAGGCAGGTTCAGCCTAGTTTGCATCCTGCTATGCGGCATCTTTTTGGGACATGGTCAAAAGTTTTTCCCCCTTCTGTCCTACGCAAGATTGAAGCTGAATTGCAATTTTCCGTAGCAGTTAATACCCAATCATCCACCCTGAATGCCGTAAGGGCTTCTGAATCTCCGCGGCCTAGTCATGGCATACATGTTAATCCAAAATACCTGCGCCAATTGGATCCCTCAACCGTGGATAGTGTTGGTGCTGAAAAGTTGGATTCATCAGGAAATGCCAATAATACAAACTTTGGCATTCTAGGTAGTAAGACACACCAAATTTTATCAGGCAGTGGCAGGCTGGGAATATCCTCTTCCCCTTCAAGAAGTGGACTTGATAGGCCTTTGTCTGCACCCATGGATGAGTATGCAGCTGACAGTTCTGCTAACAGATTAATTGAGAGAGACTCTTCTCATCCTGCTGTTGATTATGGAGTAGGCAAGGCAATAGGTAGAGATATGGAGTTGAGTGAATGGCAACGAAAGCAGTATGCTGGTGATGGTCGTAATAGGTTTCCAACTTCTATCACATACAGCCTTAGTAATGGACATCAGCGTCAAAGTCCCAGAGCTTTAATCGATGCATATGGCAGTGACAAAAGTCAAGAAACTTCAAGTACTAAGCCTTTGCTAGTAGAACGGCTTGATAGAAATGGTATAGACAACAAGGTATTGCCTACATCATGGCAGAATACTGAAGAAGAGGAATTTGATTGGGAAGATATGAGTCCAACCTTAACTGATCATAGTAGAAATAACAGTATATTGCCTTCAACTATTGGATTCACCAGGGAAAGGCCTGTTGTTGCAGCTAATGCCGCTTTGTCAGAGCATGATTCCAGGAAGGGGGTTTGGTCTAGTGGATCTCAGCTTCCTCCAGTGGATGATTCTTCTGCTATAGCAGAAGATGCATTTTCTTCTTTGGGTTTTCGACGACAATCCCTGGGACAGATACCTGGATTCCAAAATCATATCAATCATAGTCTGGGTTCTTCTCATCATCTGTCCAACTCGTCACAACATATCTTTGGTAATAGGGGCAGGGCAAGAACTCTTACATTTCCTCCTATTGATAACATTCACAATGCCGATACAAATCCATATCGGGTTCGACCTACAGTATCAAGGATGGTTTCTGGCCGTGTCTCTAATGTGGAACCTAGACCATCAGTTTTGCCTGCAACTCTTGAAATAAGGCCTTCTGTAAATTTGAATGTCACTCGACCACCTGCATTAAATCCAATAACTCCATTACAAAAACATGTTAGGAGTCAGTTTGAAGCTTTACATACTAGTAACCCTATTGTGAATCATGTAAATAAATCTTCATTTATGCCAGAGCAGTCATTTGACAGTGTTGAGAACAAGGATGCAAGTATTTTGAAGATACATCAGTTGCCTAATCAGCTTCCTGGACTAATTTCGTCCAACCAGCAAAATCACAGGCAAGCACCACAACTGCAGTTTTTCCCACCATCTCAGGATTCGTCAAACTCACAATTTAGTCATGGGAGTTCTTTGCAGGGACATGGTGCTTCTATAAGTACTGCCATGTCGAATCCATTACCTATTATGCAATTCCATTTGCCACTGCAAAATGTTGCAAATAACCCTTTACATTTACAGGGTGGAGCCCGTCCACCTTTACCTCCAGGTCGCCCTCCTGCCCCACCACAAATGATACCTCTTCCAAATGCCAGTCCATTTATGTCAAGCCAACAGCCAACTGTTGGATATACTAATTTAATTAGTTCTCTAATGTCTCAAGGTGTGATCTCATTGGCCAACCAGCTGCCTGCACAGGATTCTGTTGGAACTGAGTTCAATCCAGATATTCTGAAGCTTCGTTATGAGTCTGCTATCAATGCCTTGTATGGTGATCTCCCAAGACAATGCACAACTTGTGGACTCCGATTCAGATGCCAAGAGGAACACAGTAGTCATATGGATTGGCATGTGACAAAGAATCGGATGTCTAAAAGCCGGAAGCAGAAACCCTCTCGGAAGTGGTTTGTGAGTGACAGGATGTGGCTTAGTGGTGCAGAGGCATTGGGAACCGAGTCAGTTCCAGGTTTTTTGCCTACGGAAACCATAGAAGAAAAGATAGATGATGAAGAGTTGGCTGTTCCAGCAGAAGAGGATCAAAATACTTGTGCATTATGTGGAGAGCCTTTCGATGAGTTTTACAGTGATGAAATGGAGGAATGGATGTATAGGGGAGCTGTATACCTCTATGCTCCCACGGGGACAACAGCAGGCATGGACAGGTCACAGTTAGGCCCCATAATTCATGCTAAGTGCAGATCAGAATCTAATATGGCACCATCTGAAGATCTTGGGCCGGATGAAAAGGGTGGTGATGAAGAGGGTACCCAAAGGAAGCGAAGGCGTAGTTGA
Protein Sequence
- >Vradi0315s00020
MFSQNLILPPENPRPAASFASKPMSNEIAIAAQKPPPSILVGRFKALLKQRDDELRLVAGVPVPPPTTDEIVQIYDLLLSELTCNLKPIITDLTIIAEQQREHAKGIADAICARILEVPADQKLPSLYLLDSIVKNFGQEYIKYFSLRLPEVFCEAYRQVQPSLHPAMRHLFGTWSKVFPPSVLRKIEAELQFSVAVNTQSSTLNAVRASESPRPSHGIHVNPKYLRQLDPSTVDSVGAEKLDSSGNANNTNFGILGSKTHQILSGSGRLGISSSPSRSGLDRPLSAPMDEYAADSSANRLIERDSSHPAVDYGVGKAIGRDMELSEWQRKQYAGDGRNRFPTSITYSLSNGHQRQSPRALIDAYGSDKSQETSSTKPLLVERLDRNGIDNKVLPTSWQNTEEEEFDWEDMSPTLTDHSRNNSILPSTIGFTRERPVVAANAALSEHDSRKGVWSSGSQLPPVDDSSAIAEDAFSSLGFRRQSLGQIPGFQNHINHSLGSSHHLSNSSQHIFGNRGRARTLTFPPIDNIHNADTNPYRVRPTVSRMVSGRVSNVEPRPSVLPATLEIRPSVNLNVTRPPALNPITPLQKHVRSQFEALHTSNPIVNHVNKSSFMPEQSFDSVENKDASILKIHQLPNQLPGLISSNQQNHRQAPQLQFFPPSQDSSNSQFSHGSSLQGHGASISTAMSNPLPIMQFHLPLQNVANNPLHLQGGARPPLPPGRPPAPPQMIPLPNASPFMSSQQPTVGYTNLISSLMSQGVISLANQLPAQDSVGTEFNPDILKLRYESAINALYGDLPRQCTTCGLRFRCQEEHSSHMDWHVTKNRMSKSRKQKPSRKWFVSDRMWLSGAEALGTESVPGFLPTETIEEKIDDEELAVPAEEDQNTCALCGEPFDEFYSDEMEEWMYRGAVYLYAPTGTTAGMDRSQLGPIIHAKCRSESNMAPSEDLGPDEKGGDEEGTQRKRRRS