Information report for Vradi0154s00080
Gene Details
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Functional Annotation
- Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family. Functions as a positive regulator of DNA homologous recombination (HR). In INO80 mutants, the HR frequency is reduced to 15% of that in the wild-type. Mutation in INO80 does not affect sensitivity to genotoxic agents and efficiency of T-DNA integration. INO80 was also shown to regulate a subset of the Arabidopsis transcriptome.
Homologous
- Glycine max: Glyma.19G136000, Glyma.03G133700, Glyma.10G106500
- Gossypium hirsutum: Gohir.D09G117100, Gohir.A09G121000
- Juglans regia: Jr03_04990, Jr04_18550, Jr03_05000
- Manihot esculenta: MANES_09G018100
- Medicago truncatula: Medtr7g090960
- Populus trichocarpa: POPTR_016G043500v3, POPTR_006G047100v3
- Prunus avium: Pav_sc0000096.1_g280.1.mk
- Prunus persica: PRUPE_7G053300
- Vitis vinifera: VIT_08s0007g09020
Sequences
CDS Sequence
- >Vradi0154s00080
ATGGATCACCGACCGAAATCGAAGGATTCACTCCCTTACTCCACTCTTTTCAATCTCGAGTCTTTGGTGAACTTTCAACTTCCACAACACGATGATGATTTTGATTATTATGGGAATAGTAGTCAGGATGAGAGCAGAGGCAGCCAAGGTGGGGGGATTACAAATCATAGTAATGGGAATGTGCATGGAAGGGAGGCGAGTTTGTTGAAGAAGAGGAGGTGGTCTCTGAACCGTGACAGTGAGGATAGGAGCGGTTTTTATGAGACACACATGACAGAGGAGCGATATCGATCAATGTTGGGAGAGCATATTCAGAAATACAAGAGGAGGTTAAAGGATACAATAAGTAGTCCTGCCCAAAATCAAGCTACTGTTGCACCTGGGAAAAGCAGCACAGGGTTGAAAGCTCGGAAGTCAGGGAATGAGCGCAGGGGAGGATTACATGCTGTGGAGACTACGTCAGAATGGATGAATGATTCGAGCTCCCAGAAACCAGGAAACTACCGTGAAGCAGATTTCACCCCACAATATGGCACTGCTGATAGGATTATGTATGAACCTGCATCTTTGGATATCGGGGATGGAATCATTTACAAGATTCCTCCAATCTATGATAAGTTGGCAGGAGCTCTGAACCTCCCAAGCTTCTCGGATATCCATGTTGATGATTTTTACTTAAAGGGCACCTTGGATTTGGGTTCATTGGCTGAGATGATGGCAGCTGATAAAAGATTTGGGAATAGAAACCGAGCTGGCATGGGTGAAGCATTAACGCAATATGAATCACTACAGGCACGGCTGAAGGTCATGGGAGCTTCAAATTCTGCTCATAAATTCAGTCTGAAAGTGTCTGATGCTGATTTGAATTCCTCCATTCCAGAGGGGGCAGCGGGAAGCATAAGGCGATCTATTTTGTCCGAGGGTGGTGTATTGCAGGTTTATTATGTGAAAGTTTTGGAGAAAGGTGACACCTATGAGATCATTGAAAGAAGCCTACCTAAGAAACAAAAAGTGAAAAAAGATCCTGCCTTGATCGAGAAGGAGGAAACAGAACGATGTGGTAAGATTTGGGTAAATATTGTCAGAAGGGACATACCAAAGCATCATAGGAACTTCACTACTTTTCATCGAAAGCAGCTTATTGATGCCAAGAGAGTCTCAGAGATTTGTCAAAGAGAGGTTAGAATGAAAGTTAGTAGATCCCTTAAATGGACAAGGGCTGCTGGAATGCGCACCCGGAAACTAGCTAGGGACATGTTGCTGTTCTGGAAACGAATAGATAAAGAGATGGCAGAAGTGAGGAAGAGGGAGGAAAAAGAAGCTGCAGAAGCTTTGAGGCGCGAACAGGAGCTTCGAGAGGCGAAGAGGCAACAACAAAGGCTTAATTTTCTTATACAACAAACTGAGCTGTACAGTCACTTTATGCAGAACAAGTCAAACTTGCTATCTTCAGAAACTTTACCCACTGTAGATGAAGATGCAAATGACCAAGATGCAATGATTGATGACTCTTCAGATGCTAAGCCTGATGACGAGGAAGATCCTGAAGAGGCTGAATTGAAGAAGGAAGCTTTGAAGGCTGCACAAGAAGCAGTTTTTAAGCAGAGAAGTTTGACAAGTGCTTTTGACACTGAATGCTTGAGGCTGCGCCAAGCTGGTGAAACAGATTCACTTCCACCAGATGTTGCTGGAGCGAGTAATATTGATTTGCAAACCCCCTCCACCATGCCAGTGGCATCCACAGTTCGGACACCTGAATTATTTAAAGGGGTTCTTAAAGAATATCAGCTAAAGGGTCTTCAGTGGCTTGTAAACTGTTATGAGCAGGGTTTAAATGGTATTCTAGCAGATGAAATGGGACTTGGAAAGACTATTCAGGCCATGGCATTCTTGGCTCATTTAGCTGAGGAAAAAAACATATGGGGACCTTTTCTGGTTGTTGCACCTGCTTCAGTATTAAATAATTGGAATGAGGAACTTGAGCGCTTCTGCCCGGAACTGAAAAGACTTCCATACTGGGGCGGACTTTCAGAACGGACAGTACTTAGGAAAAGTATTAACCCAAAGGATCTATACCGTAGGGAAGCTAAATTTCACATTCTCATCACAAGCTACCAGCTATTAGTATCTGATGAGAAGTATTTTCGTCGAGTGAAATGGCAGTATATGGTTTTAGATGAAGCCCAGGCTATCAAAAGTTCGACAAGTATAAGATGGAAGACACTTCTCAGTTTTAATTGTCGGAATCGCCTACTGCTGACTGGTACACCCATTCAGAATAACATGGCTGAGTTATGGGCTCTTCTTCACTTCATCATGCCAACTTTATTTGACAGCCATGAGCAGTTTAATGAGTGGTTTTCTAAAGGAATTGAGAACCATGCGGAACATGGAGGTACTTTGAATGAGCATCAGCTTAATCGATTGCATTCAATTCTAAAGCCTTTCATGCTGCGGCGTGTTAAAAAGGATGTGGTTTCTGAGCTGACTAGAAAAACTGAGGTTACTGTGCACTGTAAGCTCAGTTCTCGGCAACAGGCTTTTTATCAAGCAATTAAGAACAAGATCTCTCTTGCCGAATTGTTTGACAGTAATCGTGGGCAGCTCAATGAGAAGAGAATTCTGAATTTAATGAACATTGTTATTCAACTAAGGAAGGTTTGCAACCATCCTGAGTTGTTTGAAAGGAGTGAGGGAAGCACATACCTCTACTTTGCAGAGATTCCGAATTCCCTTCCACCTCCTCCATTCGGGGAATTGGAGGATATTTATTATTCTGGTGGTCACAACCCCATATCATATGAGATGCCAAAACTTGTCTATGAAGAAATTGTACAAAGTTCAGAGATTTTTGGATCATCTGTTGGTCGTGGTGTCTCCAGAGAATCTTTTCAGAAACATTTTAGTATTTTTAGACCAGAAAACGTTTTTCGATCTGTATTCTCAGAAGACACGTATAGTACAAGTGGAAACCTAGGTTTTACCCATTTGATGGATTTGTCTCCACAAGAGGTGATGTTTCTGGCTACTGCTTCTTTTGTGGAGCGACTATTATTTTCTATTACGAGATGGGAACGTAAATTCATTGATGAAGCTGTAGACTTTCTAACTGAGACCATAGATGATGACCCAGAATGTAGTTACCTTGAGAAAGAAAAAGTCAGAGCAGTTACAAGGATGTTATTGGTGCCAACGAGATCCGAGGCTCAGTTTCTGCAGGAAAGATTGCAGACTGGACCCAGCCATGCTCCTTTTGAGGCCTTGATTGTCCCACATGAAGATAGGCTGTTATCAAACGCCAGGCTTGTTCACTCTGCTTACACATATATCCCACAAAGTAGAGCTCCTCCTATTGGTCTTCACTGCTCAAATAGGAACTTCTACTATAAAATGATTGAAGAATTACATGATCCCACGGTTAAGAGGTTATTTGTGGGATTTGCACGTACATCTGATTATAATGGACCTAGAAAGCCAGATGCTCCTCACCATTTAATTCAAGAGATAGATTCTGAATTACCTGTTTCTCACCCTGCGCTTCAGTTAACACATAGCATTTTTGGAACTTCTCCACCAATGCGCAATTTTGACCCTTCGAAGTTGCTCACTGACTCCGGAAAACTCCAAACACTTGATATATTATTAAAACGGTTAAGAGCAGGAAATCATCGTGTACTCTTGTTTGCTCAGATGACCAAAATGTTGAATATTTTGGAGGTACTTTCAACATTTCATGATGTCCAACGTATTGATATTGATTGTATCAACTTGACGGCTGCTGACACAGTCATATTTTATGAGAGTGATTGGAATCCAACATTGGATCTACAGGCAATGGACAGAGCTCATCGTTTGGGCCAGACAAAAGATGTTAGTTCCACCTATCACCAACTTCTCCCTCAAACTACTTGTTCTATGGATGTTAACGTTACTGTTTACCGACTTATATGTAAAGAGACAGTTGAAGAGAAGATTCTTCTTAGAGCGAGTCAGAAAAGTACTGTGCAGAACCTTGTCATGACTGGTGGATCTGTCGGTGGTGATCTCTTAGCGCCTGAGGATGTTGTATCTTTGCTTCTAGATGATGCTCAGTTGGAGCAGAAGTTAAAGGAGATCCCTCTCCAGGTAAAGGATAAGCAAAAGAAAAAACAACCTATGAAAGGCATTAGGGTAAATGAAGATGGTGATGCATCACTGGAAGATCTAACAAGCTCTGCAGCTCAGGGTACTTCAGATTATGATGCTGCCGTGGATCCAGAGGGTTCAAAGTCTAGTAATAAAAAGAGAAAAGCTGCCTCGGATAAGCCGAGGCCAAAGAATTCTCAAAAGATGAGTGAATTTAGTACTGCATTCATGGACAGCGAATTGGATGATGTCGATCCAGTGGGTCAGAAACCCAAGAGACCGAAGAGGGTAAAGAAGAATGTGAACGTTGAAGATACTTTTACTGGGACTGCTATCACTGTTCCAGAGCAGAGCCAATTTCCACCTCCACGTGATTTTAGTGCCGGTGGTTCTAAAGCAGAATCAGGGCAAGACAACTAA
Protein Sequence
- >Vradi0154s00080
MDHRPKSKDSLPYSTLFNLESLVNFQLPQHDDDFDYYGNSSQDESRGSQGGGITNHSNGNVHGREASLLKKRRWSLNRDSEDRSGFYETHMTEERYRSMLGEHIQKYKRRLKDTISSPAQNQATVAPGKSSTGLKARKSGNERRGGLHAVETTSEWMNDSSSQKPGNYREADFTPQYGTADRIMYEPASLDIGDGIIYKIPPIYDKLAGALNLPSFSDIHVDDFYLKGTLDLGSLAEMMAADKRFGNRNRAGMGEALTQYESLQARLKVMGASNSAHKFSLKVSDADLNSSIPEGAAGSIRRSILSEGGVLQVYYVKVLEKGDTYEIIERSLPKKQKVKKDPALIEKEETERCGKIWVNIVRRDIPKHHRNFTTFHRKQLIDAKRVSEICQREVRMKVSRSLKWTRAAGMRTRKLARDMLLFWKRIDKEMAEVRKREEKEAAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQNKSNLLSSETLPTVDEDANDQDAMIDDSSDAKPDDEEDPEEAELKKEALKAAQEAVFKQRSLTSAFDTECLRLRQAGETDSLPPDVAGASNIDLQTPSTMPVASTVRTPELFKGVLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWNEELERFCPELKRLPYWGGLSERTVLRKSINPKDLYRREAKFHILITSYQLLVSDEKYFRRVKWQYMVLDEAQAIKSSTSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIENHAEHGGTLNEHQLNRLHSILKPFMLRRVKKDVVSELTRKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGQLNEKRILNLMNIVIQLRKVCNHPELFERSEGSTYLYFAEIPNSLPPPPFGELEDIYYSGGHNPISYEMPKLVYEEIVQSSEIFGSSVGRGVSRESFQKHFSIFRPENVFRSVFSEDTYSTSGNLGFTHLMDLSPQEVMFLATASFVERLLFSITRWERKFIDEAVDFLTETIDDDPECSYLEKEKVRAVTRMLLVPTRSEAQFLQERLQTGPSHAPFEALIVPHEDRLLSNARLVHSAYTYIPQSRAPPIGLHCSNRNFYYKMIEELHDPTVKRLFVGFARTSDYNGPRKPDAPHHLIQEIDSELPVSHPALQLTHSIFGTSPPMRNFDPSKLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEVLSTFHDVQRIDIDCINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVSSTYHQLLPQTTCSMDVNVTVYRLICKETVEEKILLRASQKSTVQNLVMTGGSVGGDLLAPEDVVSLLLDDAQLEQKLKEIPLQVKDKQKKKQPMKGIRVNEDGDASLEDLTSSAAQGTSDYDAAVDPEGSKSSNKKRKAASDKPRPKNSQKMSEFSTAFMDSELDDVDPVGQKPKRPKRVKKNVNVEDTFTGTAITVPEQSQFPPPRDFSAGGSKAESGQDN