Information report for VIT_19s0085g01090
Gene Details
|
|
Functional Annotation
- Encodes a 237-kDA protein with similarity to vertebrate Tpr, a long coiled-coil proteins of nuclear pore inner basket filaments. It is localized to the inner surface of the nuclear envelope and is a component of the nuclear pore-associated steps of sumoylation and mRNA export in plants. Mutations affect flowering time regulation and other developmental processes. Probably acts in the same pathway as ESD4 in affecting flowering time, vegetative and inflorescence development.
Homologous
- Arabidopsis thaliana — AT1G79280
Gene Resources
- Pfam: PF07926
- UniProt: D7T103
- EMBL: FN595503
- KEGG: vvi:100251875
- OMA: HAQQNYE
- InterPro: IPR012929
- PANTHER: PTHR18898 , PTHR18898:SF2
- OrthoDB: D7T103
- eggNOG: KOG4674
- STRING: 29760.D7T103
- HOGENOM: CLU_001545_0_0_1
Sequences
CDS Sequence
- >VIT_19s0085g01090
ATGCCGCTCTTCATTTCCGACGAAGAGTACTCCCGGTGCTCAAACGACGTCGCTTTGGTCGCCGAGAAGGCGGATTCCTTCATCAGAGACCTCTACAACGAGCTCCAGACCGTCAAAGCTCAGGCCGATGCCGCCTCCATCACCGCCGAGCAGACTTGCTCTCTTCTTGAGCAGAAGTACATCTCTCTCTCCCAAGAATTCTCCAAACTCGAATCTCAAAACGCCCAACTCAACTCCTCTCTTCAAGAACGACTCTCAGAGCTCGCCCAAATCCAAGCTGAAAAGCACCAGCTCCACCTCAAATCCATTGAGAAAGATGGAGAGATTGAGCGGTTGTCTACTGAGGAGTCGGAGCTTCATAAATCGAAAAGGCAGTTGCTTGAGTTTTTGGAGCACAAGGATTTGGAGATTAGTGAGAAAAATGCTACAATCAAAAGTTACTTGGATAAGATTGTTAACATGACAGACACTGCTGCTCTAAGGGAGGCTCGACTGAGTGATGCCGAGGCAGAGTTGTCACGTTCTAAGGCTGCATGTGCACGTCTTTTACAGGAGAAAGAACTTATTGAAAGGCATAATGTTTGGCTTAATGACGAGTTAACATCTAAAGTTAAGAGTCTCACTGAGCTACGAAGAACACATGTTGAACTTGAGGCAGACATGTCTACTAAGCATTCAGATGTTGAGAGACGATTGAATGAATGCTCTAGCTCTTTGAAATGGAATAAAGAAAGAGTGAAAGAGCTAGAAATGAAGTTGACATCAATGCAACAGGAGTTGTGCTCATCAAAAGATGCTGCTGCAGCCAATGAACAGAGGCTTTCTGCTGAAATCATGACTGTAAACAAACTTGTTGAACTGTACAAAGAGAGTTCAGAGGAATGGTCCAGAAAGGCAGGAGAGCTTGAGGGTGTGATCAAAGCTTTGGAAACACATTTGATTCAAGTTGAAAATGACTATAAAGAGAGACTTGAAAAGGAAGTATTTGCCAGAAAGGAACTCGAAAAGGAGGCAGCAGATTTGAAAGGGAAACTCGAAAAGTGTGAGGCTGAGATGGAAACTAGTAGAAGAGCAAATGAGCTAAATCTTCTTCCACTCAGCAGTTTAATTACTGGAACCACATGGTTGGATTCTTTTCAAACCAATGACATGGTTGAAGATAACTGCATGCTTGTCCCCAAGATTCCAGCGGGTGTTTCAGGGACTGCATTAGCAGCTTCGCTTCTGCGCGATGGCTGGAGTCTGGCTAAGATGTATAGCAAATATCAAGAGGCTGTTGATGCCTTGCGACATGAGCAATTAGGAAGGAAGCACTCTGAAGCAATGTTGGAACAGGTCCTGCATGAAATAGAGGAGAAAGCTGTAGTCATTTTGGATGAGAGAGCGGAACATGAGAGAATGGTTGAAGGATACTCTGCAATCAACCAAAAACTGCAGCAATCTCTTTCTGAGCAGTCGAATTTGGACAAAACAATCCAGGAACTTAAGGCTGACTTGAGGCAGCAAGGACGTGACTACGCTGTGGCTCAGAAAGAGATTGTTGACCTGGAGAAACAGGTGACGGTGCTTTTAAAGGAATGCCGAGATATACAGCTTCGTTGTGGATTGGTGGGTCATGATTTCGCTGATAACGGTACAATTACTGCTGCTGATGAGATGAATGCAGAGTCTAATTCTGACGAAGTAATTTCAGAACGGCTTTTGACTTTTAGGGATATAAATGGATTAGTTGAGCAGAATGTCCAGCTCCGAAGCCTTGTACGCAGCCTTTCTGACCAACTTGAGGATAAAGATATGGAGTTGAAGGAGAAGTTTGAACTGGAGCTCAAAAAGCATACTGATCAGGCTGCCTCTAAAGTTGCAGCAGTGTTAGAAAGAGCTGAAGAGCAAGGGCGCATGATTGAATCACTTCACACCTCTGTTGCAATGTACAAACGGTTGTATGAGGAGGAACATAAACTTCATTCATCTTTCCCCCATTCTGCAGAAGCAGCTCCAGAAAATGGAAGGAAGGACCTCATGCTTCTTCTTGAAGGTTCTCAGGAAGCTACGAAAAAGGCCCAAGAACAAGCTGCTGAACGTGTCAGATCTCTTCAAGAGGATTTGGCGAAGTCTAGGAGTGAGATCATATCATTGCGATCAGAGCGTGACAAATTTGCTTTGGAAGCAAATTTTGCACGAGAGAGACTTGAAAGCTTTATGAAAGAATTTGAACATCAGAGAGATGAAGCTAATGGCATCCTAGCAAGAAATGTGGAATTCTCTCAGCTAATAGTTAATTACCAACGAAAGATACGTGAAAGTTCTGAATCTTTGCATACCGTCGAGGAACTTTCTCGAAAGCTAACTATGGAGGTGTCTTTTTTGAAGCATGAAAAAGAAATGTTGTCAAATTCTGAAAAAAGAGCTTCTGATGAAGTTCGTAGTTTGTCTGAGAGGGTCCACCGTCTGCAGGCGACTTTGGACACTATCCATAGCACTGAGGAATTTCGTGAGGAGGCTAGAACTGTGGAGAGGAGAAAACAAGAGGAGCATATAAGACAGATTGAGAGGGAATGGGCTGAGGCAAAGAAAGAGCTACAAGAAGAACGTGATAATGTTCGGACGCTCACACTTGACAGGGAACAGACTATAAAAAATGCCATGAGACAAGTTGAAGAAATGGGAAAAGAACTTGCTAAGGCCTTGCAAGCGGTTGCAGCTGCTGAGGCTAGGGCTGCTGTTGCAGAGGCTCGATACTCTGATCTGGAGAAAAAGTTGAAATCTTCTGAAACCAAGGTTGTTGAGATTAATGGTGAATGTGGACCCTCCTCGTCCTCAGCTCATGAGGCTGTTGTGGACTTGCATATTGAGAAAGAAGAGATAGAAAAATTGAAGGAAGAAGCACAGGCTAACAAAGCTCATATGCTACAGTATAAAAGCATAGCAGAGGTGAATGAAGCTGCACTGAAACAGATGGAATATGCTCATGAAAACTTCAGGATTGAGGCAGATAAGCTAAAGAAATCACTGGAAGCAGAGGTTATGTCACTTAGAGAGAGGGTTTCTGAACTTGAAAATGAAGCTATTTTGAAGTCCAAAGAAGCAGCATCTACAGCTGCAGGAAATGAAGAGGCTCTTGCTTCTGCTTTAGCTGAAATTGGTAGTCTAAAGGAAGAAAATTCAATCAAAATGTCCCAAATTGCGGCGATTGAAATTCAAATTTCTGCTTTGAAAGATGATTTGGAGAACGAGCATCGACGTTGGCGTTCTGCACAAGACAATTATGAAAGACAGGTCATCCTACAATCAGAGACAATTCAGGAGTTGACAAAAACATCACAAGCTTTGGCTTTGCTGCAGAAGGAGGCTTCTGAATTGCGTAAACTGGCAGATGCAAAAAATGCTGAAAATAACGAATTAAAGGGGAAGTGGGAAGTGGAGAAGTCAATGTTAGAGGTGGCAAAGAATGAAGCTGAAAAGAAATATGATGAGATTAACGAACAGAACAAGATCCTACATAGTCGGCTAGAGGCTTTGCACATCAAATTGGCTGAAAAGGACCGCAGATCTGTTGGAATATCCTCGAGTAGTGGTTTGGATCCACTTGGTGATGCTGGATTACAGAATGTGATTAATTATCTACGTCGCTCGAAGGAAATAGCAGAAACAGAGATCTCTTTGTTGAAACAGGAAAAGTTGCGATTACAATCCCAACTTGAGAGTGCTTTAAAGGCAACAGAGACAGCCCAAGCATCACTTCATGCTGAGCGTGCAAATTCAAGAACATTGTTGTTCACAGAAGAAGAGATCAAATCCCTACAACTTCAGGTTAGAGAAATGAACTTGCTTCGGGAAAGCAACATGCAAATCAGAGAGGAGAACAAGCATAATTTTGAGGAGTGCCAGAAATTACGTGAAGTAGCTCAAAAAGCTAGGATTGAGACTGAGAATTTGGAGGTTCTACTGAGGGAGAGTCAAACTGAAGTGGAAACTTGTAAGAAAGAAATTGAAATGCAAAGGACGGAAAAAGATCAATTGGAAAAGAGGGTTGGTGAGTTGCTTGAGCAGTCCAAAAATATTGATGTGGAAGATTATGAGCGCATGAAACATGATTTTCATCAGATGCAGATAAATCTAAGAGAGAAGGATGCTCAAATAGAGGAAATGAAGAGACATGTATCTGAGAAGCAGGATAGAATCTCAAAGTTGGAACAAGACATTGCGAACAGCAGGTTGGAACTAAGTGAGAGGGAGAACAAGATAAATGATATTTTGCAAGCTGAGGCCAATATGAAAGCAGAGTTAGAGAAGCAAAAGAAGGTGACAGCTCAATTAAAGAAGAGGTTGGAGGCCTTGTCAAGGGAAAAGGAGGAACTGAGCAAAGAGAATCAAGCTCTTTCCAAACAGTTGGAGGATTACAAACAAGGGAAAAGGTCCATTGGGGATGTTTCAGGTGAACAGGCCATGAAAGAGAAGGAGAAGGAGAAGGAAAAAGATTCCAGGCTACAGACTCTGGAGAAAGCTCTCGAGAGGCAGAGGGAGGAGTATAGGAAGGAGAGGGATGACCATCGAATGGAGAAAGCAAAGCGCCTGAAGACTGAGAAGACAATCGTGGATTCTATTAAGAATGTTAATCAGGAGAAAGCAAAGCTGGTAGATGAACTTGAGAAACATAAGCTGGCTCTTAAGAGGGTCTCAGACGAACTCGAAAAACTCAAGCATGCCAAAGGCAATCTACCTGAGGGTACCTCAGTGGTTCAGCTTCTTTCTGGGCCTCTCTTGGATGATCTTGCTGCTGCCTATGCACTGACTGTAGAAAATTTTGAGAAGTTGGCACATTCAGTTTTTAGTGAGCTTGGAGCTCGTGCTCTGCCGCTAGATCCTTCTTCAACTGTTGATACTTCTTCTTCAGCAGCTACTACTGGTTTAACAGCTCCTGCCCAACCTCCAAGTATCTTGACTCCAGTGGTTCCTGCAACCAGCTATTCACCAGCCAAAGCTGCCGAAGAAAGAGAGAAGAGATTGGCTATTCTTAAAACCAATGCTGAAACGCGTAAAACTGGAAGGAAGTTGGTTCGGCCTCGTCTTGTGAAAAGTGAGGAGCCCCAAGGTGATGTAGATATGGCTGAGATTGAGGGGCCTAACAATGGAGGGAAACCTGCACCTTCTCAGGACACAGAAACTCAAACTCTACCCCCAGTTCGCAAACGTTTAGCTTCTTCATCCACTTCTGATTTACAAGAAGATACTCAGATTCAAGGGGAGACTACCTCAGATGTGGCACCACCTGTGCTAAAGAGATCCAGAGGCTCAGATTCCCCACAAGAGGCTGCTGAAGGACAGGCTGCTGCTTCTTTGGAAAATCTTGAAACTCTTCGGGCCATCGAAGAATCTTTTGATGCCATTGCTGATTTACCTCAAGGCTCCAATGAGGAAGCCATCGATGTTGAGAAAGAAGAGGCAGAGATTTCTGAAGGACAAACTGAGGAGCCAAAGGAACCAGCACAAGTAGATGGCACGAGTGAAGTTGAATTGCCGAATGAGAGAGCCAGTGCTGTGGAAGAGGTTTTGGTTAAGCCAATTGAAAGAGAAGTGGTGTTTGATGATGGACCAAAGGATCAGGCTGAGCAAGACATTCAACCATCAATGATAGAATTGGGAAGTGAAAAGGAAGAGGGAGAGCTGGACCCAGATGTTACGGATATTGAGGGTGGTGGTGACATGTGTAATATAACAGGGGGCACAACAATAGGTGAGGGTCAGCCTGAGACTGTGGTAGTTCCTGTGACTTCACCAGCTGGGGGTGATGAGGAAGGTCTAGTCACTGCAGCAGTGGACATTGGTGATATTAATTCCCCTGAGATTCTAAATGATGAAAAAACAGCCGAAGGTGATGTAATGGAAGAGGTTGCTGAGGGTTCTGATAAGTCGAATGATGGTAATGAGCAGATAGCCGTGGAGACTGACCAAACTCCTGAAGCTGCTATGGGTTCTGAAAGTACTTCGACTAGTACTAGTACTGTTGTAGATGTTGGTGTTTCAAAACAAGGTAGCCCCACCGTACCAGCAGATCCAGAAGAGGTAAAACAGGCATTGCCTGTTGGTAGCAGCTCAACTACCATAAATTTACAGGAGAGGGCTAGACAGAGAGCAATGCTTAGACAGGCTGGAGTTCTTTCTCCTTCAGTTGGTAGAGGCCGTGGAAGGGCAATAACTCGTGGTCGAGGTGTGCGGGGTGGACGGGGACGTGCTGGACGTGGACAATCATCTGGTGATCAAGGTTAA
Protein Sequence
- >VIT_19s0085g01090
MPLFISDEEYSRCSNDVALVAEKADSFIRDLYNELQTVKAQADAASITAEQTCSLLEQKYISLSQEFSKLESQNAQLNSSLQERLSELAQIQAEKHQLHLKSIEKDGEIERLSTEESELHKSKRQLLEFLEHKDLEISEKNATIKSYLDKIVNMTDTAALREARLSDAEAELSRSKAACARLLQEKELIERHNVWLNDELTSKVKSLTELRRTHVELEADMSTKHSDVERRLNECSSSLKWNKERVKELEMKLTSMQQELCSSKDAAAANEQRLSAEIMTVNKLVELYKESSEEWSRKAGELEGVIKALETHLIQVENDYKERLEKEVFARKELEKEAADLKGKLEKCEAEMETSRRANELNLLPLSSLITGTTWLDSFQTNDMVEDNCMLVPKIPAGVSGTALAASLLRDGWSLAKMYSKYQEAVDALRHEQLGRKHSEAMLEQVLHEIEEKAVVILDERAEHERMVEGYSAINQKLQQSLSEQSNLDKTIQELKADLRQQGRDYAVAQKEIVDLEKQVTVLLKECRDIQLRCGLVGHDFADNGTITAADEMNAESNSDEVISERLLTFRDINGLVEQNVQLRSLVRSLSDQLEDKDMELKEKFELELKKHTDQAASKVAAVLERAEEQGRMIESLHTSVAMYKRLYEEEHKLHSSFPHSAEAAPENGRKDLMLLLEGSQEATKKAQEQAAERVRSLQEDLAKSRSEIISLRSERDKFALEANFARERLESFMKEFEHQRDEANGILARNVEFSQLIVNYQRKIRESSESLHTVEELSRKLTMEVSFLKHEKEMLSNSEKRASDEVRSLSERVHRLQATLDTIHSTEEFREEARTVERRKQEEHIRQIEREWAEAKKELQEERDNVRTLTLDREQTIKNAMRQVEEMGKELAKALQAVAAAEARAAVAEARYSDLEKKLKSSETKVVEINGECGPSSSSAHEAVVDLHIEKEEIEKLKEEAQANKAHMLQYKSIAEVNEAALKQMEYAHENFRIEADKLKKSLEAEVMSLRERVSELENEAILKSKEAASTAAGNEEALASALAEIGSLKEENSIKMSQIAAIEIQISALKDDLENEHRRWRSAQDNYERQVILQSETIQELTKTSQALALLQKEASELRKLADAKNAENNELKGKWEVEKSMLEVAKNEAEKKYDEINEQNKILHSRLEALHIKLAEKDRRSVGISSSSGLDPLGDAGLQNVINYLRRSKEIAETEISLLKQEKLRLQSQLESALKATETAQASLHAERANSRTLLFTEEEIKSLQLQVREMNLLRESNMQIREENKHNFEECQKLREVAQKARIETENLEVLLRESQTEVETCKKEIEMQRTEKDQLEKRVGELLEQSKNIDVEDYERMKHDFHQMQINLREKDAQIEEMKRHVSEKQDRISKLEQDIANSRLELSERENKINDILQAEANMKAELEKQKKVTAQLKKRLEALSREKEELSKENQALSKQLEDYKQGKRSIGDVSGEQAMKEKEKEKEKDSRLQTLEKALERQREEYRKERDDHRMEKAKRLKTEKTIVDSIKNVNQEKAKLVDELEKHKLALKRVSDELEKLKHAKGNLPEGTSVVQLLSGPLLDDLAAAYALTVENFEKLAHSVFSELGARALPLDPSSTVDTSSSAATTGLTAPAQPPSILTPVVPATSYSPAKAAEEREKRLAILKTNAETRKTGRKLVRPRLVKSEEPQGDVDMAEIEGPNNGGKPAPSQDTETQTLPPVRKRLASSSTSDLQEDTQIQGETTSDVAPPVLKRSRGSDSPQEAAEGQAAASLENLETLRAIEESFDAIADLPQGSNEEAIDVEKEEAEISEGQTEEPKEPAQVDGTSEVELPNERASAVEEVLVKPIEREVVFDDGPKDQAEQDIQPSMIELGSEKEEGELDPDVTDIEGGGDMCNITGGTTIGEGQPETVVVPVTSPAGGDEEGLVTAAVDIGDINSPEILNDEKTAEGDVMEEVAEGSDKSNDGNEQIAVETDQTPEAAMGSESTSTSTSTVVDVGVSKQGSPTVPADPEEVKQALPVGSSSTTINLQERARQRAMLRQAGVLSPSVGRGRGRAITRGRGVRGGRGRAGRGQSSGDQG