Information report for VIT_14s0068g00720
Gene Details
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Functional Annotation
- RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.
Homologous
- Arabidopsis thaliana — AT5G07350
Gene Resources
- Pfam: PF00565 PF00567
- UniProt: D7SVE1
- EMBL: FN595232
- AlphaFoldDB: D7SVE1
- KEGG: vvi:100256648
- OMA: YINRYFN
- InterPro: IPR002999 , IPR016071 , IPR016685 , IPR035437 , IPR047395
- PANTHER: PTHR12302 , PTHR12302:SF2
- SUPFAM: SSF50199 , SSF63748
- PROSITE: PS50304 , PS50830
- Gene3D: 2.30.30.140 , 2.40.50.90
- OrthoDB: D7SVE1
- CDD: cd20443
- eggNOG: KOG2039
- STRING: 29760.D7SVE1
- HOGENOM: CLU_005966_2_0_1
Sequences
CDS Sequence
- >VIT_14s0068g00720
ATGACTGCTGCAGCAGCACCCTCAGGATGGTACAAGGGAAGAGTGAAAGCTGTGCCTTCCGGGGATTCTATGGTGATAATGGCAGCTCAGAAGGCAGATCTCAGTCCACCACCGGAGAAGACTATCACATTATCATACATCATTGCTCCTAGATTGGCCCGTAGAGGTGGTATTGATGAACCATTTGCATGGGATAGTAGAGAGTATTTGAGGAAACTCTGCATAGGAAAGGAGGTTAGCTTCAGAGCGGATTACACTGTGTCATCCATAGGGAGGGAATTTTGCTCTGTCTTCCTACAAGATAAGAATGTTACATCAATGGTTGTTGCTGAAGGCTGGGCAAAGGTTAGAGAACAAGGGCAACAGAAGGGAGAAGCAAGCCCTTTCTTAGCAGAATTTCTACGTCTTGAGGAGCAAGCTAAGCAGCAAGGTTTAGGCCGATGGAGCAAGCTACCTGGTGCTTCTGAGGCATCAATCAGGAAATTACCTCCCTCTGCTGTAGGTGATCCCAGTAACTTGGATGCCATGGGTCTCTTATCTGCAAACAAGGGCAGGCCTATGCAGGGCATTGTTGAGCAAGTTCGTGATGGAAGTACAGTCCGAGTTTATTTGCTTCCAGAGTTTCAGTTTGTTCAGGTTTTTGTTGCCGGAATCCAGTCCTCATCCATGGGAAGAAGGGGAGTTGCAGATTCTGTTCTTGAGCCTGAAACAAGTTCCGATGAACCAAACGGAGAAGTTTCTGCTAAAATTCGTGTCCCTTTAACATCAGCACAGAGAGTTGCAGCTTCTTCTGCATCATCAACTGAAATTGCACCAGATCCTTTTGGCAAGGAAGCTAAGCACTTCACAGAGACACGTGTTTTGAACAGAGATGTACGCATTGTTCTGGAGGGAGTTGACAAATATAGCAACCTAATTGGTTCAGTGTATTATCCTGATGGTGATTCAGCAAAGGATCTGGCACTGGAGCTTGTCCAAAATGGTCTGGCTAAATTTGTTGATTGGAGCGCCAACATGATGGAGGAAGATGCGAAAAGACGTTTGAAATCAGCTGAACTTCAAGCAAAGAAAGAGAGGCTAAGGATTTGGACAAACTATGTGCCCCCAGCTACAAATTCAAAGGCAATCCATGACCAGAATTTTACAGGAAAAGTTGTGGAGGTTGTGAGTGGAGACTGCATCATTGTTGCTGATGATGCTGTCCCATATGGCAGTCCATTGGCAGAACGACGAGTCAATCTCTCAAGTATCAGGTGTCCTAGGATGGGTAATCCTCGTAGAGATGAAAAACCTGCTCCATATGCCCGTGAGGTTAAGGAGTTTCTTCGGACACGCCTTATTGGTCGTCAGGTAAATGTTTCAATGGAATATTCAAGAAAGGTCGGCATGGCTGATGGAGTTGTTGCCACTGCTGGTGCAGCAGATTCAAGGATAATGGATTTTGGATCAGTATTCTTGGTATCTCCATCCAATGTTGAGGGCGATGTGGTCTCATCTACTCTGCCCACTGCTGGCAGCCAGCAGGCTGGGGTAAATATTGCTGAGCTGCTGGTTGGACGTGGCTTTGGCACTGTCGTAAAGCACAGGGACTTTGAGGAAAGATCCAATTATTATGATGCCCTCCTGGCAGCTGAATCACGTGCCATTGCTGGGAAGAAAGGAATCCATTCTGCAAAGGATTCTCCAGTGATGCATATTACAGACCTTGTAACGGCCTCAGCAAAGAAAGCAAAAGATTTCTTGCCATTTTTGCAACGAAGTAGAAGGCTTCCTGCTATTGTGGAATATGTCCTTAGTGGTCATCGGTTCAAACTGCTAATTTCCAAGGAAACTTGCAGCATTGCATTTTCGTTCTCTGGTGTTAGATGTCCTGGTCGTGATGAACCATATTCAGATGAAGCAATTGCATTGATGAGAAGGAAGATACTGCAGAGGGATGTTGAGATTGAAGTTGAAACAGTAGATAGAACAGGGACATTCTTGGGATCTTTATGGGAATCAAAGACAAATATGGCTGTGGTACTTCTGGAAGCTGGACTGGCGAAACTTCAAACTACTTTTGGTGCTGACAGGATGGCAGATGCTCATCTTCTTGCGAAGGCTGAGCAATCAGCAAAACAACAGAAATTGAAAATATGGGAGAATTATGTTGAGGGTCAAGAAATTGCTAATGCTTCAGGCACTGAGAACAGCAGACAGAAAGAAGTACTCCAGGTTGCCGTTACAGAAATTTTGGATGGTGGTAGATTCTATATCCAACCAGTTGGAGAACAGAAAGTTGCCTCTATCGAGCAGCAACTCGCGTCATTGAATCTTCAAGAAACTCCTTTAATTGGCGCCTTTAATCCTCGGAAGGGTGATATTGTTCTTGCTCAATTTACTGCTGATAATTCTTGGAACCGAGCTATGATTGTCAATGCACAACGAGGAGCTGTCCAATCCCCAAAAGATGAATTTGAAGTTTTCTACATTGACTATGGGAATCAAGAAGTAGTTCCTTATGATCGGTTACGTCCTCTTGATCCTTCAGTATCCTCCATGCCTGGCCTGGCTCAGTTATGCAGCCTAGCATACATAAAGGTTCCAAGCTTAGAGGAGGATTTTGGGCAGGAAGCAGCTGAGTATCTAAGTGAGCACACTCTTAATAGTTCAAGAGAATTGAGGGTAATGATAGAGGAAAGGGATACTTCAGGAGGAAAGGCGAAAGGACAGGGAACCGGCACTGTCCTTATCGTAACTTTGGTTGATGTTGAGGCTGGTACAAGCATCAATGCAGCCATGTTGAAGGAAGGGCTTGCAAGGTTGGAAAGAAAGAAGAGGCGGGACTCCAGAGAGAGACAGTCTGCCCTTGATAACTTGGAAGAGTTCCAGGAAGCAGCAAAGAGCAAGCGACTGAACATGTGGCAGTATGGAGACATCCAGTCTGATGATGAGGAATCAACTATGCCAGTTAAGAATGCTGGTGGTCGGCGTTAG
Protein Sequence
- >VIT_14s0068g00720
MTAAAAPSGWYKGRVKAVPSGDSMVIMAAQKADLSPPPEKTITLSYIIAPRLARRGGIDEPFAWDSREYLRKLCIGKEVSFRADYTVSSIGREFCSVFLQDKNVTSMVVAEGWAKVREQGQQKGEASPFLAEFLRLEEQAKQQGLGRWSKLPGASEASIRKLPPSAVGDPSNLDAMGLLSANKGRPMQGIVEQVRDGSTVRVYLLPEFQFVQVFVAGIQSSSMGRRGVADSVLEPETSSDEPNGEVSAKIRVPLTSAQRVAASSASSTEIAPDPFGKEAKHFTETRVLNRDVRIVLEGVDKYSNLIGSVYYPDGDSAKDLALELVQNGLAKFVDWSANMMEEDAKRRLKSAELQAKKERLRIWTNYVPPATNSKAIHDQNFTGKVVEVVSGDCIIVADDAVPYGSPLAERRVNLSSIRCPRMGNPRRDEKPAPYAREVKEFLRTRLIGRQVNVSMEYSRKVGMADGVVATAGAADSRIMDFGSVFLVSPSNVEGDVVSSTLPTAGSQQAGVNIAELLVGRGFGTVVKHRDFEERSNYYDALLAAESRAIAGKKGIHSAKDSPVMHITDLVTASAKKAKDFLPFLQRSRRLPAIVEYVLSGHRFKLLISKETCSIAFSFSGVRCPGRDEPYSDEAIALMRRKILQRDVEIEVETVDRTGTFLGSLWESKTNMAVVLLEAGLAKLQTTFGADRMADAHLLAKAEQSAKQQKLKIWENYVEGQEIANASGTENSRQKEVLQVAVTEILDGGRFYIQPVGEQKVASIEQQLASLNLQETPLIGAFNPRKGDIVLAQFTADNSWNRAMIVNAQRGAVQSPKDEFEVFYIDYGNQEVVPYDRLRPLDPSVSSMPGLAQLCSLAYIKVPSLEEDFGQEAAEYLSEHTLNSSRELRVMIEERDTSGGKAKGQGTGTVLIVTLVDVEAGTSINAAMLKEGLARLERKKRRDSRERQSALDNLEEFQEAAKSKRLNMWQYGDIQSDDEESTMPVKNAGGRR