Information report for VIT_12s0059g00530
Gene Details
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Functional Annotation
- Encodes EDM2 (enhanced downy mildew 2). The predicted protein bears typical features of transcriptional regulators. EDM2 contains two putative bipartite nuclear localization signals (NLS) two zinc-finger-like motifs, a Proline-rich region and a large aspartic acid-rich region. Both zinc-finger-like stretches resemble the PHD (plant homeodomain) finger motif. Mutations in EDM2 comprise RPP7 mediated resistance against Hyaloperonospora parasitica isolate Hiks1 (HpHiks1). EDM2 may function as a direct or indirect regulator of RPP7 expression.
Homologous
- Actinidia chinensis: CEY00_Acc21598, CEY00_Acc26309
- Citrullus lanatus: Cla97C09G182340
- Glycine max: Glyma.18G086000
- Gossypium hirsutum: Gohir.A01G085300
- Juglans regia: Jr02_25170, Jr09_15850
- Lactuca sativa: gene-LSAT_9X105420
- Medicago truncatula: Medtr8g009000
- Populus trichocarpa: POPTR_001G359900v3
- Prunus persica: PRUPE_4G227500, PRUPE_4G227700
- Rosa chinensis: RchiOBHm_Chr5g0041831
- Setaria viridis: SEVIR_2G166700v2
Gene Resources
- Pfam: PF00628 PF13771 PF12678 PF13639
- UniProt: F6HIB0
- EMBL: FN595765
- AlphaFoldDB: F6HIB0
- InterPro: IPR001965 , IPR013083 , IPR055198
- PANTHER: PTHR46235 , PTHR46235:SF13
- Gene3D: 3.30.40.10
- OrthoDB: F6HIB0
- CDD: cd15565 , cd15566
- eggNOG: ENOG502RUDE
- STRING: 29760.F6HIB0
- HOGENOM: CLU_003552_2_0_1
Sequences
CDS Sequence
- >VIT_12s0059g00530
ATGAGGAGATATACGTTTATAGATGACCGGGATGACAATGATGAAGATGAAGAAAATGACGAAGACAATGATGAACTGTTTGATTCTGTTTGTGCAATTTGTGACAATGGCGGTGAACTTCTATGTTGTGAAGGAAGGTGCTTAAGATCTTTTCATGCAACTGTAGATGCTGGAACTGAATCCTTTTGTGAATCTCTTGGGTTTTCTGATGCTCAAGTTGAAGCAATTCAGAATTTTCTTTGTAAGAATTGTCAATATCAGCAGCATCAATGCTTTGTTTGTGGCATGTTGGGATCTTCTAATGAGTCATCTGGTGCAGAAGTCTTCCGTTGTGCGTCTGCAACTTGTGGTCGGTTTTATCATCCATATTGTGTTGCGAAACGGCTCCACCCTATGAATAACATTCTAGCAAAACATCTTCAAAATAAAATTGCTGGGGGGGTCTCATTTACATGTCCTCTCCACAAATGTTTTGTTTGCAAAAGAGGAGAAAATAAAGGGGTTGATGACTTGCAGTTTGCGCTGTGTAGACGCTGTCCTAAGGCATACCACAGAAAATGTTTACCCGGGAATATTTCTTTTGAATGTATCTATAATGAAAATATCATGCAAAGGGCTTGGATTGGTCTGTTGCCAAATCGGATCTTGATATATTGCATGGAGCATAAGATAAACAGAAAACTTCGAACTCCCGAAAGAAACCACATAAGATTTCCTGATCCTGAAAGTAAAGGGAAGAAACATGTTTCAGAGCTACCATCAAGCAATGAGAAAGTTATGTCAAAGAAAAGAAACATAGTTTCTGAAATTTTCCCAGCAGAAAGCACTGCAGTAAAGATGACAAAGTTGGAGGTTCATAGAGTTGTTAAAGATGTTGATTCTACGAAATTTTTTGAGAAAAGATGTTCCAGCCAAGGTTTTGATCCCCCAACCAAACAGAAAATTAATGATGCAACTAAAAAGTTTTTGAGGGACAATGTCAAGTCTGTCCCAGTCAAAATATGCGCGTCTGTTGCAGTAAAGGGAACCCAGTCATCCTTGAGAAACTATAATATTAAGCCTAAGCAGCAGAATATCCCAAGTAAAGTGGAGAAGATCACATCACTTAAGCCTTCAATGAAGAGGGCAAGCAGCTCACAACCTTTGATGGATGCTGAATTGGAAACACGAATAGTTGATTTAATGAAAAGTACCACTTCTTCCTTTAGTTTGGAAGAATTCAGAGAAAAGCAGAAAGTCTTATGTTCATACTCAAAAAATGTACTGGACAGCACCATTACGCAAGGAAAGGTGGAGGTTTCTGTCAAGGCCATTCGGACAGCCTTAGAGAAGTTAGAAAAGGGATGTAGCATTGAAGATGCTAAAGCTGTTTGTGAACCTGAGGTTCTCAATCAGATTATGAGATGGAAGAGAAAGCTAAAAGTTTACCTTGCACCTTTTCTGCATGGCATGCGTTACACATCCTTTGGCCGTCATTTCACAAAAGTGGAGAAACTTAGGGAGGTTGTTGATAGGCTCCATTGGTATGTGCAACATGGTGATATGATAGTGGACTTCTGCTGTGGTTCCAATGATTTTAGTTGCTTGATGAAAGAAAAGCTTGACAAAGTGGGAAAGAGCTGCTCATTTAAAAATTATGATCTTATTCAACCCAAGAATGATTTCAGTTTCGAGAAGAGAGATTGGATGAGCATTCATTTAGATGAACTACCTGCAGGATCTCAACTGATCATGGGGCTTAATCCTCCCTTTGGGGTCAAAGCATCTCTTGCCAACAAGTTCATTGACAAGGCACTAAGTTTTAGACCAAAGCTCCTTATTCTTATCGTTCCAAAAGAAACCAAAAGACTTGATGAAAAAGACTCTGCATATGATTTAATATGGGAGGATGAAGATATACTATCAGGAAAGTCATTTTACCTGCCTGGATCTGTTGACATGCATGACAAGCAATTAGAGCAATGGAACTTACTGCCACCATTGCTCTATCTTTGGAGTCGCCCTGACTGGACTTCTAGGCACAAGGCAGTGGCTCAAAAGTGTGGCCACATATCCATAGAGCAAAAGGACTTTCTTGTGGAAGGCAATAATGTTGAAAGAGAAGTCTCAAATTATCTAATGGAGGAGAATCATGACTGTTATGGTGATTTCTCCAATCTAATGAATGACTATGGTGATATCTCCAGCATCTTGGACAATGTTCCTGAAGATAATGATGAAAGTGAACCTGAAGGTACTGGGATGTTGTTTTTTGGTCCTTCTTCCAGTAACAGAAGCAGTGAAGTTTTGAAGAAAGATGAGTGTGACATGGGACCTTCTATTGAGAGACTAAAGAAGGAATGTGAAGGAAAGGAGGATGTAGACCGGATTGTGACATCAATAGAGCAAAGTGGCAACAGTGAGACAGAGCCTAAAGTTGATGGAATGTGCATTGACATGGAAATATCATCTCCAGTTAATTCTGCATTTGACTGCACAGACTTCCAAAGTTTGTTGGAGGACAAGGCATATGAAGCAGTTGAAGTTGGAAAAATTGGCTTTGGAAATCTCCAGAGAAGGCTCTCGGGAAATAAGTTGGGGTTTAAAAAAAATTATGTGGGAATCAGGGCCAGTATTTCAAGTGACACTGATGGACAAAGTTTGATGAATCAACAACCATTTCCTAGAGAAACTCATAAACTGTCAACCCGAGCCAATATTGGTTTCAATAGTCATAATCAGTTTCATGGGTACATCAATCCTGGTGTCGGTACTTCTGTTGGGGCATCTTACAAAAATGAGCCAGATAAGCAAAGGTCTGAGACAAATACAAGCACACACCTCCCGCTCAACAGACAAAACCATGATCTTCCATCTCAAGGGTTCATTTTACCTAATCAAGGTTCTGACTCTTACCATGTTGGTTCACTCCCTTATGCTCCTGCACCCATGGCCCAATCATCCTACCCCAGGGCGAACTACTCATCGATGCAGCTAGATGGACCTCAATCAGGGCAGTTAAATCATATGATGCCAAGTAACTATAGGCCTCCTAAGTGA
Protein Sequence
- >VIT_12s0059g00530
MRRYTFIDDRDDNDEDEENDEDNDELFDSVCAICDNGGELLCCEGRCLRSFHATVDAGTESFCESLGFSDAQVEAIQNFLCKNCQYQQHQCFVCGMLGSSNESSGAEVFRCASATCGRFYHPYCVAKRLHPMNNILAKHLQNKIAGGVSFTCPLHKCFVCKRGENKGVDDLQFALCRRCPKAYHRKCLPGNISFECIYNENIMQRAWIGLLPNRILIYCMEHKINRKLRTPERNHIRFPDPESKGKKHVSELPSSNEKVMSKKRNIVSEIFPAESTAVKMTKLEVHRVVKDVDSTKFFEKRCSSQGFDPPTKQKINDATKKFLRDNVKSVPVKICASVAVKGTQSSLRNYNIKPKQQNIPSKVEKITSLKPSMKRASSSQPLMDAELETRIVDLMKSTTSSFSLEEFREKQKVLCSYSKNVLDSTITQGKVEVSVKAIRTALEKLEKGCSIEDAKAVCEPEVLNQIMRWKRKLKVYLAPFLHGMRYTSFGRHFTKVEKLREVVDRLHWYVQHGDMIVDFCCGSNDFSCLMKEKLDKVGKSCSFKNYDLIQPKNDFSFEKRDWMSIHLDELPAGSQLIMGLNPPFGVKASLANKFIDKALSFRPKLLILIVPKETKRLDEKDSAYDLIWEDEDILSGKSFYLPGSVDMHDKQLEQWNLLPPLLYLWSRPDWTSRHKAVAQKCGHISIEQKDFLVEGNNVEREVSNYLMEENHDCYGDFSNLMNDYGDISSILDNVPEDNDESEPEGTGMLFFGPSSSNRSSEVLKKDECDMGPSIERLKKECEGKEDVDRIVTSIEQSGNSETEPKVDGMCIDMEISSPVNSAFDCTDFQSLLEDKAYEAVEVGKIGFGNLQRRLSGNKLGFKKNYVGIRASISSDTDGQSLMNQQPFPRETHKLSTRANIGFNSHNQFHGYINPGVGTSVGASYKNEPDKQRSETNTSTHLPLNRQNHDLPSQGFILPNQGSDSYHVGSLPYAPAPMAQSSYPRANYSSMQLDGPQSGQLNHMMPSNYRPPK