Information report for VIT_04s0008g03170
Gene Details
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Functional Annotation
- Encodes a ubiquitin-specific protease which catalyzes deubiquitination of histone H2B and is required for heterochromatin silencing.Loss of function mutations display autonomous endosperm development and embryo arrest. Loss of function also results in an increase in expression of the PcG complex target gene PHE1.
Homologous
- Arabidopsis thaliana — AT3G49600
Gene Resources
- Pfam: PF00443
- UniProt: F6H2X7
- EMBL: FN595231
- AlphaFoldDB: F6H2X7
- KEGG: vvi:100259355
- InterPro: IPR001394 , IPR006615 , IPR018200 , IPR028889 , IPR029071 , IPR033841 , IPR035927 , IPR038765 , IPR044743 , IPR050164
- PANTHER: PTHR24006 , PTHR24006:SF722
- SUPFAM: SSF143791 , SSF54001 , SSF54236
- PROSITE: PS00972 , PS00973 , PS50235 , PS51283
- Gene3D: 3.10.20.90 , 3.30.2230.10 , 3.90.70.10
- OrthoDB: F6H2X7
- CDD: cd01795 , cd02668
- eggNOG: KOG1863
- STRING: 29760.F6H2X7
- HOGENOM: CLU_010287_0_0_1
Sequences
CDS Sequence
- >VIT_04s0008g03170
ATGAGTCGACCGAGTACGCGCAGCAGCAAGAATAAAAGACATCGGGCGGACGACAATGCTGCAACTACTTGCCAAATATACAGGAAAATTCATTCGACGGGGGAGGTGACCAAGGACGATGCGAATCAGTTGTATATGATTTGGAAGCCTATTTGTCAAGGTTGTCGAGTGAATACAAAAGATAACCCCAACTGTTTTTGTGGTCTCATTCCGCCTCCCAATGGAAGCCGAAAGTCCGGGTTATGGCAGAAAATGTCCGACGTGGTTCTGGCACTCGGTCCTGATCCTTTCAAGGATCTCCGAGCTTCGTCGGAGTATTCCCCCGCGGGCCTCACCAACCTTGGCGCCACTTGCTACGCCAACAGCATTCTCCAATGCCTGTACATGAACAAGACTTTCAGACGAGGTCTTTTCTCTGTTGAACCGGGTCTTTTGAAACAATATCCAGTTCTTGATCAACTTGCCAGGCTTTTTGCACAGCTGCACGCCAGTAAACTGGCTTTTATAGACTCTGCTCCCTTTATTAAAACGCTAGAGTTAGATAATGGCGTTCAACAGGATAGCCATGAGTTTCTTACCTTACTTCTTTCTTTGCTTGAGCGATGTCTCAGCCATTCTCAAGTTTCAAGAGCCAGAACCATTGTTCAGGACCTTTTCCGAGGAAGTGTGTCGCATGTCACCACGTGCTCAAAATGCGGAAAAGATTCTGAAGCTTCCTCGAATATGGAAGATTTTTATGAACTGGAGTTGAATGTCAAGGGTTTGAAAAGTTTAGACGAGAGTTTAAATGATTACCTTAGTGTGGAAGAGCTTCATGGAGATAACCAATATTTTTGTGAGTCATGTGGAACAAGAGTTGACGCCACCCGTAGCATTAAGTTACGCACACTGCCTTATGTCCTTAATTTCCAGCTCAAGCGCTGTGTTTTCCTTCCAAAGACTACAACAAAGAAGAAAATCACTTCTGCATTCTGTTTTCCTGGAGAATTGGATATGAGAGAGAGGCTATCTGAACCTTCTGATTTGGAACTAATATATGACTTGTCAGCTGTGCTGATTCACAAGGGGACTACTGTGAACAGTGGCCATTACATAGCTCATATTAAGGATGAGAATACAGGGCAATGGTGGGAATTTGATGATGAGCATGTCTCAAACCTGGGTCATCACCCATTTGGAGAGGGGTCTTCAAGTTCTGCTGCTAAACCTGTTCAAACTGAGCCATCTGTTCATCTGTCTTCCACTGAACCGATGAATGGTGTCATAAATGGAAATCATATAAATATTGGTCAGCTACAATCTTCAGAATGTAGTATTGTTAGTGGTTCACAGACATACTCATCTGGTGATGCATACATGTTGATGTATAATCTTAGGCGTACCACCAAGAGTGGTGAAGTTAGACAAACTGTATCTGGTGCCAACCATATGGAAATAGAAGGAGATATAATTTATTCAGACAATGATGCTGCTCTTCCAGCTCATCTTTATGAAGAGATAAAAGAACTAAATGCCTCGTATCTTGATGCTTGTCAACAATACAAATCAAAGAAGGAAAGAGAGTTGGATTGTATCACAGAACGGAGGCAGGAAGTGCGATCGGTTCTTTCTGAAGGCCCTGTTCTATCACTTGAGGATCCATATTTTTGGATTTCTACAGACTGGCTTCGCCTGTGGGCTGACAACATCACTCCACCTGTTCTTGACAACACCCCTATCCAGTGCTTGCATGGAAAAGTCCCAGTATCAAAAGTTGGTTCCATGAAGCGCTTGTCATCTAAAGCTTGGAACATGTTGTTCTCTAAGTATGGAGGGGGACCTGCACTGTCAAATGATGACTACTGCATCAATTGCCTTGTGGAAGGGGCTAGCACTATGGTTTCTGCTGATAACTATAGGGATCGGCGAAAAGTAATGAAAGAACTTGCTGATGCAGTACACTCAGGGAAGTGTCTAGATGGAAATTTGTACTATGTTTCAAAATCATGGTTCCAACAGTGGGCACGCAGAAAAATCATTGACTCACCATGCGATGCTGATGCAGGACCAACAGCTTCAATTAGATGCCCTCATGGGAAACTTATGCCTGAGCAAGCTCCTGGTGCTAAGCGTTTGCTGGTTCCTGAAAATCTCTGGCTCTTCTTCTGTGAAAGTGCTAACACAGTCAAACCTGATGATACCTTGGGCTGTTCAGTTTTTCCTTCAGATGTGGAACCATGTGCTACATGCAGTATGGAGCTTACGGAAGTGGCAAGCATAGAAGATACACTAAGAGAATTCAAGCTCAAACAGCGTCAGAATCATGAAAAAATAGCATTGGGAAAAGGTTTTGCACTTTCTTCACATTGCAAGTATTATTTGCTGCCCTCTTCATGGCTGTCAACATGGAGAAGCTACATCAATGCAAATGGAAAGAATGTTTCATCATCAGTGCAACCTGAAATGTTAGATAGTGTCATTGATATGATGAAATGTGGAAAACATTCAAGGCTTCTGGAAAGACCTCTTGAACTGATTTGCAAACGTGGCACGATTTTCCAAAGGTTTTCTGCTACAGATGGGTTAACAATCATAACTAAGGATGATTGGAAATTCTTCTGTGAGGAGTGGGGCTGTACTGAAGAGATGGGCATCTCCGCTGAAATTGAGTTCAGTAACTGTGTGGCAAATAATTTAGCTGGGTCCTGCGAAGAAATGCCAATTATTGAGGAGCATATGAGTCCTCATGATGAAGTGAATGAGGAAATTGAGTCTAGACAACCTGTGATTAAGACTTCTCCTGAGGTATGTGAGGTTTGCATTGGAGAAAGAGAAAGCTGTGAGTTAATGCAAAAACTTAACTATTGCAACGAGGATATACGTGTCTGCTTTGTACGTGGTAAGGAAGCTCCTAAATCAATTTTAGAAGCATCTGGGACCATTTCTGAGCCAGATCGCCGAATCTCTAAGCGCTCTCGAAAGACAAATTTTGGAAATTCGATAAATCTGAAAGTTTCTGGGTCCACATCAATCTACCAGTTAAAAATGATGATATGGGAATCCTTTGGGGTAATTAAGGAAAACCAGATACTTCACAAGGGTTCTACAGTAATTGATGGTGAAACTTCCACTCTTGCTGACATGAATATATTTCCTGGAGATCTTCTTTGGGTGAAAGATTCAGAGATCCATGAGTATCGGGATATTGCAGATGAGCTCTCTGACCATAAAATGGAGGTGCAACAGGCTGAGGAAGGGTTCCGGGGAACGCTTTTGACATCAAATATCTCGTCCCAGGTTGTCTAA
Protein Sequence
- >VIT_04s0008g03170
MSRPSTRSSKNKRHRADDNAATTCQIYRKIHSTGEVTKDDANQLYMIWKPICQGCRVNTKDNPNCFCGLIPPPNGSRKSGLWQKMSDVVLALGPDPFKDLRASSEYSPAGLTNLGATCYANSILQCLYMNKTFRRGLFSVEPGLLKQYPVLDQLARLFAQLHASKLAFIDSAPFIKTLELDNGVQQDSHEFLTLLLSLLERCLSHSQVSRARTIVQDLFRGSVSHVTTCSKCGKDSEASSNMEDFYELELNVKGLKSLDESLNDYLSVEELHGDNQYFCESCGTRVDATRSIKLRTLPYVLNFQLKRCVFLPKTTTKKKITSAFCFPGELDMRERLSEPSDLELIYDLSAVLIHKGTTVNSGHYIAHIKDENTGQWWEFDDEHVSNLGHHPFGEGSSSSAAKPVQTEPSVHLSSTEPMNGVINGNHINIGQLQSSECSIVSGSQTYSSGDAYMLMYNLRRTTKSGEVRQTVSGANHMEIEGDIIYSDNDAALPAHLYEEIKELNASYLDACQQYKSKKERELDCITERRQEVRSVLSEGPVLSLEDPYFWISTDWLRLWADNITPPVLDNTPIQCLHGKVPVSKVGSMKRLSSKAWNMLFSKYGGGPALSNDDYCINCLVEGASTMVSADNYRDRRKVMKELADAVHSGKCLDGNLYYVSKSWFQQWARRKIIDSPCDADAGPTASIRCPHGKLMPEQAPGAKRLLVPENLWLFFCESANTVKPDDTLGCSVFPSDVEPCATCSMELTEVASIEDTLREFKLKQRQNHEKIALGKGFALSSHCKYYLLPSSWLSTWRSYINANGKNVSSSVQPEMLDSVIDMMKCGKHSRLLERPLELICKRGTIFQRFSATDGLTIITKDDWKFFCEEWGCTEEMGISAEIEFSNCVANNLAGSCEEMPIIEEHMSPHDEVNEEIESRQPVIKTSPEVCEVCIGERESCELMQKLNYCNEDIRVCFVRGKEAPKSILEASGTISEPDRRISKRSRKTNFGNSINLKVSGSTSIYQLKMMIWESFGVIKENQILHKGSTVIDGETSTLADMNIFPGDLLWVKDSEIHEYRDIADELSDHKMEVQQAEEGFRGTLLTSNISSQVV