Information report for VIT_04s0008g02170
Gene Details
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Functional Annotation
- Encodes a ribonuclease III family protein that is required for endogenous RDR2-dependent siRNA (but not miRNA) formation.
Homologous
- Actinidia chinensis: CEY00_Acc06637
- Arabidopsis thaliana: AT3G43920
- Citrullus lanatus: Cla97C08G152540
- Gossypium hirsutum: Gohir.A06G080450, Gohir.D06G080000
- Juglans regia: Jr05_05420
- Manihot esculenta: MANES_03G056500
- Oryza sativa: LOC_Os01g68120, OsDCL3a, OsDCL3b
- Prunus avium: Pav_sc0000131.1_g350.1.mk
- Prunus persica: PRUPE_1G401900
Gene Resources
- Pfam: PF00270 PF00271 PF02170 PF00636
- UniProt: F6H2U0
- EMBL: FN595231
- InterPro: IPR000999 , IPR001650 , IPR003100 , IPR005034 , IPR013103 , IPR014720 , IPR027417 , IPR036085 , IPR036389 , IPR038248 , IPR043502
- PANTHER: PTHR14950 , PTHR14950:SF46
- SUPFAM: SSF101690 , SSF52540 , SSF54768 , SSF56672 , SSF69065
- PROSITE: PS00517 , PS50137 , PS50142 , PS50821 , PS51194 , PS51327
- Gene3D: 1.10.1520.10 , 2.170.260.10 , 3.30.160.20 , 3.30.160.380 , 3.40.50.300
- CDD: cd00593 , cd09272 , cd18802
- eggNOG: KOG0017 , KOG0701
- STRING: 29760.F6H2U0
- HOGENOM: CLU_234950_0_0_1
Sequences
CDS Sequence
- >VIT_04s0008g02170
ATGAAGTGCCTCTTCTTGGGATATTCCAGACTTCAGAAGGGTTATCGTTGTTATTCCCTTGAGACTCATCGGTACTTTATCTCCGCTGATGTCACCTTCTTTGAGGACTCACCATTCTTTTCCACCACTTCTGAGTCTCTTCCTGTTTCTGAAGTCTTGCCCATTCCCATTGTCTCTCCACCTGATGCTATGCCCCCTCGACCACTTCAGGTTTATCATCGTCGCCCTCGTGTCGTTGCTCCTCTCCCTTTTCCTGAGGCACCTGCTGACTCACTTCCTATCCCTTCGGCTTCACCTGCCCCGGCTCTGCCTTCTCCTAATGACTTACCTATTGCTGTTCGGAAAGGTACTCGCTCTACTCGTAATCCTCATCCTATTTACAATTTTTTGAGTTATCATCGATTATCTTCACCCTATTCTGCTTTTGTTTATGCTATATCCTCTGTTTCTTTTCCAAAGAGCACCCATGAAGCTCTTTCCCATCCAGGCTGGAGACAGGCAATGGTGGATGAAATGGCTGCTCTGCACTCTAATGGCACTTGGGATCTTGTTGTTTTACCCTCTGGTAAATCTACAGTTGGTTGTCGTTGGGTCTATGCAGTTAAGGTTGGTCCTGATGGTCAGGTTGATCGCCTTAAGGCCCGTTTAGTTGCTAAAGGCTATACTCAAGTTTATGGTTCTGATTATGGTGACACATTCTCCCCTGTTGCCAAGATTGCTTCTGTCCGCTTGCTTCTCTCCATGGCTGCTATGTGTTCTTGGCCTCTTTATCAGTTGGATATTAAAAATGCCTTTCTTCATGGTGATCTTGCCGAGGAAGTTTATATGGAGCAACCTCCTGGTTTTGTTGCTCAGGGGGAGTCTGGTTTAGTGTGCAGGTTACGCCGTTCTCTATATGGCTTGAAACAATCTCCTCGAGCATGGTTTAGCCGTTTTAGTTCTGTTGTTCAAGAGTTTGGCATGCTTCGTAGTACAGCAGACCATTCAGTTTTTTATCATCATAACTCCTTGGGGCAGTGTATTTATCTGGTTGTTTATGTGGACGACATCGTCATTACAGGCAGTGATCAGGATGGTATTCAGAAACTAAAGCAACATCTTTTTACCCACTTTCAGACCAAAGACTTGGGGAAACTCAAGTATTTCTTGGGAATTGAGATAGCTCAATCCAGTTCTGGTGTGGTCCTTTCCCAAAGGAAGTATGCTTTAGACATCCTGGAAGAAACCGGTATGTTAGACTGTAAACCGGTAGACACACCTATGGATCCGAATGTCAAACTTGTACCAGGACAGGGGGAGCCTTTAGGAGACCCCGGGAGATATCGACGACTCGTAGATGCAGATTGGGCTGGCTCACCCACAGATAGACGTTCCACTTCAGGGTACTGTGTTTTTATTGGAGGTAATCTAATATCTTGGAAGAGTAAGAAACAAGATGTAGTGGCCAGATCTAGCGCTGAAGCCGAGTATCGAGCTATGGCTTTGGCAACATGTGAACTCATATGGTTGAGACATCTTCTTCAGGAGTTGAGATTTGGAAAGGATGAACAGATGAAACTCATCTGTGATAACCAGGCCGCATTACATATTGCATCCAATCCAGTCTTTCATGAAAGGACCAAGCATATTGAAGTTGACTGTCATTTCATTAGAGAGAAGATCGCATCAGGATGTGTTGCTACAAGTTTTGTCAATTCAAATGATCAACTAGCAGACATCTTCACTAAATCTCTCAGAGGTCCTAGGATTAAATATATTTGTAACAAGCTTGGTGCATATGATGCTGTTAAAGTCTGTATAGAGAATGTTTCAAATGCTCAAGAGGAATTTGAATTTTATAGACAAAGTTCTTCCCAGTGTAAATGTTTTCTTCAGGAGGTTTTGGGCATCATTGGGGGATATCTGCCACATGGTGATGGAAATTATTTGAATTCTGAATCTGACATTCTAAAGGCAGTAGATAAGGGTTATATAACTCCCAAATTACATGAACTCCTTCAACTTTTCCAATCCTTTGGAGTAGCTAGGAAAGTATTGTGCCTCATTTTTGTAGAGAGAATCATAACAGCTAAAGTAATCGAAAGATTCATTAAGAAAATTATATACTTATCACATTTCACGGTTTCATATTTAACTGGGAGTAATTCATCGGTCGATGCACTTGCACCAAAGGCGCAAAGGGAAACCTTGGAATCATTTCGCTCTGGGAAGGTTAACCTATTATTTGCAACTGATGTGGTTGAGGAGGGAATTCATGTGCCAAACTGCTCCTGTGTTATTCGTTTTGACCTACCGAAGACTGTTCGTAGTTATGTCCAATCACGAGGACGAGCTCGGCAAAGTGATTCCCAATTTATCATCATGCTTGAGAGGGGAAACACAGAGCAAAGGGATCAATTGTTTGATATCATCAGGAGTGAGTATTCCATGACGGATACTGCTACAAATAGAGACCCTGATGGGTACACCTTGAAAGCATACACTATTGAGGAAATGGATTCATATTTTGTGGATTCGACTGGTGCATCTGTCACTGCAGATTCTAGTGTCAGTCTTATTCATCGATATTGTGAAAAGCTTCCAGGAGATAAGTACTTCACTCCTAAGCCATTTTTTCATTTCACATATTTGGAAGGGATGTATGAGTGTAAATTAACATTACCTCCTAATGCGGCTTTTCAAACAATTATTGGTCCTGGGAACAAGAATTCTCATTTATCAAAACAGCTAGTATGCTTGGAAGCATGTAAGAAGCTTCATCAAATGGGGGCTCTCGATGATCATCTTCTCCCTTATGTTGAAGAGCCTTCAGAAAATGATATCATTGTAAAAAGCAAAGGATCAGCTGCAGGTGCAGGAACAACAAAAAGGAAAGAATTACATGGGACAACTCAAACTTGTGCATTATCTGGAACTTGGGGAGATAAAATTGATGGGGCCATTTTCCAGGCCTATAAAATAGATTTCTCCTGCAATATTGTTAATGAGCTGTATTCGGGATTTGTTCTTTTGATTGAATCAAAACTGGATGATGATGTGGGAAATATTGAAATGGAACTCTACTTGATCTCCAAGTTTGTCAGAACATCTGTTTCTTCATGCGGTCAAGTGTCTCTAGATGCAGAACAGGTGATGAAAGCAATGCGCTTCCACGAATTGTTCTTTAACAGTCTGTTTGGGAGATTGTTTATTGGATCAAAATCATCTGGAGTGCGAAGAGAATTTTTACTTAACACACAACAAAAATCATTATGGAGCTCATCAAACATGTATTTGCTGTTACCAATTGAGTCATCAAACATTCCAAGTGATGAATCTTGGAGAATAAATTGGCCAGGAATCAACTCTTGTGCTTCTGTTGTAGAATTTTTAGAAAAACGTTCTCAGTTAAGTACTGGAAATATGAATGATGATACTGGAAATCCATCACCCTGTAGCACTGGCTTAGTTGAGACAGAATGCAAAAGCATCAGTACTGTCCACTTAGCTAATAATTCAGTTCACGTGAACAACCTTAAAAATATGGTGGTTTTGGCTATTCATACAGGAAGAATTTACTCCATTCTAGATGTAGTGATTGACACATCTGCTGAGAGTCCTTTTGATGGAAGTGCTGATGTTAACTCTTCTAATTATACAACCTTTGCTGAGTACTTCAATAACAAGTATGGGATTGTACTAATGTATCCGGGACAGCCTCTGTTGCTGTTAAAGCAAAGTCATAATGCACATAATCTTCTTGTAAACTTTAACGATGAAGGTGGTGAGGCATTGCAAACTGGCCAGAAAATGCTCAACGAGAAGGCTCAAACTCATGTTCATATGCCACCTGAGCTTTTAGTCAGTATTGAAGTACCAATAACTGTCTTAAAATCATCTTACTTACTCCCATCATTGATCCACCGTCTGGAGTCCTTGATGTTAGCTAGCCAGCTTAGAGAAGAGATTGCTTTTACTACTGGCTCTCAGATCTCAAGCTCATTGATTCTGGAAGCAATTACAACTCTTCGATGCTCTGAAAGTTTTTCTATGGAGCGTTTAGAATTGCTTGGGGATTCAGTGTTGAAGTATGCTGTGAGCTGCCACCTCTTTCTCAAATATCCCAAGAAACATGAAGGGCAATTATCTGCTAGACGCTCATGGGTTGTTTGTAACTCAACCCTTCATAAATTGGGGACTGATCGCAGTTTACAGGGCTATATAAGAGATGGTGCATTTGATCCTCGTCGTTGGGTTGCTCCAGGACAGCGTTCTATACGCCCTGTTCCTTGTTCATGTGGGGTGGATGCATTGGAGGTGCCTTTAGACGGAAAATTTCAAACTGAAGACACAAAAATTGTGGTTGGAAAATCCTGTGATAGGGGTCATAGATGGATGGGCTCAAAAACGATAGCCGATTGTGTTGAAGCCCTTATAGGAGCATACTATGTTGGTGGTGGATTAAATGCTGCTCTTCATTTGATGAAATGGTTTGGTATTGATGTTGAACTTGAGCCCTCATTGGTAGATGAAGCCATTGCCACTGCATCTCTCCGAACTTACATTCCTAAAGCTAATGAGATTGAAATCCTAGAGTCTAAGATTGGGTATGAATTCTCTGTCAAGGGTCTGTTACTGGAGGCTATAACACATGCAACTGAGCAAGAACTTGGAGTTGGCTACTGCTACCAGCGGCTTGAATTTCTTGGCGACTCTGTGCTGGATGTGCTTATTACATGGCATCTCTATCAGAGCCACAGAGATATTGATCCAGGGGAGTTGACTGACCTGCGATCAGCTTCTGTTAATAATGAAAGTTTTGCCCAAGTTGCTGTAAGACGGAACCTTCAGCAGCATCTTCAACATTGCTCTGGTTTACTTTTAGGTCAAATAAAAGAGTATGCGAAGTATCTTTCTGGTTCTGATGATGTCCCCAATCCACTCCAGAGCACAAAAGGTCCTAAAGCTCTTGGAGACTTGGTGGAGAGTATAGCAGGAGCAATACTAATTGATACCAAGCTTAATCTCAATGAAGTGTGGAGAATCTTTAAACCACTTTTATCTCCAATAGTAACCCCTGATAAACTTGAGCTGCCTCCACTGCGTGAACTGAATGAATTATGTGATTCTCTCGGCTATTTTATAAAAGAAAAATGTACGAATAAGGGAGAACTGGTGCATGCGGAGCTTAGATTACAGATGATTGATGTCCTATTGGTTGGTGAGGGATGTGGCCGGAACAAAAAGGCTGCAAAAGGTCAAGCTGCTGCTCAATTGTTGAAAAACCTGGAGAAAAGAGGAATTTCATACTCCCGGAGTAATTCCAAGAGGAGAAAACAGGGTGCAGACTTGGTTGGTGTTTCATCGTCCCTGAACATGGGTGGTGATGCATGTGGACAATCCAATAATGAAGATTCTTCAGAGTTGATAAAATTCCACAAAAAACAGAAGACAACAGGAATGCAGTTGTGTACAAGAACTTCCATTGCCAACAACTGTCTCGAGAATGCTTGCAAACCGAAGCTCGACACCCCAGTCATTAAATCAATAAACATGAAGAAAGGAGGACCCCGCTCCTCTCTTTATGAATTATGCAAACGACTACAGTGGCCAATGCCCAGTTTTGAATCAAAAGAACAAAGATCAAGATTCCCGATTATATTTGGTGAAGGCTCTGAAAGAAGGGAAGGCTTTAACAGTTTCATATCCAGCATCTCCTTGCATATACCCAATTGCGGTGTCATGGAATGCCGGGGTGATCATAGAGCAGACAAGAAGAGTTCACTCGACTCTGCAGCCCTTGTCATGCTTCATGAGCTTCAACGACGGGGGAAGCTCATCATCCATGATTAA
Protein Sequence
- >VIT_04s0008g02170
MKCLFLGYSRLQKGYRCYSLETHRYFISADVTFFEDSPFFSTTSESLPVSEVLPIPIVSPPDAMPPRPLQVYHRRPRVVAPLPFPEAPADSLPIPSASPAPALPSPNDLPIAVRKGTRSTRNPHPIYNFLSYHRLSSPYSAFVYAISSVSFPKSTHEALSHPGWRQAMVDEMAALHSNGTWDLVVLPSGKSTVGCRWVYAVKVGPDGQVDRLKARLVAKGYTQVYGSDYGDTFSPVAKIASVRLLLSMAAMCSWPLYQLDIKNAFLHGDLAEEVYMEQPPGFVAQGESGLVCRLRRSLYGLKQSPRAWFSRFSSVVQEFGMLRSTADHSVFYHHNSLGQCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTKDLGKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGMLDCKPVDTPMDPNVKLVPGQGEPLGDPGRYRRLVDADWAGSPTDRRSTSGYCVFIGGNLISWKSKKQDVVARSSAEAEYRAMALATCELIWLRHLLQELRFGKDEQMKLICDNQAALHIASNPVFHERTKHIEVDCHFIREKIASGCVATSFVNSNDQLADIFTKSLRGPRIKYICNKLGAYDAVKVCIENVSNAQEEFEFYRQSSSQCKCFLQEVLGIIGGYLPHGDGNYLNSESDILKAVDKGYITPKLHELLQLFQSFGVARKVLCLIFVERIITAKVIERFIKKIIYLSHFTVSYLTGSNSSVDALAPKAQRETLESFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRARQSDSQFIIMLERGNTEQRDQLFDIIRSEYSMTDTATNRDPDGYTLKAYTIEEMDSYFVDSTGASVTADSSVSLIHRYCEKLPGDKYFTPKPFFHFTYLEGMYECKLTLPPNAAFQTIIGPGNKNSHLSKQLVCLEACKKLHQMGALDDHLLPYVEEPSENDIIVKSKGSAAGAGTTKRKELHGTTQTCALSGTWGDKIDGAIFQAYKIDFSCNIVNELYSGFVLLIESKLDDDVGNIEMELYLISKFVRTSVSSCGQVSLDAEQVMKAMRFHELFFNSLFGRLFIGSKSSGVRREFLLNTQQKSLWSSSNMYLLLPIESSNIPSDESWRINWPGINSCASVVEFLEKRSQLSTGNMNDDTGNPSPCSTGLVETECKSISTVHLANNSVHVNNLKNMVVLAIHTGRIYSILDVVIDTSAESPFDGSADVNSSNYTTFAEYFNNKYGIVLMYPGQPLLLLKQSHNAHNLLVNFNDEGGEALQTGQKMLNEKAQTHVHMPPELLVSIEVPITVLKSSYLLPSLIHRLESLMLASQLREEIAFTTGSQISSSLILEAITTLRCSESFSMERLELLGDSVLKYAVSCHLFLKYPKKHEGQLSARRSWVVCNSTLHKLGTDRSLQGYIRDGAFDPRRWVAPGQRSIRPVPCSCGVDALEVPLDGKFQTEDTKIVVGKSCDRGHRWMGSKTIADCVEALIGAYYVGGGLNAALHLMKWFGIDVELEPSLVDEAIATASLRTYIPKANEIEILESKIGYEFSVKGLLLEAITHATEQELGVGYCYQRLEFLGDSVLDVLITWHLYQSHRDIDPGELTDLRSASVNNESFAQVAVRRNLQQHLQHCSGLLLGQIKEYAKYLSGSDDVPNPLQSTKGPKALGDLVESIAGAILIDTKLNLNEVWRIFKPLLSPIVTPDKLELPPLRELNELCDSLGYFIKEKCTNKGELVHAELRLQMIDVLLVGEGCGRNKKAAKGQAAAQLLKNLEKRGISYSRSNSKRRKQGADLVGVSSSLNMGGDACGQSNNEDSSELIKFHKKQKTTGMQLCTRTSIANNCLENACKPKLDTPVIKSINMKKGGPRSSLYELCKRLQWPMPSFESKEQRSRFPIIFGEGSERREGFNSFISSISLHIPNCGVMECRGDHRADKKSSLDSAALVMLHELQRRGKLIIHD