Information report for TraesSYM4D03G02560550
Gene Details
|
|
Functional Annotation
- Encodes a ubiquitin-specific protease which catalyzes deubiquitination of histone H2B and is required for heterochromatin silencing.Loss of function mutations display autonomous endosperm development and embryo arrest. Loss of function also results in an increase in expression of the PcG complex target gene PHE1.
Homologous
- Triticum aestivum: TraesCS4D02G266600, TraesCS4A02G038800
Gene Resources
- Pfam: PF00443
- UniProt: A0A3B6JNN3
- RefSeq: XP_044376344.1 , XP_044376345.1
- AlphaFoldDB: A0A3B6JNN3
- InterPro: IPR000626 , IPR001394 , IPR006615 , IPR018200 , IPR028889 , IPR029071 , IPR033841 , IPR035927 , IPR038765 , IPR044743 , IPR050164
- PANTHER: PTHR24006 , PTHR24006:SF722
- SUPFAM: SSF143791 , SSF54001 , SSF54236
- PROSITE: PS00972 , PS00973 , PS50053 , PS50235 , PS51283
- Gene3D: 3.10.20.90 , 3.30.2230.10 , 3.90.70.10
- SMR: A0A3B6JNN3
- CDD: cd01795 , cd02668
- STRING: 4565.A0A3B6JNN3
Sequences
CDS Sequence
- >TraesSYM4D03G02560550
ATGAGCAGGCACAACACCCGCAATAAGAACAAGAGGCCACGCGCTGATGAGTCTGCGAGCCCGTCTTATGCCGCTCTCAAGAGGATACATTCCACTGGTGCCATCACGCAAGATGATATTAGGCAACTTTACAGCGTGTGGAAGCCGGTTTGCCAGGGCTGCCATGGGAACACCAAGGACTCACCCAATTGTTTCTGCGGATTGATCCCCACCACCGGTGGGGCGAGGAAGACTGGCCTCTGGCAGAAAAATGGCGAGCATGTCGGTAGCCTCGGCCCTGACCCATCCAAGGACCTCCGTGCTTCCACCGAGACGCCTGCTGGATTGACTAATCTGGGCGCGACATGTTATGCTAACAGCATACTTCAGTGCCTTTATATGAACACTTCCTTCCGTTCAGGCATTTTCTCGCTAGAGCCAGACATCTTGAAGAAGCAACCTGTTCTCGATCAGCTGGCTCGATTATTTGCGCAGCTACACTCCAGCAAAATGGCTTTCATTGATTCAGCACCTTTCATCAAGACCTTGGAACTAGACAACGGTGTCCAGCAGGACAGTCACGAATTTCTCACCTTGTTTTTGTCTCTGCTCGAGCGTTCGTTAAGTTACTCCAAGGTCACTGTTGCGAAAACTATTGTGCAAGATTTATTTCGTGGAAGTGTGTCGCATGTGACTCGGTGTTCATCATGTGGAAGGGATTCTGAAGCATCTTCAAAAATGGAAGACTTCTATGAACTGGAACTGAATATTAAAGGTTTAAGTAATTTAGAGGAAAGTCTGGATGACTATTTGAGTGTGGAGGCACTGAATGGGGAGAACCAATATTCCTGCGAGTCATGTCAGAAAAGGGTAGATGCCACCCGTTGTATAAAACTTCGCTCGCTTCCTCCTGTTGTTAATTTTCAGCTGAAGCGATATGTATTCCTACCAAAGACAACAACGAAGAAAAAGATTTCTTCATCATTCAGTTTTCCGGGACAGCTAGATATGGGGAAGCGGTTGTCGGATCCTTCATCCAATTACATTTATGACCTGGCTGCTATTTTGATTCATAAGGGTAGTGCTGCTAATAGTGGTCACTATGTGGCACATATAAAGGATGAAAGCAATGGTCACTGGTGGGAGTTTGATGATGAGTGTGTATCCAGCCTTGGTTTTCACCCTTTTGGTGAAAAACCAGGCAAGTCATCTGATAAAGCGGATCAGAAATCTGAAGGTACTTCTACCGAAGGTTCTGTGGCAAATGGTAATAACAGTAGCCATCATGAGGCTGCACTGACTTCTAATATGGGAGAGATGTTCTCTTCCACTGATGCTTACATGCTAATGTACAAACGATCGAGCAAGGATGAAAATGGTATTAAAAGCAATAATATTGTGGAAGCCAGTAATAGTTCACTTCCACGCCATCTGATGGATGAGATTGATGCATTGAATGCATCATGTGTAAACGAATGTGGCGAGTACCTAAGTAAAAAAGATAACCTTTTGGCTTCCATACAAGAAAGGCGCCAAGAAGTAAAATCTGTTATTACAGAAGCACCTGCTACTCCAGACGATGATTCATATTTTTGGATTTCACTAGACTGGCTTCGCCAATGGGCGGATAATGCTACCCCTCCCTCTTCCATTGACAACAGTCCAATTCAGTGTGAACATGGAAAAGTTCCAGCATCTAAAGTCACATCCATGAAGCGGTTATCTGCTAAAGCTTGGGAGAAGCTACTTTCCAAATACGGAGGAGGACCAACACTCCGCAAGGATGATGTTTGCAAGGAGTGTCTCAAGGATGTAGCAAAAACTGCAGTTTCTGCTGATGTCTATCGTGATCGGAAAGCATCGTTAAAGAATCTTGCAGAAGCTGCACTTGCTGGAAGTATTCCAGAAGGTCCTTCTTACTTTATTTCGAAGGCATGGTTGTCCCATTGGCTGCGAAGAAAAAATGTGGATATCACTTTTGATGCTGATAAGGGACCAACAAGTGCTCTAAGATGCAGCCATGGGAATCTTCTTCCAGAGCACGCTTCTGGGGCAAAGCGGGTATCTGTGCCAGAGAGCCTATGGCTATTTCTCTATGAAACCATTGCAAGGGAAGCTGATGATGTTGTGACTTTTCCGTCAGATACTCAACCATGCGAGATCTGTGACCACAAATTGTCAGCTGTTGCTTCTGTTGAGGATCGTCTTAGAGCGGTGAAACTGAAGCAACGACAGAGCCATGAAAAGTTAATCTCTGGGAAAGGCTTTGCACTTAATCCTGGACAAAAATATTATTTGGTTCCTTCGTCGTGGTTGTCAGAATGGAGAGCTTACATTACAGCGACTGGAAAAAATGTTTCGTCGTTACCAGAACCTCAAAGTCTTGAAGTTGCTATAAATTCACTTAAATGTGAAAAGCATTCTAGATTGTTGCAAAGGCCTTTGGATATAGTTTACAAGCGTGGGGGCATCACTCAGAAAACATCGAATACTGATGGGTTAGCAATCATCTCAGAATCCGACTGGCAATCATTCTCTGAGGAGTGGAACGTGGAACATGCAGATGGCGCATGTGCTGAAATTGTTTTTAGTAAGAGCTCAGAGGATAAACCGCACGAGTCGTCTGAAGCAATGGTAATTTCAGATAAAGATCCGGACCAGTCTATTAATGGTGCAAATGATGACTTGGAGGACTGTAGACCCTATGTCAGAACTGATCCTGAGGTTTGTGAAGAATGTATTGGAGAAAGAGAGAGCTGTGCATTGGTGGAGAAACTCAATTACCAGAACGAAGATATCCATGTTTATCTTGTGCGTGGGAAAGAAGCACCAAAGTCAATTAGGGAGGCATCTGCAGCTCTTCCTGTTCCAGATCGCCGGACTTCAAAGCGTTCTCGGAGAACAACCACAGGGAACTCAATCAGTTTGAAAGTCTCTGGTTCTACAACCGTCTATCAGTTGAAACTCATGATATGGGAATCTTTAGGGATTGTGAAGGAGAATCAGAAGCTTCATAAAGGCCCTCTCGAGATTGAAGAGGATTTTGCGACTCTTGCTGATAAGTGCATTTTCCCTGGGGATGTTTTGTGGGTTAAAGATTCTGAATTGTTTGAGGACCGTGATATAGCAGATGAAATTTCAGAGCCGAAGGCTGATGCACTACCTGCTGAGGAAGGCTTTCGTGGTACACTATTGACATCAAGTGTATCAGCTCAGCTTTGTCAGGACATAGTATCGAGTGAATGA
Protein Sequence
- >TraesSYM4D03G02560550
MSRHNTRNKNKRPRADESASPSYAALKRIHSTGAITQDDIRQLYSVWKPVCQGCHGNTKDSPNCFCGLIPTTGGARKTGLWQKNGEHVGSLGPDPSKDLRASTETPAGLTNLGATCYANSILQCLYMNTSFRSGIFSLEPDILKKQPVLDQLARLFAQLHSSKMAFIDSAPFIKTLELDNGVQQDSHEFLTLFLSLLERSLSYSKVTVAKTIVQDLFRGSVSHVTRCSSCGRDSEASSKMEDFYELELNIKGLSNLEESLDDYLSVEALNGENQYSCESCQKRVDATRCIKLRSLPPVVNFQLKRYVFLPKTTTKKKISSSFSFPGQLDMGKRLSDPSSNYIYDLAAILIHKGSAANSGHYVAHIKDESNGHWWEFDDECVSSLGFHPFGEKPGKSSDKADQKSEGTSTEGSVANGNNSSHHEAALTSNMGEMFSSTDAYMLMYKRSSKDENGIKSNNIVEASNSSLPRHLMDEIDALNASCVNECGEYLSKKDNLLASIQERRQEVKSVITEAPATPDDDSYFWISLDWLRQWADNATPPSSIDNSPIQCEHGKVPASKVTSMKRLSAKAWEKLLSKYGGGPTLRKDDVCKECLKDVAKTAVSADVYRDRKASLKNLAEAALAGSIPEGPSYFISKAWLSHWLRRKNVDITFDADKGPTSALRCSHGNLLPEHASGAKRVSVPESLWLFLYETIAREADDVVTFPSDTQPCEICDHKLSAVASVEDRLRAVKLKQRQSHEKLISGKGFALNPGQKYYLVPSSWLSEWRAYITATGKNVSSLPEPQSLEVAINSLKCEKHSRLLQRPLDIVYKRGGITQKTSNTDGLAIISESDWQSFSEEWNVEHADGACAEIVFSKSSEDKPHESSEAMVISDKDPDQSINGANDDLEDCRPYVRTDPEVCEECIGERESCALVEKLNYQNEDIHVYLVRGKEAPKSIREASAALPVPDRRTSKRSRRTTTGNSISLKVSGSTTVYQLKLMIWESLGIVKENQKLHKGPLEIEEDFATLADKCIFPGDVLWVKDSELFEDRDIADEISEPKADALPAEEGFRGTLLTSSVSAQLCQDIVSSE