Information report for TraesSYM4A03G02042210
Gene Details
|
|
Functional Annotation
- Encodes a ubiquitin-specific protease which catalyzes deubiquitination of histone H2B and is required for heterochromatin silencing.Loss of function mutations display autonomous endosperm development and embryo arrest. Loss of function also results in an increase in expression of the PcG complex target gene PHE1.
Homologous
- Triticum aestivum: TraesCS4A02G038800, TraesCS4D02G266600
Gene Resources
- Pfam: PF00443
- UniProt: A0A9R0VVQ6
- EMBL: LT934117
- InterPro: IPR000626 , IPR001394 , IPR006615 , IPR018200 , IPR028889 , IPR029071 , IPR033841 , IPR035927 , IPR038765 , IPR044743 , IPR050164
- PANTHER: PTHR24006 , PTHR24006:SF722
- SUPFAM: SSF143791 , SSF54001 , SSF54236
- PROSITE: PS00972 , PS00973 , PS50053 , PS50235 , PS51283
- Gene3D: 3.10.20.90 , 3.30.2230.10 , 3.90.70.10
- SMR: A0A9R0VVQ6
- CDD: cd01795 , cd02668
Sequences
CDS Sequence
- >TraesSYM4A03G02042210
ATGAGCAGGCACAACACCCGCAATAAGAACAAGAGGCCACGCGCCGATGAGTCTGCGAGCCCGTCTTATGCTGCTCTCAAGAGGATACATTCCACTGGCGCCATCACGCAAGATGATATTAGGCAACTTTACAGCGTGTGGAAGCCGGTTTGCCAGGGCTGCCATGGGAACACCAAGGACTCACCCAATTGTTTCTGCGGGTTGATCCCCACCACCGGTGGGACGAGGAAGACTGGCCTCTGGCAGAAAAATGGCGAGCATGTCGGTAGCCTCGGCCCTGACCCATCCAAGGACCTCCGTGCTTCCACTGAGACGCCTGCTGGATTGACTAATCTGGGCGCGACATGTTATGCTAACAGCATACTTCAGTGCCTCTATATGAACACTTCCTTCCGTTCAGGCATTTTCTCGCTAGAGCCAGACATCTTGAAGAAGCAACCTGTTCTCGATCAGCTGGCTCGATTATTTGCGCAGCTACACTCCAGCAAAATGGCTTTCATTGATTCAGCACCTTTCATCAAGACCTTGGAACTAGACAACGGTGTCCAGCAGGACAGTCACGAATTTCTCACCTTGTTTTTGTCTCTGCTCGAGCGTTCGTTAAGTTACTCCAAGGTCGCTGTTGCAAAAACTATTGTGCAAGATTTATTTCGTGGAAGTGTGTCGCATGTGACTCGGTGTTCATCATGTGGAAGGGATTCTGAAGCATCTTCAAAAATGGAAGACTTCTATGAACTGGAACTGAATATTAAAGGTTTAAGTAATTTAGAGGAAAGTCTGGATGACTATTTGAGCGTGGAGGCACTGAATGGGGAGAACCAATATTCCTGCGAGTCATGTCAGAAAAGGGTAGACGCCACCCGTTGTATAAAACTTCGCTCGCTTCCTCCTGTTGTTAATTTTCAGCTGAAGCGATATGTATTCCTACCAAAGACAACAACGAAGAAAAAGATTTCTTCATCATTCAGTTTTCCGGGACAGCTAGATATGGGGAAGCGGTTGTCGGATCCTTCATCCAATTACATTTATGACCTGGCTGCTATTTTGATTCATAAGGGTAGTGCTGCTAATAGTGGTCACTATGTGGCACATATAAAGGATGAAAGCAATGGTCACTGGTGGGAGTTTGATGATGAGTGTGTATCCAGCCTTGGTTTTCACCCTTTTGGTGAAAAACCAGGCAAGTCATCTGATAAAGCGGATCGGAAATCTGAAGGTACTTCTACCGAAGGTTCTGTGGCAAATGGTAATAACAGTAGCCATCATGAGGCTGCACCGACTTCTAATATGGGAGAGATGTTCTCTTCCACTGATGCTTACATGCTAATGTACAAACGTTCGAGCAAGGATGAAAATGGTATTAAAAGCAATAATATTGTGGAAGCCAGTAATAGTTCACTTCCACGCCATCTGATGGATGAGATTGATGCTTTGAATGCATCATGTGTAAACGAATGTGGCGAGTACCTAAGTAAAAAAGATAACCTTTTGGCTTCCATACAAGAAAGGCGCCAAGAAGTAAAATCTGTTATTACAGAAGCACCTGCTACTCCAGACGATGATTCATATTTTTGGATTTCACTAGACTGGCTTCGCCAATGGGCGGATAATGCTACCCCTCCCTCTTCCATTGACAACATTCCAATTCAGTGTGAACATGGAAAAGTTCCAGCATCTAAAGTCACATCCATGAAGCGGTTATCGGCTAAAGCTTGGGAGAAGCTACTTTCCAAATACGGAGGAGGACCAACACTCAGCAAGGATGATGTTTGCAAGGAGTGTCTCAAGGATGTAGCAAAAACTGCAGTTTCTGCTGATGTCTATCGTGATAGGAAAGCATCGTTAAAGAATCTTGCAGAAGCTGCACTTGCTGGAAGTATTCCAGAAGGTCCTTCTTACTTTATTTCGAAGACATGGTTGTCCCATTGGCTGCGAAGAAAAAATGTGGATATCACTTTTGATGCTGATAAGGGACCAACAAGTGCTCTAAGATGCAGCCATGGGAATCTTCTTCCAGAGCACGCTTCTGGGGCAAAGCGGGTATCTGTGCCAGAGAGCCTATGGCTATTTCTCTATGAAACCATCGCAAAGGAAGCTGATGATATTGTGACTTTTCCGTCAGATACTCAACCATGCGAGATCTGTGACCACAAATTGTCAGCTGTTGCTTCTGTTGAGGATAGTCTTAGAGCGGTGAAACTGAAGCAACGACAGAGCCATGAAAAGTTAATCTCTGGGAAAGGCTTTGCACTTAATCCTGGACAAAAATATTATTTGGTTCCTTCGTCGTGGTTGTCAGAATGGAGAGCTTACATTACAGCGACTGGAAAAAATGTTTCGTCGTTACCAGAACCTCAAAGTCTTGAAGTTGCTATAAATTCACTTAAATGTGAAAAGCATTCTAGATTGTTGCAAAGGCCTTTGGATATAGTTTACAAGCGTGGGGGCATCACCCAGAAAACATCGAATACTGATGGGTTAGCAATCATCTCAGAATCCGACTGGCAATCATTCTCTGAGGAGTGGAACGTTGCACATGCAGATGGCGCATGTGCTGAAATTGTTTTTAGCAAGAGCTCAGAGGATAAACCGCACGAGTCATCTGAAGCAATGGTAATATTGGATAAAGATCCGGACCAGTTTATTAATGGTGCAAATGGTGACTCGGAGGACTGTAGACCCTATGTCAGAACTGATCCTGAGGTTTGTGAAGAATGTATTGGAGAAAGAGAGAGCTGTGCATTGGTGGAGAAACTCAATTACCAGAACGAAGATATCCATGTTTATCTTGTGCGTGGGAAAGAAGCACCAAAGTCAATTAGGGAGGCATCTGCAGCTCTTCCTGTTCCAGATCGCCGGACTTCAAAGCGTTCTCGGAGAACAACCACAGGGAACTCAATCAGTTTGAAAGTCTCTGGTTCTACAACCGTCTATCAGTTGAAACTCATGATATGGGAATCTTTAGGGATTGTGAAGGAGAATCAGAAGCTTCATAAAGGCCCTCTTGAGATCGAAGAGGATTTTGCGACTCTTGCTGATAAGTGCATTTTCCCTGGGGATGTTTTGTGGGTTAAAGATTCTGAATTGTTTGAGGACCGTGATATAGCAGATGAAATTTCAGAGCCGAAGGCTGATGCACTACCTGCTGAGGAAGGCTTTCGTGGTACACTATTGACATCAAGTGTATCAGCTCAGCTTTGTCAGGACATAGTATCGAGTGAATGA
Protein Sequence
- >TraesSYM4A03G02042210
MSRHNTRNKNKRPRADESASPSYAALKRIHSTGAITQDDIRQLYSVWKPVCQGCHGNTKDSPNCFCGLIPTTGGTRKTGLWQKNGEHVGSLGPDPSKDLRASTETPAGLTNLGATCYANSILQCLYMNTSFRSGIFSLEPDILKKQPVLDQLARLFAQLHSSKMAFIDSAPFIKTLELDNGVQQDSHEFLTLFLSLLERSLSYSKVAVAKTIVQDLFRGSVSHVTRCSSCGRDSEASSKMEDFYELELNIKGLSNLEESLDDYLSVEALNGENQYSCESCQKRVDATRCIKLRSLPPVVNFQLKRYVFLPKTTTKKKISSSFSFPGQLDMGKRLSDPSSNYIYDLAAILIHKGSAANSGHYVAHIKDESNGHWWEFDDECVSSLGFHPFGEKPGKSSDKADRKSEGTSTEGSVANGNNSSHHEAAPTSNMGEMFSSTDAYMLMYKRSSKDENGIKSNNIVEASNSSLPRHLMDEIDALNASCVNECGEYLSKKDNLLASIQERRQEVKSVITEAPATPDDDSYFWISLDWLRQWADNATPPSSIDNIPIQCEHGKVPASKVTSMKRLSAKAWEKLLSKYGGGPTLSKDDVCKECLKDVAKTAVSADVYRDRKASLKNLAEAALAGSIPEGPSYFISKTWLSHWLRRKNVDITFDADKGPTSALRCSHGNLLPEHASGAKRVSVPESLWLFLYETIAKEADDIVTFPSDTQPCEICDHKLSAVASVEDSLRAVKLKQRQSHEKLISGKGFALNPGQKYYLVPSSWLSEWRAYITATGKNVSSLPEPQSLEVAINSLKCEKHSRLLQRPLDIVYKRGGITQKTSNTDGLAIISESDWQSFSEEWNVAHADGACAEIVFSKSSEDKPHESSEAMVILDKDPDQFINGANGDSEDCRPYVRTDPEVCEECIGERESCALVEKLNYQNEDIHVYLVRGKEAPKSIREASAALPVPDRRTSKRSRRTTTGNSISLKVSGSTTVYQLKLMIWESLGIVKENQKLHKGPLEIEEDFATLADKCIFPGDVLWVKDSELFEDRDIADEISEPKADALPAEEGFRGTLLTSSVSAQLCQDIVSSE