Information report for TraesPAR_scaffold_009847_01G000100
Gene Details
|
|
Functional Annotation
- Encodes the putative catalytic subunit of the DNA polymerase alpha. Interacts with genes involved in chromatin-mediated cellular memory. ICU2 genetically interacts with TERMINAL FLOWER2, the ortholog of HETEROCHROMATIN PROTEIN1 of animals and yeasts, and with the Polycomb group (PcG) gene CURLY LEAF. A number of regulatory genes were derepressed in the icu2-1 mutant, including genes associated with flowering time, floral meristem, and floral organ identity. Mutant has curled, involute leaves and causes early flowering.
Homologous
- Triticum aestivum: TraesCS3D02G373300, TraesCS3A02G380100
Gene Resources
- Pfam: PF12254 PF00136 PF03104 PF08996
- UniProt: A0A9R1K2S5
- EMBL: CM022219
- OMA: RTAQNHE
- InterPro: IPR006133 , IPR006134 , IPR006172 , IPR012337 , IPR015088 , IPR017964 , IPR023211 , IPR024647 , IPR036397 , IPR038256 , IPR042087 , IPR043502 , IPR045846
- PANTHER: PTHR45861 , PTHR45861:SF1
- SUPFAM: SSF53098 , SSF56672
- PROSITE: PS00116
- Gene3D: 1.10.132.60 , 1.10.287.690 , 1.10.3200.20 , 2.40.50.730 , 3.30.420.10 , 3.30.70.2820 , 3.90.1600.10
- OrthoDB: A0A9R1K2S5
- CDD: cd05532 , cd05776
- STRING: 4565.A0A3B6H2E4
Sequences
CDS Sequence
- >TraesPAR_scaffold_009847_01G000100
ATGGACGACGCGCCCGCCGACGCCGCCGGATCCGGCCGCCGCACGCGCACCCGGGGCACCGAGGCGGTGGCGCGCTCCGCGGCGCTGGAGCGCCTCCGCGCCATCCGCGGCGGCGGCGCCCGCTCCGCCGCCGCCGTCCAGGTGCGGATGGAGGACCCGATCTACGACACCGTCGCCGAGGAGGACTACGCCGCCCTCGTCGCCCGCCGCCGCGAGGACGCCGGCGCCTTCATCATCGACGACGACGGCCTCGGCTACGTCGACGACGGCCGCGAGGAGGACTGGACCCACCGCGCCCTCCCGTCCTCCTCCGACGAGGGATCTGGCGGCGAGGATGGCGCCCCCCGCAAGCGGAAGCAGCCGCGCCCTCCCCAGGCGAAGCGTCCGCCCCAGCAGTCCGCTGCGGCGGCGTCCCTCTCCGCCGCCGCCGCGATGATGGGCAAGCAGCGCCTCTCCTCCATGTTCACCTCCTCCGTGTTTAAGAAGCCGGGCAGCGACCGCACCAAGGGCTCGTCGCTGGCCGCGGACAGCATCGTGGACGACGTCATCGCCGAGTTCGCCCCCGACGAGAACGACCGCGAGGAGCGCCGTCGTCGCGTTGGCAGGGTCTCTGCCCCGACACCGACGCCTGCTCCAGTTGCCCAAATTAAGGCAATTCAAGCAGCCGTACATGCTGAAATGGAGGTTAGATCGGATAATGGGTTCGAGCCTGATGTGGTTTCAGACCATGGAAACGATATGGAGGTGGAATTACAGCCAGAGGTGGAATTGAAGCCTGATGTGGAAATGCAACCCAAATTAGAAGCAGCTCCAGGTTCTAGTACTGAATTGGTTGATGAGAATAAGAGCTCGGAGGAACTGAAGCAGGAGGCTAATGGGGAGCTGAAGATAGAGAAGGTGCACCGTTTAAATGCTAAAATTAAGGCAGAGGGCACCAGGAATGGGGATATGTTGAGTGCAACAGCAGGTTGGATGAAGATATGTGGGGAGGGGGAGAATGCAGGAGGCGAGGGAGAGGTGTCTGTTAATGGTAACACTGATGTGGATGAAAGCTCGGAGTTTGAGCTGAAGGATGGAGCACTGCCGTTCTATGTGCTGGATGCATATGAGGAGCCCTTCGATATTAATTCAGGCACAGTCTATTTGTTTGGAAAGGTCGTAATAGGCAAGCGGTTCCATAGTTGTTGTGTTGTTGTAAAAAATATGCAAAGGTGCATATATGCAATCCCAAGCAGTTCGGTATTCCCAAGGGACACAATATCAAGGATAGAGAAGAACTCCACAAGTTCTGATGCTTCGCTATCACTTCGAGCAACTTTACATGAGTTGTCATCTGGACTAAAGAGTGAAGTAGCTGAGAAGTTGTCTGACCTCAATGTTTCAAATTTTGTGATGACTCCAGTCAAGAGGAACTATGCATTTGAGAGGACTGATGTACCAATCGGTGAGCAGTATGTCCTGAAAATCAATTACCCATACAAGGATCCTGCGGTACCAGCCGACCTCAGAGGTGACCATTTCCATGCGTTACTTGGGACAAACAATAGTGCACTTGAACTGTTTCTCATCAAAAGGAAGATCAAGGGTCCTTCATGGCTATCGATTTCTAAATTTGTGGCATGTCCATCTACTCAGCGGGTCAGCTGGTGTAAATTTGAAGTTACAGTCGACTCCCCAAAAGACATTTCTGTTTTGATGACAAGTAACACACTGGAAGTCCCCCCAGTTGTAGTTGCGGCTGTTAATCTTAAAACTATCATAAATGAGAAACACAACGTGCATGAGATTGTGTCAGCATCAGTCATATGTTGTCACCAAGTAAAAATTGATACTCCAATGCGTTCTGAAGATTGGCAGAAACGGGGAACTATCAGCCATTTTACTGTTATGCGCAAGCTTGAAGGCAGCATATTTCCTATAGGCCTCACCAAAGAAGCTTCTGATAGGAACCAGAAGGCTGGTAGCAACGTGCTGGCACTAGAGAGCAGTGAACGTGCTTTGTTAAATCGCTTGATGATTGAGCTTAGTAAACTTGATTGTGATGTACTTGTGGGGCACAACATTTCGGGATTCGACCTGGATGTCCTTCTGCACCGTGCTCAGACCTGCAAAGTACCAAGCAGCATGTGGTCCAAAATTGGCCGCCTTAGAAGATCAGTAATGCCCAGGCTTACCAAAGGAAACACACTATATGGTTCTGGGGCAAGTCCAGGAATTATGTCCTGTATTGCTGGCCGTCTCCTCTGTGATACCTACTTATGCTCTCGTGATCTTCTGCGGGAGGTGAGTTATTCTCTGACACAACTTGCAGAGACTCAATTGAAAAAAGACAGAAGAGAGGTTTCGCCACATGATATACCTCCAATGTTCCAATCAGCGGGAACACTTCTAAAGCTGGTTGAGTATGGTGAGACTGATGCATGGCTTTCTTTGGAGCTCATGTTCCACTTGAGTGTTCTCCCGCTTACACGCCAACTGACAAATATTAGTGGTAATCTGTGGGGAAAAACTCTCCAGGGTGCTAGAGCTCAGAGGGTAGAATATCTACTGTTGCATTCATTCCATGCAAAAAAATTCATTATACCAGATAAGTTTGCTGCACGCAATAAGGAGCTGAACTCTGCAAAACGAAAGCTTAATGCTGATACCGAAGGTGGAAATGCTGCTGATGGTGCTGCTGATCCTTCCATTGATGATGAGGTGCATCATGGTGATCAAGGTAAAGCAAGAAAAGGCCCTTCATATGCTGGTGGCTTGGTTTTGGAGCCTAAAAAAGGTCTCTACGACAAGTATATTCTACTTCTGGACTTCAACAGTCTTTATCCTTCAATAATTCAGGAATTCAATATCTGCTTCACCACTGTTGAGCGTTCTTCTGATGGCAATCTCCCTAACCTGCCAACTTCAAAGGCTAGTGGTGTTTTACCTGAGTTGCTGAAGAGCTTGGTGGAGAGGAGAAGAATGGTTAAATCATGGCTCAAAACCGCCTCTGGTCTCAAAAGGCAGCAGTTTGATATTCAACAGCAAGCTTTGAAGCTTACCGCAAACAGTATGTACGGTTGCTTGGGATTTTCTAATTCTAGGTTTTTTGCAAAGCCACTTGCCGAGCTTATTACCCTACAAGGTAGAGAGATCTTGCAAAACACTGTTGATCTGGTTCAGAATAATTTAAACTTGGAGGTTATTTATGGTGACACTGACTCCATAATGATATATACTGGACTGGATGACATCTCCAAGGCAAAAGCAATTGCTGGAAAGGTCATTCAGGAGGTGAACAAGAAGTACCGTTGTCTGGAGATCGATCTTGATGGTGTATACAAAAGGATGTTGCTTCTCAAAAAGAAGAAATATGCTGCCATTAAAGTGGCACTAGATGGTAGTTTACGAGAGAACATTGAGCGCAAGGGACTCGATATGGTCAGGCGTGATTGGAGTATGCTGTCAAAAGAAATTGGTGATTTTTGCCTGAATCAAATCTTGTCTGGAGGGACATGTGATGATGTTATTGAGTCAATACATAACTCTCTCGTCCAGGTCCAAGCACAGATGAAAAGTGGTCAAATAGAGCTTGAAAAATATATCATCACAAAGAGTCTAACGAAAGCGCCAGAAGATTATCCAGATGCTAAAAACCAGCCTCATGTCCAGGTTGCTTTAAGACTGAAGCAAAATGGTTTCTCTGGATGCTCTGCAGGTGATACTGTTCCATATATTATCTGCTCGCAACAGGATTCAGATAATACACATTCTGGGGGAATTGCTCAAAGAGCTAGACATCCGGATGAGTTAAAACGAGACCCTAACAAGTGGATGATTGACATCGAGTACTATTTGTCACAGCAGATTCATCCTGTCGTTTCTCGTCTGTGTGCTTCCATTGAGGGTACTAGCCCTGCCCGACTAGCTGAATGTCTTGGACTTGACTCATCGAAGTTCCAATCAAGATCAATCGGGTCTAGCAACGAGGATACGTCTACCATGCTCTTATCTGTAATTGATGATGAAGACGAGAGATATCGTGGCTGTGAGCCACTGCGTTTATCATGCCCAAGCTGTACCAATACCTTCGAGTGCCCCGCTGTGTCCAGTCTGATTGCTAGTTTATCAGATCCAAATGAAGGAAAAGATGCTACTGTGAATTTCTGGCGTCGGATGCGGTGCCCAAGATGTCCAGATGATACTGATGAGTGCAGAGTTTCTCCTGCTGTGCTTGCCAACCAGATAAAAAGACAGGCTGATAATTTCATCAATCGGTATTACAAAGGTTTACTGATGTGCGATGACGAGGGTTGCAAATATTCAACTCACATTGTGAACCTTAGAGTGATGGGGGATTCTGAGAGAGGAACCATCTGCCCGAACTATCCACAATGCAACGGCCGTTTAGTAAGACAGTACACAGAGGCAGATCTATACAGGCAATTGTCCTACTTTTGCTATGTACTTGATGCAACCCGGTGTCTTGATAAGTTGGACCAGAAGATGCGGCTTCCTTTCGAGAAAGAGTTTGCAGTATTAAACCAAACAATAAGCTCGGCATTTCTGGAGATTCAGAGAATCCGAGACAGATGTGCTTTTGGATGGGTTCAATTGACAGATCTAGCAGTGTCAATCTGA
Protein Sequence
- >TraesPAR_scaffold_009847_01G000100
MDDAPADAAGSGRRTRTRGTEAVARSAALERLRAIRGGGARSAAAVQVRMEDPIYDTVAEEDYAALVARRREDAGAFIIDDDGLGYVDDGREEDWTHRALPSSSDEGSGGEDGAPRKRKQPRPPQAKRPPQQSAAAASLSAAAAMMGKQRLSSMFTSSVFKKPGSDRTKGSSLAADSIVDDVIAEFAPDENDREERRRRVGRVSAPTPTPAPVAQIKAIQAAVHAEMEVRSDNGFEPDVVSDHGNDMEVELQPEVELKPDVEMQPKLEAAPGSSTELVDENKSSEELKQEANGELKIEKVHRLNAKIKAEGTRNGDMLSATAGWMKICGEGENAGGEGEVSVNGNTDVDESSEFELKDGALPFYVLDAYEEPFDINSGTVYLFGKVVIGKRFHSCCVVVKNMQRCIYAIPSSSVFPRDTISRIEKNSTSSDASLSLRATLHELSSGLKSEVAEKLSDLNVSNFVMTPVKRNYAFERTDVPIGEQYVLKINYPYKDPAVPADLRGDHFHALLGTNNSALELFLIKRKIKGPSWLSISKFVACPSTQRVSWCKFEVTVDSPKDISVLMTSNTLEVPPVVVAAVNLKTIINEKHNVHEIVSASVICCHQVKIDTPMRSEDWQKRGTISHFTVMRKLEGSIFPIGLTKEASDRNQKAGSNVLALESSERALLNRLMIELSKLDCDVLVGHNISGFDLDVLLHRAQTCKVPSSMWSKIGRLRRSVMPRLTKGNTLYGSGASPGIMSCIAGRLLCDTYLCSRDLLREVSYSLTQLAETQLKKDRREVSPHDIPPMFQSAGTLLKLVEYGETDAWLSLELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHSFHAKKFIIPDKFAARNKELNSAKRKLNADTEGGNAADGAADPSIDDEVHHGDQGKARKGPSYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEFNICFTTVERSSDGNLPNLPTSKASGVLPELLKSLVERRRMVKSWLKTASGLKRQQFDIQQQALKLTANSMYGCLGFSNSRFFAKPLAELITLQGREILQNTVDLVQNNLNLEVIYGDTDSIMIYTGLDDISKAKAIAGKVIQEVNKKYRCLEIDLDGVYKRMLLLKKKKYAAIKVALDGSLRENIERKGLDMVRRDWSMLSKEIGDFCLNQILSGGTCDDVIESIHNSLVQVQAQMKSGQIELEKYIITKSLTKAPEDYPDAKNQPHVQVALRLKQNGFSGCSAGDTVPYIICSQQDSDNTHSGGIAQRARHPDELKRDPNKWMIDIEYYLSQQIHPVVSRLCASIEGTSPARLAECLGLDSSKFQSRSIGSSNEDTSTMLLSVIDDEDERYRGCEPLRLSCPSCTNTFECPAVSSLIASLSDPNEGKDATVNFWRRMRCPRCPDDTDECRVSPAVLANQIKRQADNFINRYYKGLLMCDDEGCKYSTHIVNLRVMGDSERGTICPNYPQCNGRLVRQYTEADLYRQLSYFCYVLDATRCLDKLDQKMRLPFEKEFAVLNQTISSAFLEIQRIRDRCAFGWVQLTDLAVSI