Information report for TraesNOR3D03G01982770
Gene Details
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Functional Annotation
- Relative of Early Flowering 6 (REF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a positive regulator of flowering in an FLC-dependent pathway. REF6 mutants have hyperacetylation of histone H4 at the FLC locus. REF6 interacts with BES1 in a Y2H assay and in vitro. REF6 may play a role in brassinoteroid signaling by affecting histone methylation in the promoters of BR-responsive genes. It is most closely related to the JHDM3 subfamily of JmjN/C proteins.
Homologous
- Triticum aestivum: Traes_3DL_C1684BF20.2, TraesCS3D02G407400, TraesCS3A02G412700
Gene Resources
- Pfam: PF02373 PF02375
- UniProt: A0A453G878
- AlphaFoldDB: A0A453G878
- InterPro: IPR003347 , IPR013087 , IPR036236
- PANTHER: PTHR10694 , PTHR10694:SF38
- SUPFAM: SSF51197 , SSF57667
- PROSITE: PS00028 , PS50157 , PS51184
- Gene3D: 2.60.120.650 , 3.30.160.60
Sequences
CDS Sequence
- >TraesNOR3D03G01982770
ATGGAACCACGCAGTTCTAGACTGAAGGAGAAGAAGAAGGGTGAAGGGGGACAATTGGTCAAGAAGTTATTTGTCCAAAATGCTATTCAAGATAATGAACTGCTTAGTTGTCTTCTGAATGATGGATCTTCTTGTATTATTCTTCCTATAAATGCTCATGATGGTCCTGTTCTTTCAGCTTTGCGTTCAAGATCCCAATTAATACCTAAATCCAAGTTGTCAAGATGTACACATGATTCACATAATGCAGAAGGTGACAAGGCGGATGTAATCAGTGCTGCTGGGCTCTTAGATCAGGGCTTATTATCCTGTGTCAGCTGTGGGATTTTAAGTTTCTCCTGTGTTGCTGTCATCAAACCAAGAGAGTGTGCATCAAAATACTTCATGTCTTCTGATTATAATTCAATCAATGATCAGATTGTTGGTTCTGGAGGGAGTCATCTGGCAAATGCAGCTGGAAGTGAAGGGACCAATGGTGGCATTCTACGACCCAGTTTTGAACCATATGGCAATGCAATACTTCCTGATGCTGGACCTGTCACTAGAAATTCTGCTCCTGATCTTCTGGCATCTCCTTATGGGAATCAACCGGACACTGATGAAGATAATCGGAACAAAAAAATTAAGGTCTCTCATGACTCCAGCGAATTAGACGGAACGAAGATTCCCTCAAGTAGCATTAAATGCCAACAAAGACCATCATCCCAGAGCTCTCAGTGTATTGGTGGCTCAAGTATTTCGAATGGACCAAGAGGTGTTCGCACAAGAAACAAATATCGACTTAAGATGGCACTGTCTCAAGGTTTTCAGCTAAAGAATAATTATTGGACAATGGAACAGAAGGTTCAACCTGAACCGTCAAGGTCAAAAGAGACTGTGAAGGAGCCACTTGATGTCAACGGTGCAGAAAATGATGCTACATGTAACAGCGCTGCAATCTCTGTGGGTGACCCTAGGATCTCTACAACCACGATGGACAACTTAAATAAACCAATTGTGAAAATTGATAAGGATTCATCGAGAATGCATGTATTTTGTCTTGAGCATGCTGTCGAGGTTGAGAAGCAACTCCAAGCAATTGGTGGAGCCCATGTTATTCTTTTATGTCGTCCAGAATATCTTAAAATAGAAGCAGAAGCAAGGTCGTTAGCTGCCGAACTGGAAGTTGAGCATGGCTGGAAGGACATCCATTTCAGGGAAGCCAACATGGAGGACAGGAAGATGATAGAAGAGCTCCTGCAGGATGAGGAATCAATACCAACAAGCAGTGATTGGGCTGTGAAACTGGGAACTAATCTTTACTACAGTGCAAATCTGGCCAAATCTCCTTTACATAACAAACAAATACCATACAACAGGGTCATCTATAGGGCATTTGGCTGCAGTTCTCCTGATAACTCACCAGTAAAACTGGAAAACTGCGAGGGGAGTCAAGACAGGCAGAAGAAAATAGTCTTGGCTGGCCGATGGTGTGGGAAAGCATGGATGTCAAACCAGGTCCATCCATTCCTAGCTCAGAGAATTGAAACCAGTGAACTGGAGGAGGCTGACAAGTCTAGTGGAGTGGAAGCCTCCAAAAGAAAGAGTAGCACTATAACAAATGTACCAAAATCAAGCAAGAAAAGGGAGAACATGGCTGTGGAGGTAACAACAGACACCAAGAGGCCCAGACTAGCTGAGGGGCACAGCTCCAAAGCATTAAAAGGTGTTGCTGAAGTGTCCCACCCGGCACCAACTGCAGTGGTTCCCCGTGTTAGCTCTAGGATTGCCGATAGAGCAAACAAGCTAAAATCAGAGATGACAGAAGAGGATGATGATCCTGCTTGCCGTCCAAAGCCAAAGGTCACTTCCCATTCGCGAAGAAGGCCACCAAAGAAGATTGAGGTTGAAGCAAAGAAGCAAATGAAGATGAGCAAAGGAGACAAGATGATGGTTCCAACTGCTCCAAACGATGACGAGGAGCACCCATCTGCTGCCAAGGGGGGTCCTTCTGCGGGCCCTGCCACTAAGCTGGAGTTGTCTCCGCGTAAGCACAGAACCAGAACCAAAACGATGAAGCAACTGAAGAAAGCCACAGGAGAGGAGAGGACTCCAAGAGATCATCCAATGCACGTCGAAGGGTACACATGCAGCATCGAGGGCTGTTCGATGAGCTTCGACACGAGAAATGAACTGTCCCTGCATGAGCTCGACATATGCCCGGTCAAGGGCTGTGGAAAGAAGTTCTTCACGCACAAGTTTCTGCTGCAGCACCGCAAGGTTCACACCGAAACGATGAAGCAACTGAAGAAAGCTACAGGAGAGGAGAGGGCGCCAAGAGATCATCCGATGCGCGTCGAAGGGTACACTTGCGGCATCGAGAGCTGCTCGATGAGCTTCGACACGAAAAAGGAACTGTCCCTGCATGAGCGCGACATCTGCCCGGTCAATGGCTGTGGGAAGAAGTTCTTCACGCACAAGTATCTGCTGCAGCACCGCAAGGTTCACACCGAGGACCGTCCGCTCAAGTGCCCGTGGGAGGGCTGCGACGTCGCGTTCAAGTGGGCATGGGCCAGGACAGAGCACCTTAGGGTTCATACCGGCGACAGGCCCTATGTTTGCCGTGAGCCAGGGTGTGCAGAGACGTTCAGGTTTGTATCAGATTCCAGCCGCCACAAACGCGAGACAGGCCACTCAACCAAGCAGACTAAAACCAAGACATGA
Protein Sequence
- >TraesNOR3D03G01982770
MEPRSSRLKEKKKGEGGQLVKKLFVQNAIQDNELLSCLLNDGSSCIILPINAHDGPVLSALRSRSQLIPKSKLSRCTHDSHNAEGDKADVISAAGLLDQGLLSCVSCGILSFSCVAVIKPRECASKYFMSSDYNSINDQIVGSGGSHLANAAGSEGTNGGILRPSFEPYGNAILPDAGPVTRNSAPDLLASPYGNQPDTDEDNRNKKIKVSHDSSELDGTKIPSSSIKCQQRPSSQSSQCIGGSSISNGPRGVRTRNKYRLKMALSQGFQLKNNYWTMEQKVQPEPSRSKETVKEPLDVNGAENDATCNSAAISVGDPRISTTTMDNLNKPIVKIDKDSSRMHVFCLEHAVEVEKQLQAIGGAHVILLCRPEYLKIEAEARSLAAELEVEHGWKDIHFREANMEDRKMIEELLQDEESIPTSSDWAVKLGTNLYYSANLAKSPLHNKQIPYNRVIYRAFGCSSPDNSPVKLENCEGSQDRQKKIVLAGRWCGKAWMSNQVHPFLAQRIETSELEEADKSSGVEASKRKSSTITNVPKSSKKRENMAVEVTTDTKRPRLAEGHSSKALKGVAEVSHPAPTAVVPRVSSRIADRANKLKSEMTEEDDDPACRPKPKVTSHSRRRPPKKIEVEAKKQMKMSKGDKMMVPTAPNDDEEHPSAAKGGPSAGPATKLELSPRKHRTRTKTMKQLKKATGEERTPRDHPMHVEGYTCSIEGCSMSFDTRNELSLHELDICPVKGCGKKFFTHKFLLQHRKVHTETMKQLKKATGEERAPRDHPMRVEGYTCGIESCSMSFDTKKELSLHERDICPVNGCGKKFFTHKYLLQHRKVHTEDRPLKCPWEGCDVAFKWAWARTEHLRVHTGDRPYVCREPGCAETFRFVSDSSRHKRETGHSTKQTKTKT