Information report for TraesLDM6D03G03771400
Gene Details
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Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.
Homologous
- Triticum aestivum: TraesCS6D02G297500, TraesCS6B02G348300
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: A0A9R1MVQ9
- EMBL: CM022228
- OMA: SSRGEMF
- InterPro: IPR002937 , IPR007526 , IPR009057 , IPR036188 , IPR036388 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF381
- SUPFAM: SSF46689 , SSF51905 , SSF54373
- PROSITE: PS50934
- Gene3D: 1.10.10.10 , 3.50.50.60 , 3.90.660.10
- OrthoDB: A0A9R1MVQ9
- STRING: 4565.A0A3B6QI91
Sequences
CDS Sequence
- >TraesLDM6D03G03771400
ATGGAGGAAGGCAACGGGGCGCAGCCGCCGCCCTTGCCTCCGCCCGACGCGCCCGAAGCCGAGGGGCATCTAGCTCTCGTCCCCATGGACCAGGACGCCGCCGCGGAGCCCATGGAGGACGGCGCGGCCGGGGGAGACGCCGCGGAGCCCATGGAGGAGGACGCGCCCACGTCCTCCCCGACCCCGTCCGCCCCCTCCGCCACCGCGGCCGTCGACGACTCCACCGTCGCGCGGAAGCGCCGCCGCCGCAAGAAGCAGTTCCCCGGCATGATCCCCACGGCCGGCGTCCGCGTCCTCCGCGCATCCTCCTCGTCGGGGGCCACCGCGGCGCACCTCGCCGGCATCCCGCGCCGCCGCGGCCGCCCGCCGACCAACTCCTCCCTCCGCCTGGCGCGGGAGCTGGATTCCGAGGCCACCATCGCGCTCGCCGCGGGGTTCCCCGCGGATACCCTCTCCGAGGACGAGGTCGCCGCCGCCGTCATCCCGCTCATAGGTGGCGCCGACCAGGCCAACTACCTCGTCGTGCGCAACCATATTCTCGCGCTGTGGCGCTCTAATCCCCTCTCCCCCGTCGCGGCCAACGCCGCGCTCGCATCCATCCGCGCCGAGCATGCGCCCCTCGTCGCCGCCGCACACTCCTTCCTATCGGACCATGCCTACATCAATTTCGGCCTCGCCCCCTCCATTGTCTCCCTACCACCAATCCCCCCTCCCTCCCATCCTCCCCCTTCTGTCCTCATCGTGGGTGCTGGCTTTGCTGGCCTCGCCGCCGCACGCCACCTTATGTCCCTTGGCTTCAAGGTTGCCATCGTCGAAGGCCGACTCCGCCCAGGTGGCCGTGTGTTTACTAAGACAATGCGGTCCTCTGCAGCAGACTATCCTGACATTGCTGCTTCTGCTGATCTGGGAGGCAGTGTGCTCACTGGTATTAATGGGAACCCCCTTGGTGTCATAGCACGGCAGCTTGGGTTCCCACTTCACAAGGTGCGGGACAAGTGCCCGCTGTATCTTCCGGATGGCCGCCCAGTTGACCCTGACATGGATGGTCGTGTTGAAGCTGCCTTTAACCAGCTTCTTGACAAGGTTTGCCAGCTGAGGCAGGTTATCGCAGATAGTGTCCCACACGGTGTGGATGTGTCACTTGGCATGGCACTCGAGGCATTCCGGGCAGCGCATGGTGTTGCCGCTGAGCCAGAGGAACGGATGCTTCTTGATTGGCATCTGGCCAACCTGGAGTATGCCAATGCCGCTCCTCTTGCTGATCTCTCCATGGCCTTCTGGGACCAGGATGATCCATACGAAATGGGTGGCGACCACTGCTTTATACCTGGTGGCAATTCCCAATTTGTCCGAGCACTTGCTGATGGCGTCCCGATATTCTATGGACAGAATGTGCGAAGGATACAGTATGGGTGTGATGGTGTGTTGGTCTACACTGATAAGCAGACATTCCGTGGTGATATGGCGCTCTGCACTGTTCCCCTTGGTGTGCTTAAGAAGGGGGACATTGATTTTGTGCCGGAGCTGCCAGTTCAGAAACGAGAGGCCATTCAGAGATTGGGTTTTGGGCTTCTTAATAAGGTTGTGATGTTATTCCCTTTTGACTTCTGGGATGGTAGGATTGATACATTTGGGCATTTGACTGAGGACTCTAGTCAACGAGGTGAATTCTTCCTGTTCTATAGCTATTCTTCAGTCTCAGGAGGTCCACTGCTCGTTGCCCTTGTTGCTGGGGAATCTGCTATCAGTTTTGAGAAGAAGTCACCAATGGAAAATGTCGAGAGGGTGTTAGACACACTTAAAAATATATTTTCACCCATGGGGATCGAGGTACCAAACCCACTGCAGGCAATATGTACTCGATGGGGCACTGACAAGTTTTCATATGGATCATATTCCCATGTGGCTATTGGGTCTTCCGGTGATGATTATGATATTTTGGCTGAGAGTGTTGGTGATAGAATCTTCTTCGCCGGGGAGGCAACAAATAGGCGGTACCCTGCAACGATGCATGGAGCTCTGCTTAGTGGGTACAGAGAGGCTGCCAATATTGTAAGAGCCGCTAGAAAGAGAGCAAAAAAGGTTGACTTATCTGAGAAAACAGTTGTCAGTTATGAAGTCAAAGATATTGTTAAAGATGATAACATTGATTTGGATGATCTCTTCCGTACCCCTGATGTTGCTTTCGGTGGCTTCTCAGTTCTGCATGACCCATCTATATCTGAACCTGATTCAGCATCATTGCTGCGTGTTGGAATTGGTGCCAGAAAGTTAGGCTCTGGTTCACTTTTCCTGTACGGCCTAATAATGCGGGAGAATGTAACTGAGCTAGCTGCAATGGAAGGCGACGAGCAGCGGTTGAGTACACTGTACCGAGATTTTGGGACAAAACTGGTGGGATTGGATGGCTTGGGTGATGCTGGGGAAAGCCTTATATCACGGATAAAGGCTTCTTCTAAGAAGTAG
Protein Sequence
- >TraesLDM6D03G03771400
MEEGNGAQPPPLPPPDAPEAEGHLALVPMDQDAAAEPMEDGAAGGDAAEPMEEDAPTSSPTPSAPSATAAVDDSTVARKRRRRKKQFPGMIPTAGVRVLRASSSSGATAAHLAGIPRRRGRPPTNSSLRLARELDSEATIALAAGFPADTLSEDEVAAAVIPLIGGADQANYLVVRNHILALWRSNPLSPVAANAALASIRAEHAPLVAAAHSFLSDHAYINFGLAPSIVSLPPIPPPSHPPPSVLIVGAGFAGLAAARHLMSLGFKVAIVEGRLRPGGRVFTKTMRSSAADYPDIAASADLGGSVLTGINGNPLGVIARQLGFPLHKVRDKCPLYLPDGRPVDPDMDGRVEAAFNQLLDKVCQLRQVIADSVPHGVDVSLGMALEAFRAAHGVAAEPEERMLLDWHLANLEYANAAPLADLSMAFWDQDDPYEMGGDHCFIPGGNSQFVRALADGVPIFYGQNVRRIQYGCDGVLVYTDKQTFRGDMALCTVPLGVLKKGDIDFVPELPVQKREAIQRLGFGLLNKVVMLFPFDFWDGRIDTFGHLTEDSSQRGEFFLFYSYSSVSGGPLLVALVAGESAISFEKKSPMENVERVLDTLKNIFSPMGIEVPNPLQAICTRWGTDKFSYGSYSHVAIGSSGDDYDILAESVGDRIFFAGEATNRRYPATMHGALLSGYREAANIVRAARKRAKKVDLSEKTVVSYEVKDIVKDDNIDLDDLFRTPDVAFGGFSVLHDPSISEPDSASLLRVGIGARKLGSGSLFLYGLIMRENVTELAAMEGDEQRLSTLYRDFGTKLVGLDGLGDAGESLISRIKASSKK