Information report for TraesLDM6B03G03594560
Gene Details
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Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.
Homologous
- Triticum aestivum: TraesCS6B02G348300, TraesCS6A02G318300
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: A0A9R1LCX7
- EMBL: CM022227
- OMA: NIMSENT
- InterPro: IPR002937 , IPR007526 , IPR009057 , IPR036188 , IPR036388 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF381
- SUPFAM: SSF46689 , SSF51905 , SSF54373
- PROSITE: PS50934
- Gene3D: 1.10.10.10 , 3.50.50.60 , 3.90.660.10
- OrthoDB: A0A9R1LCX7
- STRING: 4565.A0A3B6PQW5
Sequences
CDS Sequence
- >TraesLDM6B03G03594560
ATGGAGGACGGCAACGGGGCGCAACCGCCGCCCTTGCCTCCGCCCGACGCGCCCGAAGCCGCGGGGCATCTGGCTCTCGTCCCCATGGACCAGGACGAGGACCAGGCCGCCGCCGCGGAGCCCATGGAGGACGGCGCGGCCGGGGGAGACGCCGCGGAGCCCATGGAGGAGGACGCGCCCACGTCCTCCCCGACCCCGTCCGCCCCCTCCACCACCGCGGCCGTCGACGACTCCACCGTCGCGCGGAAGCGCCGCCGCCGCAAGAAGCAGTTCCCCGGCATGATCCCCACGGCCGGCGTCCGCGTCCTCCGCGCCTCCTCCTCGTCGGGGGCCACCGCGGCGCATCTCGCTGGCATCCCGCGCCGCCGCGGCCGCCCGCCGACCAACTCCTCCCTCCGCCTGGCGCGGGAGCTGGATTCCGAGGCCACCATCGCGCTCGCGGCGGGATTCCCCGCGGATACCCTCTCCGAGGACGAGGTCGCCGCCGCCGTCATCCCACTTATTGGTGGCGCCGACCAGGCCAACTACCTCGTCGTACGCAACCATATTCTCGCGCTCTGGCGCTCTAATCCCCTCTCCCCCGTCGCGTCCAACGCCGCGCTCGCATCCATCCGCGCCGAGCACGCGCCCCTCGTCGCCGCTGCACACTCCTTCCTATCGGACCATGCCTACATCAATTTCGGCCTCGCCCCCTCCATTGTCTCCCTACCACCAATTCCCCCTCCCTCCCATCCTCCCCCTTCTGTCCTCATCGTGGGTGCTGGCTTTGCTGGCCTCGCCGCTGCACGCCACCTTATGTCTCTTGGCTTCAAGGTTGCCATTGTCGAAGGCCGACTCCGCCCAGGTGGCCGTGTGTTTACTAAGACAATGCGGTCCTCTGCAGCAGACTATCCTGACATTGCTGCTTCTGCTGATCTGGGAGGCAGTGTGCTCACTGGTATCAATGGGAACCCCCTTGGTGTCATAGCACGGCAGCTTGGGTTCCCACTTCACAAGGTGCGGGACAAGTGCCCGCTGTATCTTCCGGATGGCCGCCCAGTCGACCCTGGCATGGATGATCGTGTTGAGGCTGCCTTTAACCAGCTTCTTGACAAGGTTTGCCAGCTGCGGCAGGTTATCGCAGATAGTGTTCCACACGGTGTGGATGTGTCACTTGGCATGGCACTCGAGGCATTCCGGGCAGCGCATGGTGTTGCCGCTGAGCCAGAGGAACGGATGCTTCTTGATTGGCATCTGGCCAACCTGGAGTATGCCAATGCCGCTCCTCTTGCTGATCTCTCCATGGCCTTCTGGGACCAGGATGATCCATATGAAATGGGTGGCGACCACTGCTTTATACCTGGTGGCAATTCCCAATTTGTCCGAGCACTTGCTGACGGCGTCCCGATATTCTATGGACAGAATGTGCGAAGGATACAGTATGGGTGTGATGGTGTGTTGGTCTACACTGATAAGCAAACATTCCGTGGTGATATGGCGCTCTGCACTGTCCCCCTTGGTGTGCTTAAGAAGGGGGACATCGATTTTGTGCCGGAGCTGCCAGTTCAGAAACGAGAGGCCATTCAGAGATTGGGTTTTGGGCTTCTTAATAAGGTTGTGATGTTATTCCCTTTTGACTTCTGGGATGGTAGGATTGATACGTTTGGGCATTTGACTGAGGACTCTAGTCAAAGAGGTGAATTCTTCCTGTTCTATAGCTATTCTTCAGTCTCGGGAGGTCCACTGCTCGTTGCCCTTGTTGCTGGGGAATCTGCTATCAGTTTTGAGAAGAAGTCACCAATGGAAAATGTCGAGAGGGTGTTAGACACACTTAAAAAAATCTTTTCACCCATGGGGATCGAGGTACCAAACCCACTGCAGGCAATATGTACTCGATGGGGCACTGACAAGTTTTCATATGGATCATATTCCCATGTGGCTGTTGGGTCTTCCGGTGATGATTATGATATTTTGGCTGAGAGTGTTGGTGATAGAATCTTCTTCGCCGGGGAGGCAACAAATAGGCGGTACCCTGCAACGATGCATGGAGCTCTGCTTAGTGGGTACAGAGAGGCTGCCAATATTGTAAGAGCCGCTAGAAAGAGAGCAAAAAAGGTTGACTTATCTGAGAAAATAGTTGTCAGTTATGAAGTCAAAGATATTGTTAAAGATGACAACATTGATTTGGATGATCTCTTCCGTACCCCTGATGTTGCTTTCGGTGGCTTCTCAGTTCTGCATGACCCATCTGTATCTGAACCTGATTCAGCATCATTGCTGCGTGTTGGAATTGGTGCCAGAAAGTTAGGCTCTGGTTCACTTTTCCTGTACGGCCTAATAATGCGGAAGAATGTAACTGAGCTAGCTGCAATGGAAGGCGACGAGCAGCGGTTGAGTACACTGTACCGAGATTTTGGGACAAAACTTGTGGGATTGGATGGCTTGGGTGATGCTGGGGAAAGCCTTATATCACGGATAAAGGCTTCTTCTAAGAAGTAG
Protein Sequence
- >TraesLDM6B03G03594560
MEDGNGAQPPPLPPPDAPEAAGHLALVPMDQDEDQAAAAEPMEDGAAGGDAAEPMEEDAPTSSPTPSAPSTTAAVDDSTVARKRRRRKKQFPGMIPTAGVRVLRASSSSGATAAHLAGIPRRRGRPPTNSSLRLARELDSEATIALAAGFPADTLSEDEVAAAVIPLIGGADQANYLVVRNHILALWRSNPLSPVASNAALASIRAEHAPLVAAAHSFLSDHAYINFGLAPSIVSLPPIPPPSHPPPSVLIVGAGFAGLAAARHLMSLGFKVAIVEGRLRPGGRVFTKTMRSSAADYPDIAASADLGGSVLTGINGNPLGVIARQLGFPLHKVRDKCPLYLPDGRPVDPGMDDRVEAAFNQLLDKVCQLRQVIADSVPHGVDVSLGMALEAFRAAHGVAAEPEERMLLDWHLANLEYANAAPLADLSMAFWDQDDPYEMGGDHCFIPGGNSQFVRALADGVPIFYGQNVRRIQYGCDGVLVYTDKQTFRGDMALCTVPLGVLKKGDIDFVPELPVQKREAIQRLGFGLLNKVVMLFPFDFWDGRIDTFGHLTEDSSQRGEFFLFYSYSSVSGGPLLVALVAGESAISFEKKSPMENVERVLDTLKKIFSPMGIEVPNPLQAICTRWGTDKFSYGSYSHVAVGSSGDDYDILAESVGDRIFFAGEATNRRYPATMHGALLSGYREAANIVRAARKRAKKVDLSEKIVVSYEVKDIVKDDNIDLDDLFRTPDVAFGGFSVLHDPSVSEPDSASLLRVGIGARKLGSGSLFLYGLIMRKNVTELAAMEGDEQRLSTLYRDFGTKLVGLDGLGDAGESLISRIKASSKK