Information report for TraesLDM5D03G03236120
Gene Details
|
|
Functional Annotation
- RNA binding protein which cotranscriptional splicing of a key floral repressor gene FLOWERING LOCUS C (FLC), , facilitates R-loop formation near FLC intron I to repress its transcription, thereby promoting the floral transition. inhibition of cotranscriptional splicing of FLC by nuclear HRLP condensates constitutes the molecular basis for down-regulation of FLC transcript levels.
Homologous
- Triticum aestivum: TraesCS5D02G562200, TraesCS7B02G001500
Gene Resources
- Pfam: PF00076 PF08777 PF11608 PF13893
- UniProt: A0A9R1L3U9
- EMBL: CM022225
- OMA: NEQHTHA
- InterPro: IPR000504 , IPR012677 , IPR035979
- PANTHER: PTHR21245
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 3.30.70.330
- OrthoDB: A0A9R1L3U9
- CDD: cd00590
- STRING: 4565.A0A3B6N346
Sequences
CDS Sequence
- >TraesLDM5D03G03236120
ATGCCGTCTGCGTCTGCGTCTGCTACCAATAATGATGAGCAGCAGCAGCAGGAGAAAATGGATACCAATAATGATGAGCAGCAGCAGCAGGAGAAAATGGAGGTGGAGGCTGGAGAGCCTCATGATACGCCCGCAGAGGAACAAGAAGAAGAAGCAGTCCCTACACAAGAAGAACAAGAGGCAGCAACAGACGCAGACAAGCAAACGGTACAGAACGAGGCAGCACAGCCACAGGTGATAATAGAGCAGGAGGGTGAAAAAGCCGACGATGATGATGATGTAGCGGTCAAGACTGATGTTCCTGCACATACTCCAGGCGCTGACACACAAAATGAGCAACACACTCACGCTATTAACCCACTCCACCAGGGACAAATGCTTGCTGCAACTCATGATGATAATTCAGAAAATAAGCACCCATTCCACCAACAACAAATGGATGCTGAGCAGGAAGAGGAGGACCCTGAAGAGGTCATTTTCGACGACTCTGTCTCTGTTGGTGAAGGGCAGGCCGCATCTGAGATCAAACAAGGAGAGGACGATGACGGGCAGGCTGCAGCTGAGAGCAAACAGGAAGAGCACCGTGCTAGGGCCGCGGAGGCTGCAGCTGAGGTCAAACAGCAAGAGGATGAGCGCAAGGTTATGTCAGACATGGCCAACAACAGGCAGCGCAAAAAGGAGCTAGAGATCTTTGTGGGAGGGCTGGACCGTGAAGCCGTCGAGGAGGATATTAGGAAGGTGTTTGCGCACGTCGGTGATGTTGTGGAGGTCCGTCTCCACAAGGATTTATCCACCAACAAGAACAAGGGCTTTGCTTTCGTCAGGTTTGCAAACAAACACCAGGTGGCTCGGGCGCTTGCTGAGGTGAAGAATCCTATGATACATGGCAAACGTTGTGGTGTCGCTGCTAGCGAGGACAACGATACACTCTTCTTGGGCAATATTTGCAATACGTGGACAAAGGAAGCTATTAAGAAGAGGCTGCTTGACTATGGGGTAGAAGGAGTTCAAAGCTTAACTCTTGTTCCTGATACTCAAAACGAAGGCCAGAGCCGTGGTTTTGCATTTCTCGAGTTTTCTTGCCACGCGGATGCGATGCTTGCATTCAAAAGGCTGCAGCAACCAGATGCTCTATTTGGTCATCCTGAGAGAACTGCAAAAGTTGCTTTTGCAGAGCCAATAAAAGAAGCAGATGCACAAGTTATGGCTCAGGTCAAATCAGTTTTTATTGATGGGCTTCCACCATACTGGGATGAAGAGCGTGTTAAAAACCGATTCAGAGCTTATGGTTTGATAGAACGGGTTGTGCTTGCTCGCAATATGCCCAGTGCTAAAAGAAACGATTTTGGATTTGTCAACTTCTCGACCCATGAGGAAGCTCTTGCCTGTATTGAAGCCACCAACAACACCGAACTGGGTGATGATGGAAAAGCAAAGCTAAAAGTAAGGGTTAGACTTTCGAACCCTCTACCTAAAAGTCAGGCTGTGAAAGGTGAAATGAGTGGCGGGTTTCGAATTGGACATCCTGGATCTGGTTTTAACAGGCCTGGTAGAGGTTTTAATAGGGGAAGAGCTGCCCCTCGCCGGGAAGGTTTCTATGGTGATAGGGGTTTCAATACTCATACTCCTGGTCGTGGTGGCAGATTTAATTCTGCATACAGTAACAACAGTTTTGAAGCTTCGCCCTCTGATTTCCGAGCCAGGCAGGCTCCTCCTGCCTTTCGAGGGGGTAGATGGGAACCTTCCTCAGGAAGGCAGCATGATTTCTTTGATAGAGGGCATGGGAGAGGATATCATCATCCACCTAGAGGGCCAACATTTGAGCCCGAGGGTGATTTTGGTAGACCCTTTGGTGAAAACCCATATCTCTATGAAGATGTTCGGCATGGTGCCAAGAGGCCATATTCTCACATGGAACCCGGTCCTCCTGGATACTTTGAGCATGGTCCTCCTCGTGTGCGCCCTCGCTTTGACCATTACGAGCAGCCGCCATTTCCTGGAGGGAACCGTTTTGGTCATTATGACCAGCCACCATTTCCTGGAGGGGACCGCCACAGAGACTCTTTTGGAACGAGGGGCGGTTATTCACGTGATCACTATGGCCCTGGTCCTGGTCATCCCCCGCCCCCTGCCCATGCCCATGCCCATGCCCCGCCCCCTGCCCCAGCTCAATATGGTAGGGGTGCATTCCGACCACACCATAGAGGCGGCGGGCATTCTGGAGGCGGTTATTACCACCACTAG
Protein Sequence
- >TraesLDM5D03G03236120
MPSASASATNNDEQQQQEKMDTNNDEQQQQEKMEVEAGEPHDTPAEEQEEEAVPTQEEQEAATDADKQTVQNEAAQPQVIIEQEGEKADDDDDVAVKTDVPAHTPGADTQNEQHTHAINPLHQGQMLAATHDDNSENKHPFHQQQMDAEQEEEDPEEVIFDDSVSVGEGQAASEIKQGEDDDGQAAAESKQEEHRARAAEAAAEVKQQEDERKVMSDMANNRQRKKELEIFVGGLDREAVEEDIRKVFAHVGDVVEVRLHKDLSTNKNKGFAFVRFANKHQVARALAEVKNPMIHGKRCGVAASEDNDTLFLGNICNTWTKEAIKKRLLDYGVEGVQSLTLVPDTQNEGQSRGFAFLEFSCHADAMLAFKRLQQPDALFGHPERTAKVAFAEPIKEADAQVMAQVKSVFIDGLPPYWDEERVKNRFRAYGLIERVVLARNMPSAKRNDFGFVNFSTHEEALACIEATNNTELGDDGKAKLKVRVRLSNPLPKSQAVKGEMSGGFRIGHPGSGFNRPGRGFNRGRAAPRREGFYGDRGFNTHTPGRGGRFNSAYSNNSFEASPSDFRARQAPPAFRGGRWEPSSGRQHDFFDRGHGRGYHHPPRGPTFEPEGDFGRPFGENPYLYEDVRHGAKRPYSHMEPGPPGYFEHGPPRVRPRFDHYEQPPFPGGNRFGHYDQPPFPGGDRHRDSFGTRGGYSRDHYGPGPGHPPPPAHAHAHAPPPAPAQYGRGAFRPHHRGGGHSGGGYYHH