Information report for TraesLDM5D03G03225220
Gene Details
|
|
Functional Annotation
- RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.
Homologous
- Triticum aestivum: TraesCS5D02G522100, TraesCS4D02G029200
Gene Resources
- Pfam: PF00565 PF00567
- UniProt: A0A9R1I313
- EMBL: CM022225
- OMA: QSPKDKF
- InterPro: IPR002999 , IPR016071 , IPR016685 , IPR035437 , IPR047395
- PANTHER: PTHR12302 , PTHR12302:SF2
- SUPFAM: SSF50199 , SSF63748
- PROSITE: PS50304 , PS50830
- Gene3D: 2.30.30.140 , 2.40.50.90
- OrthoDB: A0A9R1I313
- CDD: cd20443
- STRING: 4565.A0A3B6N0L6
Sequences
CDS Sequence
- >TraesLDM5D03G03225220
ATGGCATCGAAAGCTTCGGGATGGCTAAGGGGTAAGGTGAAGGCTGTGACTTCTGGGGATTGCCTTCTCATCATGGGGAGCACGAAAGCAGAGATCCCACAAGAGAAGTCCATCACTCTGTCACACCTTATGGCCCCAAGGCTGGCTCGTCGTGGTGGAGTGGATGAGCCATTTGCTTGGGAAAGCAGGGAGTTTCTGAGGAAACACTGCATAGGAAAGGAGGTCACATTCAGATTGGATTACACAGCTCCTAACATTGGACGGGAATTTGGTACCGTCTACTTTGGCGACAAGAATGTTGCCTACTTGGTAGTTGCTACAGGATGGGCAAAGGTAAAGGAGCAAGGCCCCAAGGGGGGTGAACAACTCCCATATGTTGCTGAGCTGCAACGGTTGGAGGAAGTTGCTAAGCAACACGGTTTAGGTCGTTGGAGCAAGGAACCTGGTGCTGCTGAAGAATCGATAAGAGATATTCCACCATCAGCAATTGGTGAATTAAGTGGTTTTGATGCAAAAGGTTTTGCAGTTGCAAATAAAGGCAAGAGTCTGGAAGCCATTGTCGAACAAGTTCGTGATGGCAGTACTGTTCGTGTTTACTTGCATCCAAGTTTCCAATTTGTCCAGATATATGTCGCGGGAGCACAGGCTCCGTCCATGGGGAGACGCCTTGCCAAATCAGAAGGCACTGCCGACGACACCACAAATGTTGACGATTCTGGGGAAGCTCCTGCACCGCTGACAACAGCACAAAGACTTGCTGCATCGACAGTCTCTACTGAAGTTCCACCAGATAGGTTTGGAAGAGAAGCTAAGCATTTCACAGAGACTCAAGTTCTGAACAGAGATGTGCGGGTTGTGGTGGAGGGCACAGACAGTTTTAATAATATAATTGGTTCGGTGTATTACCCTGATGGTGACACTGCTAAGGACCTGTCCCTTGAGCTTGTTAAAAATGGTCTTGCGAAATATGTGGAGTGGAGTGCGAACATGCTAGATGTTGAAGTCAAAATAAAGCTGAAGAATGCTGAACGTCAGGCAAAAAAGGAACAACTGCGAATTTGGACTGGATTTAAGCCACCAGTGACAAATTCAAAGCCAATCCATGATCAGAAATTCACTGGAAAAGTGGTAGAAGTTGTGAGTGGAGATTGTATTATTGTTGCTGATGATGCTGCTCCTTATGGAAGTCCTTCAGCAGAATGGCAGGTTAATCTTTCAAGTATTAGAGCTCCTAAGCTAGGCAATCCTCGCAGAGAGGACAACAAGCCCGACAAATTTGCTCGTGAATCTAAGGAATTCTTGCGCACACGGTTGATTGGCAAACAGGTGACCGTGGAAATGGAATATTCTGGAAGGATCAGCACCATGGATGGACAGAATGCTGTGCCTGTAATGAACTCGGCTGATACCAGAGTTTTGGATTATGGTTCAGTTTTTCTAGGTTCGCCATCACCAGCGGACGGAGATGACACATCTTCTGTTCCAAGCACAGGCACCCAGCCTAAAATTAATGTTGCTGAGCTTTTGCTCTCACGGGGCTTTGCTGAGATATCAAAACACCGTGACTACGAGGAAAGATCACATTATTTTGATGCTCTATTAGCGGCTCACTCACGTGCTGAGAAAGCAAAGAAAGGAATTCACTCTGACAAACTTCCTCCTGTGATGCATATAACAGATTTTACAATGGTTAATTCTAAGAAGGCCAAAGATTTCCTTCCCTTCCTGCAGCGGAATAGAAGGCATACTGCTGTTGTTGAATATGTTTTCAGTGGTCATCGTTTCAAACTAACAATTCCGAAGGAGACTTGCAGCATCGCTTTTTCATTGTCTGGTGTTAGGTGCCCTGGTAAAGATGAGCCCTACTCAAGCGAAGCTATTGCTTTGATGAGGAGGATGATTCTACAGCGTGATGTGGAGATTGAGGTTGAAACAGTTGATAGAACTGGAACATTCATAGGTTCCTTGTGGGAGTCTAAGACCAACGTGGGTTCTGTTCTTTTAGAGTCTGGCTTGGCCAAGCTTAGTTCATTTAGCTTGGATAGGATTCCAGATGCTCATGTCCTCACAAGAGCTGAAAAGTCAGCAAAGCAGCAGAAACTTAAGATATGGGAGAACTACGCCGAGGGTGAAAAAGTTTCGAACGTGTCCGCTTCTGAATCCAATGAACAGGAAATTCTCAAGGTTGTTGCTACTGAAGTTCTTGGTGGTGGAAAGTTCTATGCCCAGGCAGTAGGTGACCAGAGAGTATCTTCCATCCAACAACAGCTTGCATCGTTGAAATTTAAAGAGGCACCAGTCATTGGTGCTTTTAATCCTGTGAAGGGAGAGATGGTTCTTGCTCAGTTTAACCTCGACAACTCCTGGAATAGAGCCATGATTGTTAATGGACCCCGAGCTGTAGATTCTGTAGATGACCAGTTTGAAGTATTCTACATTGACTTTGGTAACCAAGAAGTGGTTCCTTACAATCGCATACGACCTGCGGACCCATCAGTATCCTCCTCTCCTCCTCTTGCTCAGCTGTGCAGCCTTGCCTTAATAAAAGTGCCTGGTCTGGAAGATGATTATGGTCAGGAAGCAGCAGAGTATCTTAGCGAATGTTTGCTAAGCAGTTCAAAACAATACCGGGCAATGATCGAAGAGCGCGACACTTCCGGTGGAAAAGTAACGAGACAAGGCACTGGAACTGTTCTCATTGTGACTCTTGTTGACCCAGAGACAGAATCCAGCATCAGTGCTGCCATGCTTGAGGAAGGGCTTGCTCGACTTGAAAGGAGCAAGAGATGGGACACCAAGGAGAGGAAGAAGGCTCTTGAGAATCTGGAACAGTTCCAGGAGAAAGCGAAGAAGGAAAGGCTGCGGCTGTGGCAGTATGGAGACGTCGAATCCGATGAGGATGAGCAAGCTCCAGGTGGAAGGAAACACACATTGTGTCGGTAG
Protein Sequence
- >TraesLDM5D03G03225220
MASKASGWLRGKVKAVTSGDCLLIMGSTKAEIPQEKSITLSHLMAPRLARRGGVDEPFAWESREFLRKHCIGKEVTFRLDYTAPNIGREFGTVYFGDKNVAYLVVATGWAKVKEQGPKGGEQLPYVAELQRLEEVAKQHGLGRWSKEPGAAEESIRDIPPSAIGELSGFDAKGFAVANKGKSLEAIVEQVRDGSTVRVYLHPSFQFVQIYVAGAQAPSMGRRLAKSEGTADDTTNVDDSGEAPAPLTTAQRLAASTVSTEVPPDRFGREAKHFTETQVLNRDVRVVVEGTDSFNNIIGSVYYPDGDTAKDLSLELVKNGLAKYVEWSANMLDVEVKIKLKNAERQAKKEQLRIWTGFKPPVTNSKPIHDQKFTGKVVEVVSGDCIIVADDAAPYGSPSAEWQVNLSSIRAPKLGNPRREDNKPDKFARESKEFLRTRLIGKQVTVEMEYSGRISTMDGQNAVPVMNSADTRVLDYGSVFLGSPSPADGDDTSSVPSTGTQPKINVAELLLSRGFAEISKHRDYEERSHYFDALLAAHSRAEKAKKGIHSDKLPPVMHITDFTMVNSKKAKDFLPFLQRNRRHTAVVEYVFSGHRFKLTIPKETCSIAFSLSGVRCPGKDEPYSSEAIALMRRMILQRDVEIEVETVDRTGTFIGSLWESKTNVGSVLLESGLAKLSSFSLDRIPDAHVLTRAEKSAKQQKLKIWENYAEGEKVSNVSASESNEQEILKVVATEVLGGGKFYAQAVGDQRVSSIQQQLASLKFKEAPVIGAFNPVKGEMVLAQFNLDNSWNRAMIVNGPRAVDSVDDQFEVFYIDFGNQEVVPYNRIRPADPSVSSSPPLAQLCSLALIKVPGLEDDYGQEAAEYLSECLLSSSKQYRAMIEERDTSGGKVTRQGTGTVLIVTLVDPETESSISAAMLEEGLARLERSKRWDTKERKKALENLEQFQEKAKKERLRLWQYGDVESDEDEQAPGGRKHTLCR