Information report for TraesLDM1A03G00063990
Gene Details
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Functional Annotation
- Encodes a nuclear-localized RRP6-like protein whose mutation leads to accumulation of an rRNA maturation by-product.
Homologous
- Triticum aestivum: TraesCS1A02G137000
Gene Resources
- Pfam: PF01612 PF00570
- UniProt: A0A3B5XXC1
- RefSeq: XP_044322038.1
- AlphaFoldDB: A0A3B5XXC1
- OMA: EHNHYRT
- InterPro: IPR002121 , IPR002562 , IPR010997 , IPR012337 , IPR036397 , IPR044876 , IPR045092 , IPR049559
- PANTHER: PTHR12124 , PTHR12124:SF47
- SUPFAM: SSF47819 , SSF53098
- PROSITE: PS50967
- Gene3D: 1.10.150.80 , 3.30.420.10
- OrthoDB: A0A3B5XXC1
- SMR: A0A3B5XXC1
- CDD: cd06147
- STRING: 4565.A0A3B5XXC1
Sequences
CDS Sequence
- >TraesLDM1A03G00063990
ATGGAAGCGGACGAGGCCCCTCACCCACCGCCGCCGTGGAAGCAGAACAAGTCGGCCGTGGCCGTCGAGGCCTCGTCGGGCTCGCTCGCCTCCGCCGCCGCGCGCTTGTCAGCCCGCTCCCGCGCGATCCCTCCGGCCCGCGACTTCCATTTCTACAACAACTTCCCCTCCTTCAAGTCCCCCGTCGCCGCCGCCGCCGCCAGGGCCGAGTCCTCCCTGGGCGTCCTCGGCGCCTCCACGCTCCTCCCCAAGCAGCAGCAGCAGCAGCCGCCTTTCCCCACGGAGGACCTCGACGACGCCTACGACTGGCTCGTCGCCCGCAATGACGACCTGCTCGAGATGTTTGCCGCCTCCGCGGACGAGTTCAAGGCGCTGCGGGAGAAGGAGGAGGCCCAGGGACGGAAAGTCGCGGCAGAAGAGATGGCGGGGGACGGGTTCCAGGTTGTCTACGGCAAGAAGAAGAAGAAGGTGGGTATGGGAGAGGAAGGAGTTGGCAGAAGTGAGGCCTTTGGATCTTCTGGTTCGGTGAGGATGGCCACCATGGATAGGGCTGCAGCATCAGGGCCAAAGCCGAAGGTGCCCTTCCACATCCCCACCATCCCACGCCCGCAGGACGTGCACCGCATTGTGGTGGACAACACGAGCAAGCCATTCGACCATACCTTCCTTGAGCGCAGCGATGACGGTGCCCGTGCCATACACCCACTGGAAAAACTCCCCATGGAGCAACTATTTGACAGGCGTGTTCCTGAAAGTGAGCCATTAAAGCCACCTGCTTTAGATGACACCCCTTTTACATTTGTTGAAGACCGGAAAACCTTGGAAGTGTTGGTGACAAAGCTGAAGAGTGCAACTGAGTTTGCTGTTGATTTGGAACACAACCACTATAGGTCTTTTCAGGGTCTCACCTGCCTGATGCAGATTTCAACTAGAACCGAGGACTTTATTGTAGACACTCTTAAGCTCCGCAATTGTCTTGGTGAGAACTTGAGAGAAGTTTTTCAAGATCCAACTAAGAAGAAGGTAATGCATGGGGCAGGTCGTGATATAATATGGCTTCAAAGAGACTTTGGAATATACGTGTGCAACCTTTTCGACACAGGGCAGGCTTCAAGAATCTTACAAATGGACCGCAACAGCCTGGAGCATCTTCTGCAATATTTCTGTGGAGTGACAGCAAACAAAGAATATCAGAGTGCAGATTGGAGGCTGAGGCCACTTCCTGATGAAATGACCAAGTATGCTAGAGAAGATACACACTATCTGCTCTACATATATGACTTGATGCGATTGCGATTGGTGAATGAGTCTTCAGGCGATGATCTTCTTTTGGAGGTTTGCAAGCGCAGCAATGGAATTTGCTTGCAACTATATGAGAAGGAGCTGCTGACTGATTCATCATACCTTTACATACATGGGTTGAAAGAAAATGACTTGAGTGCAAGGCAGCTGGCAGTTCTTGCTGGTCTATATCAATGGAGAGATGGCGTCGCTCGTGCTGAGGATGAGAGCACTGGTTATATATTACCCAATAAGACTCTACTTGAAATAGCCAAGCAGATGCCTGTGACCACTGGGAGGTTAAAAAGAACAGTGAAGTCAAAAAATAAATTTCTTGAGCACTATCTCGGACATGTCATTACTATCATAAGGAATGCCGTCGCAAATGCCGATGCTTTTGAAAGTATAGCTGAGCAACTGAAGAAGGGAAGGCTGGAAGAGTTAATGGCGGCAGAAGCGAAGGACGGCAGTGAAGACAGTGAAATGATTCCTGCCGTCGATGCTGATAGTAATGAAAGTAATCTTCAGCTGATTGCTGAACCTGATGTAGCTCCCACAGTGATTACAAATGTCCATACTGCTTCTTTCTGTACCGGGAATGTTACGAGCGGAGCTTCTTTAGGTAATTTGCAACTAGATAACATCACACCTGAAACCAAGAGCTTTGGGGCGTTGCCAGGCGCTACCGGGCAAGCAGATACAGTGATACCGAGCAATGGTGGTGGTCAGCAGCAAGTAATAAAGGCAACAGTTCAAGTATCGAAGAGACCTACGGCTTTTGGTGCTCTGTTAGGAAAACCCTCTACCGCAAGAAGGCCAAATCTATTTCCAGGATTTTCAAGTGACCAGAATAAAAGCAAGGTGGAGAAGATCAAGTCTTCCGTGGTACTGCCTTTCCATCATTTCTCAGGCGGTGCAAATCCTCCAGCAACTAGCCCTCCAGTAGCAAAATCGTCGGAACATGAAGCGGAAATCATGTGCGAGGATCCTGTGTCTCGGATGGAGGAAGTGATTCAGCTGGACACTGGAACAGATGACCCAGAAAACGGCAACGCAGATGGACAGAGCGATTGCAAACCTGGAGACACCGATGTGTCTAGCTCCCCTCCTGAGCCTTCCTCTGGCATCGAGCAGCGCTGCAGATCCCTCGACGAGAGCAGAGACCTTCAACAGAAGCACCAAGCACCGGAAGAACTGGAATTTAATGATCAGCTGAAGGCCTTCGATTACGCTGAAGCTAGAAAGAATACTTCATTTGGAGAAGTTAGATCTGAGAGAAGAAAGGACAATGCAGTGGCCAGCGCTATCAATGTGGATTCTGGAGATAAACGGAAAAGTTTGAAACAAACCCCCGGTGCCGGTGGCGGCGAAGAGGATGAAGGGAACTTCCAGAATCCACGAAGGCGACAGGCTTTCCCACCTTCTGGCAACAGGAGTGCTACGTACCATTAG
Protein Sequence
- >TraesLDM1A03G00063990
MEADEAPHPPPPWKQNKSAVAVEASSGSLASAAARLSARSRAIPPARDFHFYNNFPSFKSPVAAAAARAESSLGVLGASTLLPKQQQQQPPFPTEDLDDAYDWLVARNDDLLEMFAASADEFKALREKEEAQGRKVAAEEMAGDGFQVVYGKKKKKVGMGEEGVGRSEAFGSSGSVRMATMDRAAASGPKPKVPFHIPTIPRPQDVHRIVVDNTSKPFDHTFLERSDDGARAIHPLEKLPMEQLFDRRVPESEPLKPPALDDTPFTFVEDRKTLEVLVTKLKSATEFAVDLEHNHYRSFQGLTCLMQISTRTEDFIVDTLKLRNCLGENLREVFQDPTKKKVMHGAGRDIIWLQRDFGIYVCNLFDTGQASRILQMDRNSLEHLLQYFCGVTANKEYQSADWRLRPLPDEMTKYAREDTHYLLYIYDLMRLRLVNESSGDDLLLEVCKRSNGICLQLYEKELLTDSSYLYIHGLKENDLSARQLAVLAGLYQWRDGVARAEDESTGYILPNKTLLEIAKQMPVTTGRLKRTVKSKNKFLEHYLGHVITIIRNAVANADAFESIAEQLKKGRLEELMAAEAKDGSEDSEMIPAVDADSNESNLQLIAEPDVAPTVITNVHTASFCTGNVTSGASLGNLQLDNITPETKSFGALPGATGQADTVIPSNGGGQQQVIKATVQVSKRPTAFGALLGKPSTARRPNLFPGFSSDQNKSKVEKIKSSVVLPFHHFSGGANPPATSPPVAKSSEHEAEIMCEDPVSRMEEVIQLDTGTDDPENGNADGQSDCKPGDTDVSSSPPEPSSGIEQRCRSLDESRDLQQKHQAPEELEFNDQLKAFDYAEARKNTSFGEVRSERRKDNAVASAINVDSGDKRKSLKQTPGAGGGEEDEGNFQNPRRRQAFPPSGNRSATYH