Information report for TraesJUL6A03G03408060
Gene Details
|
|
Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.
Homologous
- Triticum aestivum: TraesCS6A02G318300
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: A0A9R1L7N9
- EMBL: CM022226
- OMA: CTRWGSE
- InterPro: IPR002937 , IPR007526 , IPR009057 , IPR036188 , IPR036388 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF381
- SUPFAM: SSF46689 , SSF51905 , SSF54373
- PROSITE: PS50934
- Gene3D: 1.10.10.10 , 3.50.50.60 , 3.90.660.10
- OrthoDB: A0A9R1L7N9
- STRING: 4565.A0A3B6NU79
Sequences
CDS Sequence
- >TraesJUL6A03G03408060
ATGGAGGAAGGCAACGGGGCGCAGCCACCGCCCTTGCCTCCGCCCGAAGCCGCGGGGCATCTAGCTCTCGTCCCCATGGAGCAGGACGAGGACCAGGCAGCCGCGGCGGAGCCCATGGAGGACGGCGCGGCCGGGGGAGACGCCGCGGAGCCCATGGAGGAGGACGCGCCCACGTCCTCCCCGACCCCGTCCGCCCCCTCCACCACCGCGGCCGTCGACGACTCCACCGTCGCGCGGAAGCGCCGCCGCCGCAAGAAGCAGTTCCCCGGCATGATCCCCACGGCCGGCGTCCGCGTCCTCCGCGCCTCCTCCTCGTCGGGGGCCACCGCGGCGCATCTCGCCGGCATCCCGCGCCGCCGTGGCCGCCCGCCGACCAACTCCTCCCTCCGCCTGGCGCGGGAGCTGGATTCCGAGGCCACCATCGCGCTCGCGGCGGGGTTCCCCGCCGATACCCTCTCCGAGGACGAGGTCGCCGCCGCCGTCATCCCGCTTATCGGTGGCGCCGACCAGGCCAACTACCTCGTCGTGCGCAACCATATTCTCGCGCTCTGGCGCTCTAATCCCCTCTCCCCCGTCGCGGCCAACGCCGCGCTCGCATCCATCCGCGCCGAGCATGCGCCCCTCGTCGCCGCCGCACACTCCTTCCTATCGGACCATGCCTACATCAATTTCGGCCTCGCCCCCTCCATTGTCTCCCTACCACCAATCCCCCCTCCCTCCCATCCTCCCCCTTCTGTCCTCATCGTGGGTGCTGGCTTTGCTGGCCTCGCCGCCGCACGCCACCTTATGTCCCTTGGCTTCAAGGTTGCCATTGTTGAAGGCCGACTCCGCCCAGGTGGCCGTGTGTTTACTAAGACAATGCGGTCCTCTGCAGCAGACTATCCTGACATTGCTGCTTCTGCTGATCTGGGAGGCAGTGTGCTCACTGGTATTAATGGGAACCCCCTTGGTGTCATAGCACGGCAGCTTGGGTTCCCACTTCACAAGGTGCGGGACAAGTGCCCGCTGTATCTTCCGGATGGCCGCCCAGTCGACCCTGACATGGATGGTCGTGTTGAAGCTGCCTTTAACCAGCTTCTTGACAAGGTTTGCCAGCTGCGGCAGGTTATCGCAGATAATGTCCCACACGGTGTGGATGTGTCACTTGGCATGGCACTCGAGGCATTCCGGGCAGCGCATGGTGTTGCCGCTGAGCCAGAGGAACGGATGCTTCTTGATTGGCATCTGGCCAACCTGGAGTATGCCAATGCCGCTCCTCTTGCTGATCTCTCCATGGCCTTCTGGGACCAGGATGATCCATACGAAATGGGTGGCGACCACTGCTTTATACCTGGTGGCAATTCCCAATTTGTCCGAGCACTTGCTGATGGCGTCCCGATATTCTATGGACAGAATGTGCGAAGGATACAGTATGGGTGTGATGGTGTGTTGGTCTACACTGATAAGCAGACATTCCGTGGTGATATGGCGCTCTGCACTGTTCCCCTTGGTGTGCTTAAGAAGGGGGACATTGATTTTGTGCCAGAGCTGCCAGTTCAGAAACAAGAAGCCATTCAGAGATTGGGTTTTGGGCTTCTTAATAAGGTTGTGATGTTATTCCCTTTTGACTTCTGGGATGGTAGGATTGATACATTTGGGCATTTGACTGAGGACTCTAGTCAACGAGGTGAATTCTTCCTGTTCTATAGCTATTCTTCAGTCTCAGGAGGTCCACTGCTTGTTGCCCTTGTTGCTGGGGAATCTGCTATCAGTTTTGAGAAGAAGTCACCAATGGAAAATGTCGAGAGGGTGTTAGACACACTTAAAAAAATCTTTTCACCCATGGGGATCGAGGTACCAAACCCACTGCAGGCAATATGTACTCGATGGGGCACTGACAGGTTTTCATATGGATCATATTCACATGTGGCTATTGGGTCTTCCGGTGATGATTATGATATTTTGGCTGAGAGTGTTGGTGATAGAATCTTCTTTGCCGGGGAGGCAACAAATAGGCGGTACCCTGCAACGATGCATGGAGCTCTGCTTAGTGGGTACAGAGAGGCTGCCAATATTGTAAGAGCCGCTAGAAAGAGAGCAAAAAAGGTTGACTTATCTGAGAAAATAGTTGTCAGTTATGAAGCCAAAGATATTGTTCAAGATGACAACATTGATTTGGATGATCTCTTCCGTACCCCTGATGTTGCTTTCGGTGGCTTCTCAGTTCTGCATGACCCATCTACATCTGAACCTGATTCAGCATCATTGCTGCGTGTTGGAATTGGTGCCAGAAAGTTAGGCTCTGGTTCACTTTTCCTGTATGGCCTAATAATGCGGAAGAATGTAACTGAGCTAGCTGCAATGGAAGGCGACGAGCAGCGGTTGAGTACACTGTACCGAGATTTTGGGACAAAACTGGTGGGATTGGATGGCTTGGGTGATGCTGGGGAAAGCCTTATATCACGGATAAAGGCTTCTTCTAAGAAGTAG
Protein Sequence
- >TraesJUL6A03G03408060
MEEGNGAQPPPLPPPEAAGHLALVPMEQDEDQAAAAEPMEDGAAGGDAAEPMEEDAPTSSPTPSAPSTTAAVDDSTVARKRRRRKKQFPGMIPTAGVRVLRASSSSGATAAHLAGIPRRRGRPPTNSSLRLARELDSEATIALAAGFPADTLSEDEVAAAVIPLIGGADQANYLVVRNHILALWRSNPLSPVAANAALASIRAEHAPLVAAAHSFLSDHAYINFGLAPSIVSLPPIPPPSHPPPSVLIVGAGFAGLAAARHLMSLGFKVAIVEGRLRPGGRVFTKTMRSSAADYPDIAASADLGGSVLTGINGNPLGVIARQLGFPLHKVRDKCPLYLPDGRPVDPDMDGRVEAAFNQLLDKVCQLRQVIADNVPHGVDVSLGMALEAFRAAHGVAAEPEERMLLDWHLANLEYANAAPLADLSMAFWDQDDPYEMGGDHCFIPGGNSQFVRALADGVPIFYGQNVRRIQYGCDGVLVYTDKQTFRGDMALCTVPLGVLKKGDIDFVPELPVQKQEAIQRLGFGLLNKVVMLFPFDFWDGRIDTFGHLTEDSSQRGEFFLFYSYSSVSGGPLLVALVAGESAISFEKKSPMENVERVLDTLKKIFSPMGIEVPNPLQAICTRWGTDRFSYGSYSHVAIGSSGDDYDILAESVGDRIFFAGEATNRRYPATMHGALLSGYREAANIVRAARKRAKKVDLSEKIVVSYEAKDIVQDDNIDLDDLFRTPDVAFGGFSVLHDPSTSEPDSASLLRVGIGARKLGSGSLFLYGLIMRKNVTELAAMEGDEQRLSTLYRDFGTKLVGLDGLGDAGESLISRIKASSKK