Information report for TraesCS4D02G287000
Gene Details
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Functional Annotation
- Mutant has early-flowering phenotype, encodes a putative nucleoporin. Required for the activation of downstream defense pathways by the snc1 mutation. Involved in basal resistance against bacterial pathogens.
Homologous
- Arabidopsis thaliana — AT1G80680
Gene Resources
- Pfam: PF04096 PF12110
- UniProt: A0A9R1KIL5
- EMBL: CM022222
- OMA: RWKFEVD
- InterPro: IPR007230 , IPR021967 , IPR036903 , IPR037665
- PANTHER: PTHR23198 , PTHR23198:SF26
- SUPFAM: SSF82215
- PROSITE: PS51434
- Gene3D: 1.25.40.690 , 3.30.1610.10
- OrthoDB: A0A9R1KIL5
- STRING: 4565.A0A3B6JN14
Sequences
CDS Sequence
- >TraesCS4D02G287000
ATGGCTGTCGACGCCATGTTCCCTGTCCTGCGCTTCTCCGACTACTTCACTCGGCCGTCGGTCGAGGAGCTGGTCGAGAGGGAGGCGGCTGACCCGGGCTACTGCAGCAGGGTTCCAGATTTCGTCGTCGGCAGGGTGAGGTATGGGCAGGTTAAGTTCTCTGGCAGCACCGATGTGAGGGGGCTGGACCTGAACGAAATCGTCAAGTTTGGCCGCCATTCTGTGGTGGTTTACCGGGACGAGGCTGGCAAGCCGGCCGTAGGGCATGGCCTCAATAAAGCTGCAGAGGTGACCCTGAAGCTGGATTTGAGTACACTTCCGAAACCCGGCCTCCTAGTTGAGTTGCTAAGGTGCCGCGCGAAGAAGCAAGGTGCTAGGTTTCTCTCGTTCAATCCTGTGAATGGTAGCTGGAAGTTCGAGGTTGATCACTTCAGTAGGTTTGGCCTTGTGGACGAGGAGGATGATGATGTTGCCATGGATGAGCCGGCTGTACGACAACCGATTGCTGAAGCAAGAGACCCACCTTCCAATGGGCATGAACTGGAGCTTTCGCATTCGTTGCCTGCTCATCTTGGGCTTGACCCTGCAAAGATGCAGGAAATGCGGATGGCATTGTTTCCCAATGATGAGGAAGAAGAAGACATGGTGGATGGCTTTCCATCTGATCACAGACACCTCAGCAGAGAAAGGATGAATGTGGATTCACCCAACACAAGTGGTAAAGGTCCGAGGATGAGGTCTCCGTCTCCTTTGCACGGTTCTTCTCAGAAATTTGGAAGGAGATATGGTGTGCTTGCAAGGAAAGAACCACATGCACTGCTGGAATACAATGTAAATTCTACAGAGCTTGGTGCATCTTCTCATGGTATTCTCATGTCTGGAAAAAACAAGGGATTTCCGGTGAGAATGACCAAGGTAGAAGGCTTCAAACTACCAGCTGAGCAAGCAACTCCTGTTGCTGGAAAAGTATATTCTAACTGCATAGTGGATGCTGCTTTATTTATGGGTAGATCATTTCGAGTTGGTTGGGGACCAAATGGCATCCTTCTCCATTCTGGTAGTCCTGTCAATACTCCTGGAACTGGCCTTTCTTCTGTTATTCACATAGAGAAAGTTGCAGGTGATAAAGTTGTGCGTGATGAGCAGAACAAAGTTAAAGAGGAGCTGGCAGAACTATGTTTCTCGGATCCAATGGACCTCCATAAGAGGCTTGACCGCGAAATTCTGGAAACTGAGTCTGACTTGTTTAAATTAAAGCTTCAGAAAGTTGTGGCAAGTCGTTTGGTTTTGCCAGATATTTGCAGATCATATATTGATATCATCGAAAGGCAGCTTGAAATCAGTGATTTATCCATGTCTTCACGTGTGCTGTTAATGCATCAAGTTACAGTTTGGGAGTTAATTAGGGTCCTGTTCTCAGAGAGAGAAGCTGGCAACCAGTTGGAATTTTGTGGTGATGAGGATCAGGAGGGCATGATTTTGGATAAGAAAGAAGGTTCTGTGAACATTGACCCTGAAGCACTTCCTTTGGTTAGGAGAGCAGACTTTAGCAATTGGTTACAGGACAGTGTTTGTCATCGGGTACAAGGAGAGGTGGGTTCTTTAAGTGATGCCAGATACTTGGAGCATATTGTTCTGCATTTGACTGGTCGACAATTGGACACAGCCACAGAAATTGCTGCTTCAAAGGGCGATGTCCGCTTGGCAGTCCTGCTAAGCCAGGCAGGTGGATCGATGTTAAATCGCTCGGATGTTGCTCAGCAGCTGGATCTGTGGAAAATAAATGGTCTGGACTTCGATTATATTGAGGAAGACAGGTTAAAGATATACGAGTTGCTTACTGGTAACATACAAGGCGCTTTACTTGATTCACCAATCGACTGGAAAAGGTACCTTGGTTTAATCATGTGGTATCAGTTGTCACCAGATACATCACTTGATATTATCATTCGGTGTTATCACCAACTACTTGGTGAGGGCAAAGTTCCAAATCCTGTTCCTGTATACATCGATGAAGGACCTCTCGAGGAAGCACTTCAGTGGTCCCCAGGTGACCGGTTTGACATATCTTTTTATTTAATGCTTCTTCATGCAAACCAAGATGAGAAGTTTGGGCTTCTAAAGACTATGTTCAGTGCATTCTCGTCATCGTATGATCCCATGGACTACCATATGATCTGGCATCAACGATCTATTCTCGAAGCTATTGGTGCTTTCAGTACAAATGATCTTCATGTACTGGATTTGAGTTTTGTCCATCAGTTACTGTGTCTTGGGAAGTGCCATTGGGCTATCTACGTCATTCTGCATATGCCACATCTGGATGATGCCCCTTACATCCACGAAAAGTTAATCAGGGAAATTTTGTCGCAGTATTGTGAGATATGGAGCAAAGATGGGGCTCAGAGGCAATATATTGCAGAACTTGGTATACCAGCAGAATGGATACATGAGGCTCTGGCTCTTTATCAAGAATACTATGGAGATCGACAAGGTGCACTGGGGAATTATATTCAATGCGGCAATTGGAAGAAAGCTCATACCATTTTCATGACATCTGTTGCTCATTCTTTGTTTCTGTCATCCAAACATCAAGAAATCTTTGACATTACAAGTGCTTTGGAGAATCACAAATCTGAAATTGCTGACTGGGACGTTGGTGCTGCAATATACATAGACTATTTCAACATAAAAAACTGCATGCAAGAAGAAAGTACTATGGACGATGATTCAGATCCACTTGAGAGTAAAAATGAATTGTGCAAGAGTTTCTTCGATCGATTAAATGACTCGCTGGGTATCTGGGGAAGCAAATTACCCATTGAGGCAAGGGCATGCTTCTCGAAGATGGCAGAGGAGCTCTGTGAGCTTCTAATGAGTTGCCCCGGCAAGGGCTCGGCGCCGGATCTCTTCATGAGCTGCTTTCAGACGATGCTCAACGCCCCTGTCCCCAGTGACGACAGGGCGTCCTACCTGCAGGAGGCGGTCTCTGTTTTCACCGACATACTCTGCGGGGACTCATTCTAG
Protein Sequence
- >TraesCS4D02G287000
MAVDAMFPVLRFSDYFTRPSVEELVEREAADPGYCSRVPDFVVGRVRYGQVKFSGSTDVRGLDLNEIVKFGRHSVVVYRDEAGKPAVGHGLNKAAEVTLKLDLSTLPKPGLLVELLRCRAKKQGARFLSFNPVNGSWKFEVDHFSRFGLVDEEDDDVAMDEPAVRQPIAEARDPPSNGHELELSHSLPAHLGLDPAKMQEMRMALFPNDEEEEDMVDGFPSDHRHLSRERMNVDSPNTSGKGPRMRSPSPLHGSSQKFGRRYGVLARKEPHALLEYNVNSTELGASSHGILMSGKNKGFPVRMTKVEGFKLPAEQATPVAGKVYSNCIVDAALFMGRSFRVGWGPNGILLHSGSPVNTPGTGLSSVIHIEKVAGDKVVRDEQNKVKEELAELCFSDPMDLHKRLDREILETESDLFKLKLQKVVASRLVLPDICRSYIDIIERQLEISDLSMSSRVLLMHQVTVWELIRVLFSEREAGNQLEFCGDEDQEGMILDKKEGSVNIDPEALPLVRRADFSNWLQDSVCHRVQGEVGSLSDARYLEHIVLHLTGRQLDTATEIAASKGDVRLAVLLSQAGGSMLNRSDVAQQLDLWKINGLDFDYIEEDRLKIYELLTGNIQGALLDSPIDWKRYLGLIMWYQLSPDTSLDIIIRCYHQLLGEGKVPNPVPVYIDEGPLEEALQWSPGDRFDISFYLMLLHANQDEKFGLLKTMFSAFSSSYDPMDYHMIWHQRSILEAIGAFSTNDLHVLDLSFVHQLLCLGKCHWAIYVILHMPHLDDAPYIHEKLIREILSQYCEIWSKDGAQRQYIAELGIPAEWIHEALALYQEYYGDRQGALGNYIQCGNWKKAHTIFMTSVAHSLFLSSKHQEIFDITSALENHKSEIADWDVGAAIYIDYFNIKNCMQEESTMDDDSDPLESKNELCKSFFDRLNDSLGIWGSKLPIEARACFSKMAEELCELLMSCPGKGSAPDLFMSCFQTMLNAPVPSDDRASYLQEAVSVFTDILCGDSF