Information report for Tp57577_TGAC_v2_gene38602
Gene Details
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Functional Annotation
- Encodes a protein with several WD40 repeats at the C-terminus and predicted protein-protein interaction domains at the N-terminus. Together with the TOPLESS-RELATED PROTEINS (TPRs), it is thought to be involved in transcriptional repression of root-promoting genes in the top half of the embryo during the transition stage of embryogenesis. It can also interact with IAA12 through the EAR domain of IAA12 and the CTLH domain of TPL. The ability of IAA12 to repress transcription is diminished in a tpl-1 mutant background.
Homologous
- Actinidia chinensis: CEY00_Acc22153
- Beta vulgaris: BVRB_9g219140
- Citrullus lanatus: Cla97C07G139070
- Cucumis melo: MELO3C017848
- Cucumis sativus: CsGy4G001800
- Glycine max: Glyma.08G214600, Glyma.07G028000
- Gossypium hirsutum: Gohir.D05G122800, Gohir.A05G121900
- Juglans regia: Jr12_20240, Jr12_20250, Jr07_31810, Jr07_31820
- Manihot esculenta: MANES_04G108600
- Medicago truncatula: Medtr4g009840
- Prunus persica: PRUPE_3G093100
- Rosa chinensis: RchiOBHm_Chr2g0134371
- Sesamum indicum: SIN_1021914
- Vitis vinifera: VIT_09s0002g08370
Gene Resources
- Pfam: PF00400
- UniProt: A0A2K3NP36
- EMBL: ASHM01000478 , ASHM01000523
- AlphaFoldDB: A0A2K3NP36
- InterPro: IPR001680 , IPR006594 , IPR006595 , IPR011047 , IPR015943 , IPR019775 , IPR027728 , IPR036322 , IPR048419 , IPR054080 , IPR054532
- PANTHER: PTHR44083 , PTHR44083:SF45
- SUPFAM: SSF50978 , SSF50998 , SSF75011
- PROSITE: PS00678 , PS50082 , PS50294 , PS50896 , PS50897
- Gene3D: 2.130.10.10
- OrthoDB: A0A2K3NP36
- STRING: 57577.A0A2K3NP36
Sequences
CDS Sequence
- >Tp57577_TGAC_v2_gene38602
ATGTCATCTCTGAGTAGAGAATTGGTGTTCTTGATCTTGCAGTTTCTGGATGAGGAAAAGTTCAAGGAAACTGTTCACAAGCTTGAGCAGGAGTCTGGATTTTTCTTTAACATGAAATATTTTGAGGATGAAGTGCATAATGGGAATTGGGATGAAGTTGAAAAGTACTTATCTGGTTTCACAAAAGTAGATGATAATAGGTATTCTATGAAGATATTTTTTGAGATAAGAAAGCAAAAGTATCTTGAGGCATTGGATAAGCATGATCGGTCGAAGGCTGTAGAGATATTAGTGAAGGATTTGAAAGTGTTTGCTACATTTAACGAAGAACTGTTCAAGGAAATCACACAGCTTTTGACATTGGAGAATTTTAGGGAAAACGAACAGTTGTCTAAGTATGGTGATACTAAGTCTGCGCGGGCAATCATGTTGGTTGAGCTTAAGAAGCTGATTGAAGCAAATCCCTTATTTCGCGACAAATTGCAGTTTCCTAACCTTAAAAACTCGAGGTTGAGGACACTCATCAATCAAAGCTTGAATTGGCAACATCAACTTTGTAAGAATCCACGTCCAAATCCTGATATAAAAACTCTTTTTGTGGATCACTCATGCGGACAACCAAATGGTGCACGAGCTCCTTCACCTGCCAACAATCCACTATTAGGATCCTTACCAAAGGCTGGTGGATTTCCTCCTCTTGGTGCTCATGGGCCTTTCCAACCTACTCCGGCACCAGTGCCAACCCAGCTCGCCGGTTGGATGTCAAATCCTACCCCTGTAGCACATGCTGCAGTTTCTGGTGGAGGAACTATAGGTCTTGGTGCTCCATCAATGCCTGGTGCTTTGAAGCATCCTCGGACGCCTCCACCTAATCTTTCTGTTGACTATCCATCTGGAGACTCAGATCATGTTGCTAAGAGAACAAGGCCAATGGGAATAACAGATGAGGTAAATCTACCTGTCAATGTGTTGTCGGCACCATTCCCAGGGCATGGTCATAGTCAGGCTTTTAATGCACCTGATGACTTGCCGCTACCAAAGACTGTCATGCGAACTCTGAATCAGGGCTCATCTCCTATGAGCATGGACTTCCATCCAGTTCAACAATCTTTACTTCTAGTTGGTACAAATGTGGGGGACATTGCATTATGGGAGGTGGGTTCTAGGGAGCGGTTGGTCTCAAGGAACTTCAAAGTTTGGGATCTTAGTGCATGTTCAATGCCATTTCAGGCTGCTCTTGTCAAAGATCCAAGCGTTTCTGTTAACCGTGTGATTTGGAGTCCTGATGGCGCTTTATTTGGAGTTGCTTATTCGAGGCACATTGTTCAAATATACTCTTATCATGGCGGGGAGGAAGTTCGGCAGCACTTGGAGATTGATGCTCATGTTGGCGGAGTAAATGATCTAGCATTTTCCCACCCGAATAAGCAACTGTGTGTGATAACTTGTGGTGATGATAAGACCATTAAGGTGTGGGATGCTGCTTCGGGAACAAAGCAGTATACATTTGAAGGTCACGAGGCTCCAGTTTATTCAGTCTGTCCGCATTACAAAGAAAACATTCAGTTCATCTTTTCAACAGCTCTAGACGGAAAAATAAAAGCATGGTTGTATGACAATTTGGGATCTCGTGTTGATTATGATGCTCCTGGTCGATGGTGCACAACTATGGCTTATAGTGCTGACGGTACAAGGCTCTTTTCATGTGGAACAAGCAAAGATGGAGAATCCTCTATTGTGGAGTGGAATGAGAGTGAAGGAGCTGTGAAAAGGACTTATCAAGGATTTCGTAAACGGTCTTCAGGCGTTGTGCAATTTGATACTACTAAAAATCGATTTTTGGCTGCTGGCGACGATTTCTCGATTAAATTTTGGGATATGGATAATATTCAGCTTTTGACAACCGTTGATGCTGATGGGGGTCTTCCTGCAAGTCCACGTATTCGTTTCAACAAAGAGGGAACTCTTCTAGCCGTCTCAGCAAATGATAATGGAATCAAAATTATAGCCAATGCTGAGGGTATTCGTTTATTGCGTACATTAGAGAATTCTATGTACGATGCATCAAGAGCATCAGAATTAGCAAAGCCTACTATAAATTCAATGTCTTCTGCTGCCGCTGCAACTAGTGCTGCCCTAGCTGAGAGAGCTTCATCCGCAGCGGCTATTGCTGGAATGAACGGCGACGCTCGAAACATGGGCGATGTTAAACCTAGAATAACCGAAGAATCCAATGACAAGTCAAAGATATGGAAGCTCACTGAAATCAACGAACCATCTCATTGTAGATCCTTGAAGCTGCCAGAGAATGTTAGAGTAAACAAGATTTCGAGGTTGATCTATACAAATTCAGGTAATGCTATTCTAGCGTTGGCATCAAATGCCATTCACCTTCTCTGGAAATGGCCGCGAAATGATCGTAATTCATCTGGCAAGGCCAATGCCTCTGTGCAACCTCAGTTATGGCAACCATCGAGTGGCATCCTGATGACTAATGACATCGCTGATAGCAATCCTGAAGATTCTGTTCCCTGCTTTGCTCTGTCGAAAAATGATTCGTATGTAATGTCTGCATCAGGAGGAAAGATATCCTTGTTCAACATGATGACTTTTAAGACGATGACAACTTTCATGCCTCCACCACCTGCTGCTACCTTTCTTGCTTTCCATCCTCAGGACAACAATATTATTGCTATTGGCATGGATGATTCCTCCATTCAGATATACAATGTCCGTGTTGATGAGGTTAAAAGTAAACTCAAAGGTCATACAAAAAGGATAACTGGTCTTGCTTTCTCCCATGTATTGAATGTTCTTGTTTCATCCGGTGCGGATGCTCAGATTTGTGTGTGGAATACTGATGGATGGGAAAAACAGAAGACCAGATTCTTGCAGCTACCTCCCGGGAGGACTCCATCAGCACAGTCAGATACTCGTGTACAGTTTCATCAGGATCAGATACAGTTCTTGGTTGTACACGAAACTCAGCTTGCCATTTTTGAAGCAACTAAGCTAGATTGTCTAAAGCAGTGGGCTCCAAGGGATTCTTCTGCACCAATATCACATGCAACATTTTCGTGCGACAGCCAGCTGATATATGCAAGCTTTTTAGATGCGACTGTCTGTGTATTTAATGCTTCAAATCTCAGATTACGGTGTCGTATCAATCCTTCTGCTTATCTTCCTGCAAGTGTCAGCAATTCAAATGTACAACCACTAGTAATTGCAGCACATCCACAAGAACCAAATCAGTTTGCTGTAGGACTATCTGATGGTGGAGTTCATGTGTTTGAGCCACTCGAATCAGAAGGCAAATGGGGCGTGCCACCTCCGGTTGAAAACGGATCAGCTAGCAATAATGTAGCAGTAGCTACTTCAGTTGGACTTTCTTCAGATCAAGCACAAAGATGA
Protein Sequence
- >Tp57577_TGAC_v2_gene38602
MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDKHDRSKAVEILVKDLKVFATFNEELFKEITQLLTLENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPNLKNSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFVDHSCGQPNGARAPSPANNPLLGSLPKAGGFPPLGAHGPFQPTPAPVPTQLAGWMSNPTPVAHAAVSGGGTIGLGAPSMPGALKHPRTPPPNLSVDYPSGDSDHVAKRTRPMGITDEVNLPVNVLSAPFPGHGHSQAFNAPDDLPLPKTVMRTLNQGSSPMSMDFHPVQQSLLLVGTNVGDIALWEVGSRERLVSRNFKVWDLSACSMPFQAALVKDPSVSVNRVIWSPDGALFGVAYSRHIVQIYSYHGGEEVRQHLEIDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAASGTKQYTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYDNLGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESSIVEWNESEGAVKRTYQGFRKRSSGVVQFDTTKNRFLAAGDDFSIKFWDMDNIQLLTTVDADGGLPASPRIRFNKEGTLLAVSANDNGIKIIANAEGIRLLRTLENSMYDASRASELAKPTINSMSSAAAATSAALAERASSAAAIAGMNGDARNMGDVKPRITEESNDKSKIWKLTEINEPSHCRSLKLPENVRVNKISRLIYTNSGNAILALASNAIHLLWKWPRNDRNSSGKANASVQPQLWQPSSGILMTNDIADSNPEDSVPCFALSKNDSYVMSASGGKISLFNMMTFKTMTTFMPPPPAATFLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHTKRITGLAFSHVLNVLVSSGADAQICVWNTDGWEKQKTRFLQLPPGRTPSAQSDTRVQFHQDQIQFLVVHETQLAIFEATKLDCLKQWAPRDSSAPISHATFSCDSQLIYASFLDATVCVFNASNLRLRCRINPSAYLPASVSNSNVQPLVIAAHPQEPNQFAVGLSDGGVHVFEPLESEGKWGVPPPVENGSASNNVAVATSVGLSSDQAQR