Information report for Tp57577_TGAC_v2_gene3598
Gene Details
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Functional Annotation
- Encodes a 237-kDA protein with similarity to vertebrate Tpr, a long coiled-coil proteins of nuclear pore inner basket filaments. It is localized to the inner surface of the nuclear envelope and is a component of the nuclear pore-associated steps of sumoylation and mRNA export in plants. Mutations affect flowering time regulation and other developmental processes. Probably acts in the same pathway as ESD4 in affecting flowering time, vegetative and inflorescence development.
Homologous
- Citrullus lanatus: Cla97C09G184470
- Glycine max: Glyma.08G162300, Glyma.15G265300
- Gossypium hirsutum: Gohir.D01G085300, Gohir.A01G100800
- Juglans regia: Jr06_11960, Jr06_11950, Jr06_11970, Jr15_08850
- Manihot esculenta: MANES_16G052800
- Medicago truncatula: Medtr2g063480
- Populus trichocarpa: POPTR_008G080900v3
- Prunus persica: PRUPE_4G125000
- Rosa chinensis: RchiOBHm_Chr5g0023031
- Vitis vinifera: VIT_19s0085g01090
Gene Resources
- Pfam: PF07926
Sequences
CDS Sequence
- >Tp57577_TGAC_v2_gene3598
ATGCCCCTCTTTATCTCCGATGAAGAACTTTCGCGGTTATCCGGCGATACCACCGCCGTAGCCGCTAAAGCCGACGCCTACATCCGCGGCCTCCTCAACGAACTCGACACCGTCCGTGCTAAAGCTGATGCCTCCGACATCAACGCCGAGCAGAATTGCTCTCTCGTTGAGCAGAAGTATCTCTCCCTCTCTTCCGAGTTCTCCAAGCTCGAATCCCATGCCGCCAGCCTCCAATCTTCGCTTGATCAACACCTCCGGGACCTTTCTGATTCCCAAGCGAAGAATCACCAATTTCACTTGCAATTGGTTGAGAAGGATAGAGAGATAGAGAGGTTGAAGACGGAACTGAGTGAGCTGCACAAGTCAAAGAGGCAGTTGATTGAAGTGAATGAACAGAAGGATTTGGAGATTAGTGAAAAGAACACAACCATCAGGAGTTACCTTGATAAGATTGTACATTTGACGGAAAATGCTGCCCAAAAGGAAGCACGCTTTAGTGAAGTTGAGGCAGAATTGGGGAGATGCCGGGCTGCTTGCACTCGTCTCCAGCAGGAGAAGGAGATTGTTGAGAGGCAGAATGCTTGGCTTAATGAGGAGTTGACTGCTAAAATTAACAGTTTCTTAGAGTTGCGCAGAAAACATACAGAATCAGAAACCGATATATCTTCCAAACTTGCAGATGTTGAAAGACAGTTCAGTGAATGCTCTAAATCTCTACAATGGAATAAGGATAGAGTAAGGGAGCTAGAAATGAAGCTTAAGTCTATGCAAGAGGAATTAATATCAGCTAAAGATTCTGCTGCAGCCAACGAAGAGCAATTATCTGCTGAACTTTCAACTGTCAATAAGCTTAATGAGCTCTACAAAGAGAGTTCCGAGGAATGGTCTAGAAAAGCAGCGGACCTAGAGGGTGTTATAAAAGCGATGGAGTCACACCTAAAGCAAGTTGAAGATGACTACAAAGACAGACTTGAGAAGGAATTTTCTGCTAGAAAGCTGTTTGAAAAGGAGGCTGCGGATTTGAAAGAAAAGCTTCAGAAGTGTGAAGCTGATATTGAGAGAACCAAGAAGATGAATGAACTAAGCAATCTTCAACTCACAAGCTTCTCCACTGAACCGTGGCTGACACCTATTGTAGCTGATAACATGGATGTAGAAAATAATGCGCTAATATCAAAAATCCCTGTTGGGGTTTCTGGAACAGCATTAGCTGCTACACTTTTGCGAGATGGGTGGAGTTTGGCAAAGATGTATGCAAAATACCAAGAGGCTGTCGATGCTTTGCGACACGAACAATTGGGAAGGAAGGAGTCAGAGGGAATTTTGCAACGGGTTCTATACGAGTTGGAGGAGAAAGCAGAAGCCATAGAGGATGAGAGAGTGGAACATGAAAAGATGGCCGATGCATACTCTTTGATGAACCAAAAATTGCAAAACTCCCTCAACGAAAATTCTAACTTAGAGAAAACCATCCTGGAACTGAAGGCTGACCTCAAAAGGCATGAACGTGAATATAATCTTGCCCATAAAGAAGTTGATGACCTTCGAAAACAGGTGACAATACTTTTGAAAGAATGCCAAGACATCCAAGTTCGTTGTGGGTCATTTGGTAATAATATCAACGTTAATGTAACCAATACTTCTTTAAGAACAAGTACAAATTCTGAAGCTGACGGTGTCATATCAGAGCACCTTTTAACCTTCAAGGACATTAACGGACTAGTTGAGCAGAATGTCCAACTCAGAAGCCTTGTACGCAGTCTCTCTGGACAGCTTGAAAATCAGGAGGTGGAATTCAAGGAAAAGCTTGAAATGGAACTCAAAAAACATACTGAAGAAGCTGCTTCTAAAGTTGCGGTTGTTCTGCAGAGAGCGGAAGAGCAAGGGCAGATGATTGAATCGCTTCATACTTCTAAAGGTCTAGATCATAGATTAATGGCACATTACCTTATATTGATTCTTTATTTTTCAGTTGCTGCAGAAGTTGGAAGAAACAACATGAATACTTCAAATGAAAGTTCACAGGAGGTTTCTAAGAAGTCTCTTGAAAAAGCTGCAGAGCGTGTAAGATGTCTTGAGGATGATTTAGCAAAGTCTAGGAGTGAGATTATTGTATTACGATCAGAACGTGACAAAATTGCAATAGAAGCAAAATTTGTCAGAGAGCAGCTTGATAGCTTTATGAAGGAATTTGAACACCAGAATGCTGAAGCAAAAGGCATTTTAGCAAGAAATGTGGAGTTTTCTCAGCTAGTTGTCGACTACCAACGGAAATTACGGGAGAGTTCAGAGTCATTGAATGCTGCTGAGGAGTTTTCTCGGAAACTTTCTATGGAGTTGTCGGCATTAAAGAGTGAAAAGGAAGTCTTATCAAATGCCGAAAAGAGAGCATCTGATGAGGTTCGCAATTTATCTGAGAGGGTGTATCGCTTGCAGGGTACGTTGGGTACCATACAAAGTGCTGAAGAAGTTCGAGAGGAAGCAAGAGTTGCTGAAAGGGTAAAACAAGAAGAACATACAAAGCAATTGGAGAGGGAATGGGCTGAGGCCAAGAAAGAGTTACAGGAAGAGAGAGAAAATGTGCGGAGACTTGCGCTTGATCGGGACCAGACCATGAAAAATTCTCTGAGACAGGTTGAGGATATGGGCAAAGAGTTAACTAATGCACTGGGTGCACTTGCGTCTGCAGAATCTAGGGCTGCTGTGGCTGAGGCAAAACTCTCAAGTCTTCAGAAACAAATGGATTCTGCAGATGGGAAGCTTGTCAATATGGATGCAGTGAATGGACCTTCCACTGTATCTAGAGATGAGGTTGTTGCTGAATTGCAAACAGCAAAAGAAGAGATTGAGAAACTGAAAGAAGAAGTACATGCTAACAAAGCGCACATGATGCAGTATAAGAGCATCGCTGAGGTGAATGAAGATGCATTGAAACAAATAGAAAATGCACATGAGGACTACAAGATAGAGGTTGACAATACAAAGAAATCTCTAGAAGCTGAAGTGCATTCACTTAGAGAGAAGGTTTCAGAGCTTGAAAAAGAATCTAGTTTGATATCAGAAGCAGTGGTATCTGCAACTGCTGGAAAGGAAGAGGCTCTGACATCTGCTTTGGCTGAGCTAACAAATCTCAAAGAAGAAATTTTATCGAAAACTTCTCAAATTTCAGAGATGGAAATTCAGATATCTGGATTAAAAGAACACCTGGACAAGGAACATCAGAAATGGCGTTCAGCTCAAACGAATTACGAAAGACAAGTTATTCTCCAGTCAGAGACTATTCAGGAGTTGACTAAAACATCTGAAATGCTAGCTTCATTGCAGGAGGAGGCATCTAAATTACGTAAATTAGCTGATGCTCAGAAAATTGAAAATAATGAACTAAAGGCTAAGTCGGAAGAGGAGAAGGCGAGACTTGAGAAGTCTAAGTATGATGCTGAGAAGAAATACAATGAAATCAACGAACAGAATAAAATCCTACATAGCCAACTTGAGGCATTACATATTCAATGGGCTGAGAAGGAGCGTAATGCTACTGGTATTTCACCTGGAAGTAGTAGTGATACATTTGCTGATGCTGGCCTTCAAAATGTTGTCAATTATCTCCGCCGTTCAAAAGAAATTGCAGAAACAGAGGTTTCGTTGTTAAAACAGGAAAAGCTGCGATTACAGTCACAGCTTGAGGGTGCTTTGAAGGCAGCCGAATCTGCAAATGCATCTCTAGAAGCTCAGCGTGTAAAATCAAGATCATTTATGTTCACTGAAGAAGAATTCAAATCATTACAGCTTCAGGTCAGGGAAATAAACTTGCTTCGTGAGAGTAATATGCAGCTCAGGGAAGAAAATAAGCACAATTTTGAGGAATGCCAGAAATTGCGTGAACTAGCAGAAAAGGCAAGAGCCGAGAAAGACAATCTAGAGAATCTTATAAGGGATAGGGAAATTGAGCTGGAAGGTCATAAAAAAGAGATCGAAACACTAAAAATTGAAAAGGAACATCTCAATCACAAGGTTTCTGAGTTGCTTGAAAGGAGTAAAAATGTTGACGTGGAGGATTATGATCGAGTGAAGAAACTTGTAAGAGATTTGCAGGATAAACTAAGAGATAGGGATGCTCAGATTGAGGACACTGGTAAAATTCTATCAAAAAAACATGAATCTATGTCACGTCTAGAGCAAAACCTTTCAAACTGCAAATTGGAGCTTTTGGAGAAAGAGAAGAGAATTAATGAGTTTCCGAAAATTGAGGCTACCCTAAAACAGGATGCGGAAAGGAATAGGAAAATGCAGGCCCATTTGAAGAAAAGGATTGATGTGTTGTCAAGGGAAAAGGAAGACCTAGTAAAAGAGAATCAGCAACTTTCTAGACAATTAGATGAGATTAAACAAGTGAAAAGATCAACAAGTGATACAACTGGCGAACAAGGAATGAATCATGAAAAGGACACCAGAATACAGATGCTGGAAAAATATGTGGAGAAAGTTAAAGCTGAATTAACTAAAGAGAAGGAAGACAAATCCCTGGAGAAAAATAAACGACTGAAAAGTGAAAAGGCTATAATGGACTCTTACAACATTGTTGAGCATGAGAAAAAACAGTTTCTTAATGAACTTGAGAGGCATAAGGAGGCTCTAAAGCGGTTGTCTGATGAAGTCGAAAAGCTTAAGATTATTGTTGGCAATATTCCTGAGGGAACCAATGTTGCTCAACTTCTTTCGGGATCCATTGTTGATGACATCTCTGCTCCTTATATCTCCGCTGTTGAAAATTTTGAAAAGGAAGCTCATGCAGTATTTGTTGAGTTTGGTGGCCGTGCGACTCTTGGAGATGCATCAACAGTTCCAGATAGTTCAGCAACTGCTACAGGTTCTCTGGTCCATACTCATGTCCCAAACATATTACCCTTGGCCGCCCCTGTAACAAGCAGTTTGCCACTTAAGGCCACTGGAGATAGTGAGAAAAGACCTGGACCTACAAAATCTAGTGTGGAAACTCGTAAAATTGGTAGGAGATTGGTCAGGCCACGACTAGTAAAGCCAGATGAGCCACAAGGTGACACTGAAATGTCTGATGTTGAAGTACTTGGGGGCAACAAGCCTGGACCATCTATTGACACAGAAACCCAAAGCGATTTTGCTTCATCATCTCAACCAGCGGCTCGGAAACAATCTGTTGCACCTGGTGAGAAGAGCTCTGATGTAATAGCACCTTTGTTAAAGAAGCCTAAAGGATCTGAATCTCCAGAAAAGAGTGGCGAAGAACAACCTTCTACAACCCCAGAATTTACTAGCAGTCAGCCAGTTGCTGAAGAATCATTTGAAAGTGGTGAGTTGCCACAAGGCCAAAATGAGGAAGTCAGTGAGGCTCAAAATGATGATGAGACAGATGTTGGGAAGGATGAAGATTCTAAAGATCCACCACACTTGGATGGCACTAGTCAAGATGAATTACAAGCTGACAAGACTGGAATTTCAGAAGAGAACCTGGATCAACCTGCAGAGACAAAAATGGTATCTGATGAGATGCAGAGGGATCATACTGAGATAGACAACCAACAATCAACATTGCCTCTGAATAGTGAGACAGAAGAGGGAGAGTTGTTGCAAGAAGCCGGAGATCCTGAGGGTGGCTGTGATGATGAAAACCAAGAATCTCGGGAGGCAACCCCTGAACCTTCCCCTGCTAGGGGTGATGATGATGCTTTAGAGGCCGGTGAGATTAATTCGCCCGAGGTTTCAAGTGATGATAAGAATGATGAAGGTGACTTGGTTGAGGATGCTGCTGATGGTTCTGATAAATTAGTTGATAACGAACCAATTGCAGTTGAGAGTGATCCAGTAGCTGAGGCTGCACCTGTTGTGAGTGAGAGTAATTTGCAGAGTAGCGTTGGAGAAAGCAGTCCCTCTAAATTACCTGTTTCAAAGCAAGGGACCACCAGTGTCCCCTCTAAAACAGAAGAGGTAAAGCCATCATCACCAATTAGTGATATGTCATCAACTACCATTAATATACACGAGCGAGCCCGACAGATGGCTCAATTAAGACAAGCAGGGCAAGCTGGAACTAGTGTGTTTACCACTGCAGGAAGAGGTCGTGGAAGAGCTCCCCGTGGCCGGCTTCAAAGAGGTCGTGGACGAAGACCACCATCTAGTGATGCATAA
Protein Sequence
- >Tp57577_TGAC_v2_gene3598
MPLFISDEELSRLSGDTTAVAAKADAYIRGLLNELDTVRAKADASDINAEQNCSLVEQKYLSLSSEFSKLESHAASLQSSLDQHLRDLSDSQAKNHQFHLQLVEKDREIERLKTELSELHKSKRQLIEVNEQKDLEISEKNTTIRSYLDKIVHLTENAAQKEARFSEVEAELGRCRAACTRLQQEKEIVERQNAWLNEELTAKINSFLELRRKHTESETDISSKLADVERQFSECSKSLQWNKDRVRELEMKLKSMQEELISAKDSAAANEEQLSAELSTVNKLNELYKESSEEWSRKAADLEGVIKAMESHLKQVEDDYKDRLEKEFSARKLFEKEAADLKEKLQKCEADIERTKKMNELSNLQLTSFSTEPWLTPIVADNMDVENNALISKIPVGVSGTALAATLLRDGWSLAKMYAKYQEAVDALRHEQLGRKESEGILQRVLYELEEKAEAIEDERVEHEKMADAYSLMNQKLQNSLNENSNLEKTILELKADLKRHEREYNLAHKEVDDLRKQVTILLKECQDIQVRCGSFGNNINVNVTNTSLRTSTNSEADGVISEHLLTFKDINGLVEQNVQLRSLVRSLSGQLENQEVEFKEKLEMELKKHTEEAASKVAVVLQRAEEQGQMIESLHTSKGLDHRLMAHYLILILYFSVAAEVGRNNMNTSNESSQEVSKKSLEKAAERVRCLEDDLAKSRSEIIVLRSERDKIAIEAKFVREQLDSFMKEFEHQNAEAKGILARNVEFSQLVVDYQRKLRESSESLNAAEEFSRKLSMELSALKSEKEVLSNAEKRASDEVRNLSERVYRLQGTLGTIQSAEEVREEARVAERVKQEEHTKQLEREWAEAKKELQEERENVRRLALDRDQTMKNSLRQVEDMGKELTNALGALASAESRAAVAEAKLSSLQKQMDSADGKLVNMDAVNGPSTVSRDEVVAELQTAKEEIEKLKEEVHANKAHMMQYKSIAEVNEDALKQIENAHEDYKIEVDNTKKSLEAEVHSLREKVSELEKESSLISEAVVSATAGKEEALTSALAELTNLKEEILSKTSQISEMEIQISGLKEHLDKEHQKWRSAQTNYERQVILQSETIQELTKTSEMLASLQEEASKLRKLADAQKIENNELKAKSEEEKARLEKSKYDAEKKYNEINEQNKILHSQLEALHIQWAEKERNATGISPGSSSDTFADAGLQNVVNYLRRSKEIAETEVSLLKQEKLRLQSQLEGALKAAESANASLEAQRVKSRSFMFTEEEFKSLQLQVREINLLRESNMQLREENKHNFEECQKLRELAEKARAEKDNLENLIRDREIELEGHKKEIETLKIEKEHLNHKVSELLERSKNVDVEDYDRVKKLVRDLQDKLRDRDAQIEDTGKILSKKHESMSRLEQNLSNCKLELLEKEKRINEFPKIEATLKQDAERNRKMQAHLKKRIDVLSREKEDLVKENQQLSRQLDEIKQVKRSTSDTTGEQGMNHEKDTRIQMLEKYVEKVKAELTKEKEDKSLEKNKRLKSEKAIMDSYNIVEHEKKQFLNELERHKEALKRLSDEVEKLKIIVGNIPEGTNVAQLLSGSIVDDISAPYISAVENFEKEAHAVFVEFGGRATLGDASTVPDSSATATGSLVHTHVPNILPLAAPVTSSLPLKATGDSEKRPGPTKSSVETRKIGRRLVRPRLVKPDEPQGDTEMSDVEVLGGNKPGPSIDTETQSDFASSSQPAARKQSVAPGEKSSDVIAPLLKKPKGSESPEKSGEEQPSTTPEFTSSQPVAEESFESGELPQGQNEEVSEAQNDDETDVGKDEDSKDPPHLDGTSQDELQADKTGISEENLDQPAETKMVSDEMQRDHTEIDNQQSTLPLNSETEEGELLQEAGDPEGGCDDENQESREATPEPSPARGDDDALEAGEINSPEVSSDDKNDEGDLVEDAADGSDKLVDNEPIAVESDPVAEAAPVVSESNLQSSVGESSPSKLPVSKQGTTSVPSKTEEVKPSSPISDMSSTTINIHERARQMAQLRQAGQAGTSVFTTAGRGRGRAPRGRLQRGRGRRPPSSDA