Information report for TCM_037410
Gene Details
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Functional Annotation
- Encodes a ribonuclease III family protein that is required for endogenous RDR2-dependent siRNA (but not miRNA) formation.
Homologous
- Actinidia chinensis: CEY00_Acc06637
- Arabidopsis thaliana: AT3G43920
- Citrullus lanatus: Cla97C08G152540
- Gossypium hirsutum: Gohir.A06G080450, Gohir.D06G080000
- Juglans regia: Jr05_05420
- Manihot esculenta: MANES_03G056500
- Oryza sativa: OsDCL3b, LOC_Os01g68120, OsDCL3a
- Prunus avium: Pav_sc0000131.1_g350.1.mk
- Prunus persica: PRUPE_1G401900
- Vitis vinifera: VIT_04s0008g02170
Sequences
CDS Sequence
- >TCM_037410
ATGATGGTTTTAGACAATAATGATCCTGCTAAGGAAGACCCTTCTTCACCTTCAAATCCGAAGGACTTGAACCCCAGAGGGTATCAATTGGAGGTGTATGAAGTTGCAAAGAAGAGAAACATAATAGCAGTGTTGGATACCGGCGGAGGGAAGACAATGATAGCTGTGATGCTCATTAACGATTTTGGTCAAGCTATCAGGTCCTTTGACAATAAAAAGTTGATTATTTTCTTGGCTCCCACTGTTCATCTAGTTAATCAGCAATTTGAATATATAAAACTTCATACAAATCTGGAAGTTGAACAGTATTATGGAGCTAAGGGAGTTGACGAATGGAACGCGGGTTGTTGGAAGAAAGAAATAAAGGAGCATGATGTTCTTGTTATGACACCCCAGATTCTACTGGATGCCTTGAGGAAGGCATTCTTGAGTCTAGAGATGGTGTCCTTAATGATAATAGATGAGTGCCACCGTGCTACTGGCAACCATCCTTATACAAAAATAATGAAGGAATTTTATCACAAATCTAATAACAAGCCAAAGATATTTGGAATGACAGCATCACCTGTCATTAGCAAAGGTGTTTCATCCAGCAGTGATTGTGAGGCTCAAATATCAGAACTTGAAAGTGTTTTGGATTGCTTGATATATACTATTCAAGACAGGACAGAGATGGAAGCATATGTTCCTTCTGCAAAAGAAAGTTGTAGGTTCTATGATCCAACACAATTCTCTAGTTTGGATTTGAAAGCAATGGCAGAAGCCTATTGGTTAAAGATAGATGCTTCATTGTCAAAGTTACAAGGCTCACCACAAACTTCTTTTAAAGACATGGATGATAAGTTGAAGACACTACGAAAGCGATTATCAAATGACCATGCTAAGATTCTGCATTGCCTTGACAATCTTGGTCTAATATGTGCTTATGAGGCTGTTAAAGTCTGTCTGGAGAATATCCCTGACGCCAAAGAGGAGTGTGAAACATATAAAGAAATCATCTTGCAGTGTAAAAATTTCCTTGAGGAAGTGCTACGTATAATTGGGGAGTCTCTTCCCCTTGGTGATGAAAATTTTCTGAATTCTGGGTTTGACTATTTCAAGGCAGTAGATCTTGGCTATATATCTCCAAAACTGCATGAACTACTTCAAGTTTTCCAATCATTTGGAGAAACTAGAGAAGTATTGTGCCTCATTTTTGTTGAAAGAATTGTTACTGCTAAAGTAATTGAAAGATTTGTGAAGAAAGTGACCTATTTGTCACATTTCACGGTTTCATATTTGACTGGAAGTAACACATCAGTTGATTCCCTGGCACCAAAAATGCAAAAGGAAACCTTGGATTCATTTCGATCTGGGAAGGTGAATCTATTATTTGCTACTGATGTGGTTGAGGAGGGAATTCATGTTCCAAACTGCTCCTGTGTGATACGTTTTGACCTGCCCAAGACAGTCCGGAGTTATGTACAATCTCGAGGAAGAGCTAGGCTGAGTAATTCCCAATTCATCATGATGCTTGAGAGGGGAAATGTCCAACAAAGAAATCAACTATATGATATAATCAGGAGTGAATATTCAGTGACAACTACAGCTATTAATAGAGACCCTGATCTATGCCTTCTCAAAAATCCTACAGTCAAAGAAACTAATGTTTATATTGTGGATGCTACTGGAGCTTCAGTTACTGCAGATTCTGCTGTTAGCCTCCTGCAACGATATTGTGAAAAGCTCCCTGGTGATAAGTATTACGTGCCAAAGCCGAGTTTCAAGTTAACATTTTCTGGAGGGTTATACGAGTGTAAATTATTATTACCTGTTAATGCAGCCTTGCAAACAATTGTTGGTCCTCTATCTAGGAATTCTCATTTAGCAAAGCAGCTTGTATGCTTGGAAGCATGTAAGCAGCTTCATCAAATGGGCGCATTGGATGATCATCTTCTTCCAACCATTGAAGAGCCTTCACAAAATCATTGTGTTGCTAAAGGAAAAGATTCAGGTTCAGGTGCAGGAACTACAAAACGGAAGGAACTGCATGGAACAACTTGCATTCATGCATTATCTGGAAGCTGGGGAGAAAAACCTGATGCTGCTGTTTTCTTTGCCTATAAATTTAACTTCTCCTGCAATATCATTAGCGTGGTTTATTCTGGATTTGTTCTTCTAATTGAATCCAAGCTTGCTGATGATGTGGGGAATATTGAATTGGATCTCTACTTGATTCGAAAGATGGTTAAGACTTGTGTCTCTTCATGTGGGCAAGTGCATTTGGATGCAGACCAGATGATGAAAGCAAAGCGCTTTCAGGAATTTTTCTTTAATGGCTTGTTTGGGAGGTTATTTGTTGGATCTAAATCATCTGGAACACGAAGAGAATTTCTACTTCAGAATAAAACAAGCTCTTTGTGGAGTCCCTCCAACATGTATTTGCTTCTACCCCTTGAGGACAGTTTAAGCAATGAATTGAGAATAAATTGGCCAGCAGTAACAGCTTGTACATTTGCTGTAGAATTTTTAAATAAAAATTCTTTGTTAGGCACTGAGCAATCCGATGGTGATGGAGGCAATCTATCATTGAACCGGACTGGTTCATCTGTGACAGAATGCAAGGGGACCAATATAATCCACTTTGCTAACCGTTCAGTTGATGTTAACAATCTTAGGAATATGGTAGTAGTAGCTATTCATACTGGAAGAATCTACTCCATCCTTGAATTAGTGAGCAATACATCTGCTGACAGTTCTTTCAATGAAATTGTTGATTCTGTCTCATCAGAGTTTGCTACCTTCTCTGAATACTTCCATAAAAAGTATGGGATCGTGCTTAAACATCCAGGACAGCCTTTGTTGCTGTTAAAGCAGAGTCATAACCCGCACAACTTGCTTGTGAATTTCAATGATGAAGGTGTTTCAGCTAAGGCATCGCAAGCTGGTTTGGTTAATGAGAAGCCACGGAATCATGTCCACATGCCCCCTGAGCTTTTACTTGTCCTTGATGTTCCAATAGATGTTCTTAAAGCATTTTACTTGCTACCATCATTGATGCACCGGCTGGAGTCCTTAATGTTGGCTAGCCAACTTAGAGAAGAGATCAACTTTCATTCTAGCAACTTCGATATACCAAGCTCATTGATCCTGGAAGCACTAACAACACTTAGATGTTGTGAAAGTTTTTCCATGGAGAGGCTGGAATTGCTTGGGGATTCAGTTCTAAAGTATGCTGTGAGCTGCCACCTCTTTCTTAGATATCCCAAAAACCATGAAGGACAATTATCTGCCAAGCGATCATGGGCAGTTTGTAATTCAACCCTGCATAAGTTGGGAACTGACCGCAGATTACAGGGATACATTAGAGACAGTGCTTTTGATCCCCGTCGTTGGGTAGCTCCAGGGCAACTATCTCTCCGCCCTGTTCCTTGTAAGTGTGGGGTGGACTCTTTAGAAGTTCCTTTAGATAAAAAATTTCAGACTGAAGACCCAAAAGTTAAGGTTGGTAAATCCTGTGATAGAGGCCATCGATGGATGTGTTCTAAAACCATATCGGATTGTGTTGAAGCTCTCATAGGAGCATACTACATTAGTGGTGGACTCATTGCTGCCCTTCATATGATGAAGTGGCTTGGTATTGATGCTGAAGTTGATCCCGCTTTGGTAGTTGAAGCTATTAGATGTGCATCAGTACGAACTTATGTCCCCACTGATGAAATCCACATTATAGAGTTAAAAATGGGCTACAATTTTTCTTCTAAGTTTTTCTTACAGGAGGCCTTGACACATGCATCTGTGGGTGAGTTCTACTGTTACCAGAGGCTTGAATTTCTTGGTGATTCTGTGTTGGACTTGCTGATCACCCAATATCTGTACCACAATCACACTGATATAGATCCAGGAGAATTGACCGACCTGCGCTCAGCTTCGGTTAATAATGAAAGTTTTGCTCAAGTTGCTGTGCGTCATGACCTTCATAAGCATCTTCAACATTGTTCAACTTTATTATCAAACCAAATAAGTGAGTATGTACAGTCCTTCCCTGAATCTCATGACACCATCAGATCAGGTCCAGGCATAAAAGGTCCCAAGGCTCTTGGAGACCTGGTTGAAAGTATTGTTGGGGCAATTTTGATCGATACCAATCTCAATCTCAATGAAGTCTGGAGAATTGTTGAACCACTGTTATCCCCAATTGTGACTCCTGATAAGCTTGAGCTGCCTCCACTTAGGGAACTGAATGAACTATGTGACTCTCTTGGATATTTTATTAAGGAAAAATGTATATATAATGGGGAAATTGTGCATGCCAAGCTTCAATTACAGCTAGATGATATTTTGTTGATTGGAGAGGGGTTTGATCGAATCAGAAAAGTAGCAAAAGGAAAAGCGGCTTCATATTTGTTGAAGGAACTTGAGAACAGGGGAATCTCCCGCAAGAGAAGGAAACAGGGCTGTGCAGATTCAACTCAAACCACTGATGATGATTCATTAGAGCCAACAAACCATAAGAGGCAGAGGAGAGCCAAAATTCAATTGCTTGAAGATTCAACTACAGTTCCTTCCCCAACTCATGATTCTTCAAAGAGAGCATGCAGTACTACCCCTCCCACCCCAGTAATTGCAACAATAAACACAAAGAAAGGAGGACCTAGGACTGCTCTTTTTGAGCTTTGTAAGAAACTGCTATGGCCTATGCCTACATTCACAGCAACTGAACACAAATCAAGTACTCTTGTGGAAATTGGTGAAGGTACTGAAAGGAAAAAGGGCTTTATCAGCTTTGTATCAAATATCACCTTGAATATACCGAGATTCGGCACTATTGAATGCACTGGAGATGCAAGGGCTGACAAAAAAAGTTCATTGGATTCTGCAGCACTGGTTATGCTTTATGAGCTTGAACAGCGGGGGAAGCTCATCATTGGTGAATCCTAA
Protein Sequence
- >TCM_037410
MMVLDNNDPAKEDPSSPSNPKDLNPRGYQLEVYEVAKKRNIIAVLDTGGGKTMIAVMLINDFGQAIRSFDNKKLIIFLAPTVHLVNQQFEYIKLHTNLEVEQYYGAKGVDEWNAGCWKKEIKEHDVLVMTPQILLDALRKAFLSLEMVSLMIIDECHRATGNHPYTKIMKEFYHKSNNKPKIFGMTASPVISKGVSSSSDCEAQISELESVLDCLIYTIQDRTEMEAYVPSAKESCRFYDPTQFSSLDLKAMAEAYWLKIDASLSKLQGSPQTSFKDMDDKLKTLRKRLSNDHAKILHCLDNLGLICAYEAVKVCLENIPDAKEECETYKEIILQCKNFLEEVLRIIGESLPLGDENFLNSGFDYFKAVDLGYISPKLHELLQVFQSFGETREVLCLIFVERIVTAKVIERFVKKVTYLSHFTVSYLTGSNTSVDSLAPKMQKETLDSFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRARLSNSQFIMMLERGNVQQRNQLYDIIRSEYSVTTTAINRDPDLCLLKNPTVKETNVYIVDATGASVTADSAVSLLQRYCEKLPGDKYYVPKPSFKLTFSGGLYECKLLLPVNAALQTIVGPLSRNSHLAKQLVCLEACKQLHQMGALDDHLLPTIEEPSQNHCVAKGKDSGSGAGTTKRKELHGTTCIHALSGSWGEKPDAAVFFAYKFNFSCNIISVVYSGFVLLIESKLADDVGNIELDLYLIRKMVKTCVSSCGQVHLDADQMMKAKRFQEFFFNGLFGRLFVGSKSSGTRREFLLQNKTSSLWSPSNMYLLLPLEDSLSNELRINWPAVTACTFAVEFLNKNSLLGTEQSDGDGGNLSLNRTGSSVTECKGTNIIHFANRSVDVNNLRNMVVVAIHTGRIYSILELVSNTSADSSFNEIVDSVSSEFATFSEYFHKKYGIVLKHPGQPLLLLKQSHNPHNLLVNFNDEGVSAKASQAGLVNEKPRNHVHMPPELLLVLDVPIDVLKAFYLLPSLMHRLESLMLASQLREEINFHSSNFDIPSSLILEALTTLRCCESFSMERLELLGDSVLKYAVSCHLFLRYPKNHEGQLSAKRSWAVCNSTLHKLGTDRRLQGYIRDSAFDPRRWVAPGQLSLRPVPCKCGVDSLEVPLDKKFQTEDPKVKVGKSCDRGHRWMCSKTISDCVEALIGAYYISGGLIAALHMMKWLGIDAEVDPALVVEAIRCASVRTYVPTDEIHIIELKMGYNFSSKFFLQEALTHASVGEFYCYQRLEFLGDSVLDLLITQYLYHNHTDIDPGELTDLRSASVNNESFAQVAVRHDLHKHLQHCSTLLSNQISEYVQSFPESHDTIRSGPGIKGPKALGDLVESIVGAILIDTNLNLNEVWRIVEPLLSPIVTPDKLELPPLRELNELCDSLGYFIKEKCIYNGEIVHAKLQLQLDDILLIGEGFDRIRKVAKGKAASYLLKELENRGISRKRRKQGCADSTQTTDDDSLEPTNHKRQRRAKIQLLEDSTTVPSPTHDSSKRACSTTPPTPVIATINTKKGGPRTALFELCKKLLWPMPTFTATEHKSSTLVEIGEGTERKKGFISFVSNITLNIPRFGTIECTGDARADKKSSLDSAALVMLYELEQRGKLIIGES