Information report for TCM_026816
Gene Details
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Functional Annotation
- encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC.
Homologous
- Actinidia chinensis: CEY00_Acc21486, CEY00_Acc06633
- Daucus carota: DCAR_029800
- Gossypium hirsutum: Gohir.A13G177300, Gohir.D13G183900
- Juglans regia: Jr11_04720, Jr11_04710
- Manihot esculenta: MANES_08G108300
- Populus trichocarpa: POPTR_013G004600v3, POPTR_005G005300v3
- Prunus avium: Pav_sc0001938.1_g050.1.mk
- Prunus persica: PRUPE_6G306700
- Rosa chinensis: RchiOBHm_Chr2g0111311
- Solanum lycopersicum: Solyc01g101020.3
- Solanum tuberosum: PGSC0003DMG400018294
- Vitis vinifera: VIT_14s0060g00580
Sequences
CDS Sequence
- >TCM_026816
ATGGCTGAAAGCCGGAATAGGAATGTCAAGCCTGCAAATGGCAAGCCACCACCGGCTGCCAACACATATGCCATCAACCTGGATAACTTCAGTAAGCGGTTGAAAATTTTATATTCACATTGGAATAAACATAATGCTGATCTGTGGGGTGCTTCAAGTGCTCTTGTCATAGCAACTCCTCCTGTTTCTGAGGATCTGAGGTACCTGAAATCGTCAGCACTAAATATTTGGTTGGTTGGCTATGAATTCCCAGAAACCATTATGGTTTTCTTGAAGAAACAGATCCATTTCTTGTGTAGCCAGAAAAAGGCCTCTTTGCTTGATGTTGTGAAGAAGTCTGCCAGAGAAGCTGTTGGTGTTGAAGTTGTTATTCATGTGAAGGCAAAAGGTGATGATGGAACTGGTCTAATGGATAGCATTTTTCGAGCTATCTATTCTCAGACAAACTCTAGTGATCATGCTGTACCTGTTGTCGGTCACATATCAAGAGAGACACCTGAGGGAAAGTTTTTGGAGACATGGGATGAGAAATTAAAGAATGCAAAATTTGAACTTAGTGATGTAACAAATGGGTTCTCAGACTTGTTTGCTGTCAAAGATGAAACTGAGCTTACAAATGTGAAGAAGGCTGCATTCTTGACTTCATCGGTTATGAGGCAATTTGTGGTGCCCAAACTTGAGAAGGTTATTGATGAGGAGAGGAAGGTTTCCCACTCTGCACTGATGGATGATACAGAGAAGACTATACTAGAACCAGCTCGAATTAAGGTGAAATTGAAGGCAGAGAACATTGATATTTGTTACCCTCCTATTTTTCAGAGTGGAGGGGAGTTTGATCTAAAACCAAGTGCTTCAAGCAATGATGAGAACCTTTACTATGACTCTACCAGTGTAATTATATGTGCCCTTGGGTCTCGATACAACAGCTACTGCTCCAATATTGCTCGAACTTTTCTGATTGATGCCAATTCCTTACAAAGCAAGGCTTATGAGGTTCTCCTTAAAGCTCAAGAAGCAGCCATTGATGCTTTAAAATCTGGCAACAAGGTGAGCTCTGTTTATCAAGCAGCAGTCTCAGTAGTAGAGAAGGATGCTCCTGAATTAGCTGCAAATTTGACCAAAACTGCAGGAACTGGAATAGGTCTTGAGTTTCGTGAGTCAGGGCTTAGTCTTAATGCCAAGAATGATCGAATCTTGAAACCAGGGATGGTATTCAATGTGTCACTTGGTTTTCAGAACTTGCAAACAGAGACAAAGAACCCCAAGACTCAGAAATACTCAGTGTTGCTTGCAGATACCGTCATTGTTGGTGAGAAGGTACCAGATATTTTAACTTCTAAAAGCTCTAAAGCTGTCAAAGATGTCGCGTACTCATTCAATGAAGATGATGAAGAAGAAGAGAAGTTAAAGGTTAAAGCTGAGGATAATGGTAATGACACCTTATTCTCCAAGACAACACTCAGGTCAGACAACCATGAAATGTCTAAAGAGGAGCTACGAAGGCAGCATCAGGCTGAACTTGCTCGCCAGAAGAATGAAGAAACTGCAAGGAGACTTGCCGGTGGGGGTGCTGTGGCAGCAGATAATCGTGGTGCAGTGAAGACTGTTGGTGATTTAATTGCATATAAAAATGTTAATGATCTGCCCCCTCCTAGGGATTTGATGATTCAGGTTGACCAGAAGAATGAAGCTATCCTCTTACCAATTTATGGAAGCATGGTTCCTTTTCATGTGGCTACAGTGAAGAGTGTGTCCAGCCAACAGGACAGTAACCGTACCAGCTACATCAGGATAATATTTAATGTACCTGGCACCCCTTTCAGTCCACACGATGCAAATTCTCTCAAGTTTCAAGGATCAATATACTTGAAAGAGGTTTCATTCCGCTCCAAGGACTCAAGGCATATCATTGAAGTTGTACAGCAGATTAAAACACTCCGCCGGCAAGTTAATTCAAGAGAGTCTGAAAGGGCTGAGAGGGCAACCTTAGTTAGTCAAGAGAGGCTGCAGCTTGCATCAGCCAAGTTCAAGCCAATGAAGTTGCACGATCTATGGATTCGTCCCCCTTTTGGTGGTCGTGGTAGAAAGCTGACAGGTTCACTTGAAGCTCACACGAACGGATTTAGGTATTCTACTTCAAGGCCTGATGAACGTGTTGATGTAATGTTTGGAAACATCAAGCATGCCTTCTTCCAGCCAGCAGAGCGGGAAATGATCACTCTTGTGCACTTTCATTTGCATAATCACATCATGGTTGGTAATAAGAAAACCAAGGATGTGCAATTTTATATTGAGGTGATGGATATAGTTCAGACATTGGGAGGTGGAAAGAGATCTGCCTATGACCCTGATGAGATTGAGGAAGAGCAACGTGAGCGGGACCGAAAGAATAAAATTAACATGGACTTCCAGAACTTTGTGAACCGGGTTAATGATTTGTGGGGGCAGCCCCAATTTAAAGCACTTGACCTTGAATTTGATCAGCCCATGAGAGAGCTTGGCTTCCATGGGGTCCCCCATAAAGCGTCTGCATTTATAGTGCCAACATCAAACTGCCTGGTTGAGCTAATAGAGACACCTTTTGTGGTGATCACCCTAAGTGAGATCGAGATAGTTAACCTTGAAAGAGTTGGTCTTGGGCAGAAGAATTTTGATATGACTATTGTATTCAAGGACTTCAAGCGGGATGTCCTTCGGATTGACTCGATTCCTTCCACATCACTAGATGGCATCAAAGAGTGGCTTAACACGACTGACCTCAAGTATTATGAGAGCAGACTAAATTTGAACTGGAGGCCTATACTGAAAACTATTACTGATGATCCAGAAAAATTCATTGAAGACGGTGGATGGGAATTTTTAAACATGGAAGTCAGCGATTCTGAGTCTGAGAACTCAGAAGAGTCTGACCAAGGGTATGAGCCTTCAGATGTGCAGTCTGACTCAGGATCAGAGGATGAGGATGATGACAGTGAATCATTGGTCGAATCTGAAGATGATGAGGAAGAAGACTCAGATGAAGACTCAGAAGAAGATGAAGGAAAGACATGGGAAGAGTTGGAGAGGGAAGCAAGCTACGCAGACAGAGAGAAAGGAGATGATTCTGACAGTGAGGAAGAAAGGAAGAGGAGAAAGATGAAAGCTTTCGGTAAGGGTCGGGTACCTGATAAGAGAAATCCTGGTGGCAGCCTTCCGAAGAGGGCCAAATTGAGGTGA
Protein Sequence
- >TCM_026816
MAESRNRNVKPANGKPPPAANTYAINLDNFSKRLKILYSHWNKHNADLWGASSALVIATPPVSEDLRYLKSSALNIWLVGYEFPETIMVFLKKQIHFLCSQKKASLLDVVKKSAREAVGVEVVIHVKAKGDDGTGLMDSIFRAIYSQTNSSDHAVPVVGHISRETPEGKFLETWDEKLKNAKFELSDVTNGFSDLFAVKDETELTNVKKAAFLTSSVMRQFVVPKLEKVIDEERKVSHSALMDDTEKTILEPARIKVKLKAENIDICYPPIFQSGGEFDLKPSASSNDENLYYDSTSVIICALGSRYNSYCSNIARTFLIDANSLQSKAYEVLLKAQEAAIDALKSGNKVSSVYQAAVSVVEKDAPELAANLTKTAGTGIGLEFRESGLSLNAKNDRILKPGMVFNVSLGFQNLQTETKNPKTQKYSVLLADTVIVGEKVPDILTSKSSKAVKDVAYSFNEDDEEEEKLKVKAEDNGNDTLFSKTTLRSDNHEMSKEELRRQHQAELARQKNEETARRLAGGGAVAADNRGAVKTVGDLIAYKNVNDLPPPRDLMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQQDSNRTSYIRIIFNVPGTPFSPHDANSLKFQGSIYLKEVSFRSKDSRHIIEVVQQIKTLRRQVNSRESERAERATLVSQERLQLASAKFKPMKLHDLWIRPPFGGRGRKLTGSLEAHTNGFRYSTSRPDERVDVMFGNIKHAFFQPAEREMITLVHFHLHNHIMVGNKKTKDVQFYIEVMDIVQTLGGGKRSAYDPDEIEEEQRERDRKNKINMDFQNFVNRVNDLWGQPQFKALDLEFDQPMRELGFHGVPHKASAFIVPTSNCLVELIETPFVVITLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLNTTDLKYYESRLNLNWRPILKTITDDPEKFIEDGGWEFLNMEVSDSESENSEESDQGYEPSDVQSDSGSEDEDDDSESLVESEDDEEEDSDEDSEEDEGKTWEELEREASYADREKGDDSDSEEERKRRKMKAFGKGRVPDKRNPGGSLPKRAKLR