Information report for TCM_025381
Gene Details
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Functional Annotation
- Encodes a protein with several WD40 repeats at the C-terminus and predicted protein-protein interaction domains at the N-terminus. Together with the TOPLESS-RELATED PROTEINS (TPRs), it is thought to be involved in transcriptional repression of root-promoting genes in the top half of the embryo during the transition stage of embryogenesis. It can also interact with IAA12 through the EAR domain of IAA12 and the CTLH domain of TPL. The ability of IAA12 to repress transcription is diminished in a tpl-1 mutant background.
Homologous
- Gossypium hirsutum: Gohir.A08G223200, Gohir.D08G243400
- Juglans regia: Jr13_27780, Jr16_02560, Jr13_27790
- Manihot esculenta: MANES_09G124300
- Musa acuminata: Ma04_g12340, Ma01_g08850, Ma04_g11560
- Nicotiana attenuata: A4A49_21987
- Oryza sativa: OsTPL;ASP1
- Populus trichocarpa: POPTR_013G081300v3
- Prunus persica: PRUPE_2G324300
- Rosa chinensis: RchiOBHm_Chr1g0383911
- Sesamum indicum: SIN_1013829
- Solanum lycopersicum: Solyc08g076030.3
- Vitis vinifera: VIT_16s0039g02410
Gene Resources
- Pfam: PF00400
Sequences
CDS Sequence
- >TCM_025381
ATGTCTTCCTTAAGTAGGGAGCTGGTGTTTTTGATCTTACAGTTCCTGGATGAGGAAAAGTTCAAGGAAACTGTTCATAAGTTAGAGCAAGAGTCTGGCTTTTTCTTCAATATGAAACATTTTGAGGATCAAGTCCAGGCTGGTGAATGGGATGAAGTTGAGCGTTATCTATGTGGGTTCACTAAGGTTGAGGATAACCGCTACTCGATGAAGATTTTCTTTGAAATTAGGAAGCAGAAGTATTTGGAAGCCCTTGACAGGCAGGATCGAGCAAAGGCTGTTGAAATTCTTGTCAAGGATCTGAAGGTTTTTGCATCTTTTAATGAAGAACTTTTCAAGGAGATTACCCAGTTGCTCACTCTTGATAACTTTAGGCAAAATGAGCAGCTTTCAAAATATGGAGACACGAAATCTGCTCGAAATATCATGCTTGTAGAACTTAAGAAGCTCATTGAAGCAAATCCTTTATTTCGTGATAAGCTTACATTCCCTGCCTTTAAAAGTTCACGGCTAAGGACCTTAATAAACCAGAGTCTAAATTGGCAGCATCAGCTTTGCAAGAATCCTCGTCCAAACCCTGACATTAAAACTCTCTTTACGGATCATTCTTGTTCTCCCAGTACTAATGGGGCTCGTCCTCCTCCTCCTACTAATAGTCCCCTTGTGGGCCCAATTCCCAAGGCTGGGGCATTCCCTCCTATTGGCGCCCATGGTCCATTTCAGCCTGTTGTTTCCCCATCTTCTGGTGCCATTGCGGGGTGGATGTCAAGTGGTAATCCTTCTTTACCTCATGCAGCAGCTGTGGCAGCTGGGCCTCCTGGTCTTGTCCAGCCTTCTAGTGCAGCTGCATTCCTGAAGCACCCAAGGACGCCATCAGGTATGCCGGGGATGGATTATCAGTCGGCTGATTCAGAGCAGTTGATGAAGCGTATTCGCACTGGCCAATCTGATGAGGTATCCTTTGCTGGTATAGCACATACTCCCAATGTCGACTCACAAGATGACCTTCCAAAAACTGTCGTGCGGGCCCTTAATCAAGGAACTAATGTCATGAGCATGGACTTTCATCCTCAACATCAAACTATTCTCCTAGTTGGCACGAATGTCGGTGACATCAGCCTTTGGGAAGTAGGATCTCGGGAAAGATTGGCTGATAAACCTTTCAAGGTTTGGGATATCTCGACTGCTTCTATGCCATTGCAGACAGCACTAGTGAATGATGCAGGGATATCAGTAAATCGATGTGTATGGTCGCCCTCTGACGGACATATGCTTGGTGTTGCATTTTCAAAGCATATAGTCCAGATATATCTATACAATCCAACTGGAGAATTAAGGCAGCATTTGGAGATTGATGCCCATGTTGGAGGTGTTAATGACATAGCGTTTGCTCAACCCAACAAGCAATTATGTATTGTTACATGTGGTGATGATAAGATGATTAAGGTATGGGACACAGTAGCTGGACGTAGGCATTATATGTTTGAAAGCCATGAAGCTCCTGTGTATTCTGTTTGCCCTCATTATAAAGAAAATATTCAGTTTATCTTTTCCACTGCCATTGATGGGAAGATAAAAGCTTGGTTATATGATTGCTTGGGATCTAGAGTGGACTATGATGCTCCTGGACAATGGTGCACCACAATGGCATACAGTACTGATGGAACTAGGCTTTTTTCTTGTGGAACAAGTAAAGAAGGTGAATCCCATTTAGTTGAGTGGAATGAGAGTGAAGGAGCTATCAAAAGAAGATATGCTGGTTTTAGGAAGCGTTCTTTAGGAGTTGTCCAATTTGATACAACAAGGAACAGGTTCTTAGCAGCTGGTGATGAATTCCAGATTAAGTTTTGGGACATGGATAATACTACCATGTTGACGGCTGTTGATGCAGATGGTGGTTTGCCTGCTAGTCCCAGACTTAGATTCAACAAGGAAGGGTCATTATTGGCAGTTACAACTAGCGATAATGGTATCAAAATCTTGGCCAACAGTGATGGTTCACGCTTGATAAGGATGTTGGAGAGCAGGGCTGTCGATAAAATTCGAGGTCCTTCTGAACCTGTCAACTCTAAGCCGTTGATTGTCAATGCTCTAGGTCCCATGGGGAATGCTGCCATTGCTCCAGCCCTTGAACGCCCAGACAGAGGCCCCCCTGTTGTATCTATAACCAGTCTTAGTACGATGGATAGCAGCAGGCTTGTTGATGTTAAACCACGAATTTCAGATGATGCAGACAAGATTAAGGGCTGGAGAATACCTGACATTATGGATCCATCTCACCTGAAAGCCTTGCGATTACCTGATGCCATAACAGCAGGAAAGGTTGTGAGGCTGCTGTATACCAACTCTGGTCTTGCTCTTTTGGCCCTTGCGTCAAATGCTGTTCACAAGCTTTGGAAATGGCAACGTAGTGACAGGAATCCATCCGGCAAGGCTACTGCAAATGTTGCACCACAATTATGGCAGCCACCTAGTGGTACTCTTATGACAAATGATATAAATGACACTAAACCTGCTGAAGAGTCAGCTACATGCATTGCATTATCTAAAAATGATTCTTATGTTATGTCCGCATCGGGCGGGAAGGTGTCTTTGTTCAACATGATGACATTCAAGGTGATGACCACATTTATGTCCCCCCCTCCTGCAGCCACGTATTTGGCATTTCATCCCCAAGATAATAATATTATTGCTATTGGCATGGAAGATTCCACTATTCAAATTTACAATGTCAGAGTTGATGAGGTGAAAACCAAACTCAAGGGCCACCAGAATCGGATAACAGGACTTGCCTTCTCCCAAACTTTGAATTCTCTGGTGTCTTCAGGGGCTGATGCACAGTTATGTGTTTGGAGCATCGATGGTTGGGAGAAAAAGAAATCAAGGTTCATACAGGCACCATCTGGTCGTCAATCTCCACTATCAGGAGAAACCAAAGTCCAGTTTCACAATGATCAAACTCATCTATTGGTTGTCCATGAAAGCCAAATAGCCATCTATGATAGCAAGCTTGAATGTTTGTGCTCTTGGTCTCCAAAGGATTCACTCAGTGCTCCCATTTCAAGTGCTATATATTCCTGTGATGGCTCACTGATTTATGCTGGTTTTTGTGATGGTGCTGTTGGAGTTTTTGATTCAGATAACTTGAGGCTCAGATGTCGAATAGCACCTTCTGCTTACATACCTTCTTTCTCTGTCAGCAGCAACAGCGCGTATGCTGTGGTGATAGCTGCTCATCCATCTGAGCCTAACCAGATCGCGCTTGGCATGAGTGATGGAGCAGTACATGTAGTGGAACCCTCTGATGTAGAACTGAAATGGGGTACAGCACCCTCTCAAGATAATGGGCCCCTTCCTTCTAGTTCATCAAATCCTTCCTTAAGCGGTCAACCAACAGAGCTACCTTCTAGGTGA
Protein Sequence
- >TCM_025381
MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKHFEDQVQAGEWDEVERYLCGFTKVEDNRYSMKIFFEIRKQKYLEALDRQDRAKAVEILVKDLKVFASFNEELFKEITQLLTLDNFRQNEQLSKYGDTKSARNIMLVELKKLIEANPLFRDKLTFPAFKSSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFTDHSCSPSTNGARPPPPTNSPLVGPIPKAGAFPPIGAHGPFQPVVSPSSGAIAGWMSSGNPSLPHAAAVAAGPPGLVQPSSAAAFLKHPRTPSGMPGMDYQSADSEQLMKRIRTGQSDEVSFAGIAHTPNVDSQDDLPKTVVRALNQGTNVMSMDFHPQHQTILLVGTNVGDISLWEVGSRERLADKPFKVWDISTASMPLQTALVNDAGISVNRCVWSPSDGHMLGVAFSKHIVQIYLYNPTGELRQHLEIDAHVGGVNDIAFAQPNKQLCIVTCGDDKMIKVWDTVAGRRHYMFESHEAPVYSVCPHYKENIQFIFSTAIDGKIKAWLYDCLGSRVDYDAPGQWCTTMAYSTDGTRLFSCGTSKEGESHLVEWNESEGAIKRRYAGFRKRSLGVVQFDTTRNRFLAAGDEFQIKFWDMDNTTMLTAVDADGGLPASPRLRFNKEGSLLAVTTSDNGIKILANSDGSRLIRMLESRAVDKIRGPSEPVNSKPLIVNALGPMGNAAIAPALERPDRGPPVVSITSLSTMDSSRLVDVKPRISDDADKIKGWRIPDIMDPSHLKALRLPDAITAGKVVRLLYTNSGLALLALASNAVHKLWKWQRSDRNPSGKATANVAPQLWQPPSGTLMTNDINDTKPAEESATCIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMSPPPAATYLAFHPQDNNIIAIGMEDSTIQIYNVRVDEVKTKLKGHQNRITGLAFSQTLNSLVSSGADAQLCVWSIDGWEKKKSRFIQAPSGRQSPLSGETKVQFHNDQTHLLVVHESQIAIYDSKLECLCSWSPKDSLSAPISSAIYSCDGSLIYAGFCDGAVGVFDSDNLRLRCRIAPSAYIPSFSVSSNSAYAVVIAAHPSEPNQIALGMSDGAVHVVEPSDVELKWGTAPSQDNGPLPSSSSNPSLSGQPTELPSR