Information report for TCM_000647
Gene Details
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Functional Annotation
- Encodes the putative catalytic subunit of the DNA polymerase alpha. Interacts with genes involved in chromatin-mediated cellular memory. ICU2 genetically interacts with TERMINAL FLOWER2, the ortholog of HETEROCHROMATIN PROTEIN1 of animals and yeasts, and with the Polycomb group (PcG) gene CURLY LEAF. A number of regulatory genes were derepressed in the icu2-1 mutant, including genes associated with flowering time, floral meristem, and floral organ identity. Mutant has curled, involute leaves and causes early flowering.
Homologous
- Beta vulgaris: BVRB_008590
- Citrullus lanatus: Cla97C02G038060
- Cucumis melo: MELO3C020860
- Cucumis sativus: CsGy2G013890
- Daucus carota: DCAR_025744
- Gossypium hirsutum: Gohir.D11G200300, Gohir.A11G193200
- Juglans regia: Jr07_01860
- Manihot esculenta: MANES_13G122900
- Nicotiana attenuata: A4A49_13777
- Populus trichocarpa: POPTR_007G045300v3
- Prunus avium: Pav_sc0000071.1_g470.1.mk
- Prunus persica: PRUPE_7G131600
- Rosa chinensis: RchiOBHm_Chr2g0117021
- Sesamum indicum: SIN_1004856
- Vitis vinifera: VIT_07s0031g00470
Sequences
CDS Sequence
- >TCM_000647
ATGGGTGACGATCAGCCAATAGATCAACCAACAGCCAACGGCAGTCGTCGCCGAGGCCGAGGCGCAGAGGCAGAGAAGCGCGCGGAAGCCCTAGAACGCCTGAAAGCCTTCCGTCAGGGAGAGCGTCGCTCTGCCGCCTCCGAACCTGCTTCCTACGTGAAGCTCGATGAGCCGATCATCGAGTATGTGGACAACGACCAGTACAAAGAGGTCCTGAACAAGCGCCGGAAAGAGGCCGCGGATTTCATCGAGGCCGACGAGGCAAACGGAGATTTCGGCTACCTCGACGATGGTGGCGAAGACGAATGGAGTCAGCCGGCTCATTATCTTTCGTCCGGTGATGACGAATCTGATGGCGAAAGATATTCGAGGGGAAAAAAGGTGAAAAAAAAGGAAAAAAGGGACAACAACAACAATAGTAACAGAGTAAGCAAAAGTAGCGCCGCATTATCGGCGGCGGCGGCAATGATGGGGAAACAGAGGGTTTCTTCGATGTTTACTTCATCGGCTTTTAATAAGAAGGGTAAAGAAACTGATAAGGTGAAATGCGAAAGCATCGTTGATGATGTGATCAAGCAGTTTGCCCCTGATGAATCTGATAGGGAACGCCGTAGGCGAGGGCAAATCAGTCATTTGGCTTCAGTTCGGCCCTCCAAAGTGGTTTCCACGGTAGTTCATCCCGTTAGGAGTGAAGATGAGTTAGTTAGGATAAATAAAGGTTTGGAGGAATTTGTCGAGGAGGATAAGTATCCTGAGAACAATGAAGGAGCAATTCTGGAATTTAATGACACCAAGGTTAAGGAAGTGGAGGCCGAGGTTGAGATGAAGGTGGAGGTGGTGGGGGAGAGGAAGGAGGAGAAGGAGGATAAGGAGGGAAGCGTGCATAAGTTGAATGCGAAAATTTCGGAGGAGAAGAAGGATGAGGCTTTGAGTGCAATGGCGGGGTGGAAGGCGGTGAAGAGTGAAGGGAATGGCAATCTGGGTGGTTCTGTGGAAGGGAACACTGGCTTTAGTGGTGAAGGACAGTCGGAGTTTGAGCTGGACATGGATAGTTCATTGCCTTTTTACATAATTGATGCTCACGAGGAGTTTTATGGGGCTAATATGGGTACTCTTTATCTGTTTGGGAAGGTCAAAGTTGGGAATGAATACCAAAGTTGCTGTGTCGTTGTAAAGAACATGCAGAGATGTGTTTATGCAATCCCAAATAATTCTGTATTTCACAATGATGAGATGGTGAAACTTGAGAAAGATGGGGAAGAGTCCAAGATTTCTTCTTCTGGTTTCCGAACAAAGCTTCATGATGTGGCATCAGGATTGAAGAATGAAGTTGCAAAACACTTGTTAAATCTTAATGTTTCAAGTTTTACCATGGCCCCGGTTAAGAGGCGATATGCTTTCGAGAGATCTGACATACCTGTTGGGGAGAATTATGTGCTCAAGATTAACTATCCATTCAAGGATCCACCACTTCCAGCAGATCGGAAAGGAGAAACGTTCTGTGCTTTGCATGGGACTTGCAGCAGTGCATTGGAGCTTTTCCTTGTTAAAAGGAAGGTGAAGGGGCCTTCTTGGCTGTCAGTTTCAAATTTTTCTACATGTTCGGCTTCTCAGAGGATCAGCTGGTGCAAGTATGAGGTTATTATTGACTCGCCCAAAGATATTAGGATTTCATCTTCATCAAAGAGCACGACAGAAATTCCCCCTATTGTTGTTTCAGCTATAAATTTGAAGACTATCATCAACGGGAGGCTGAATATAAATGAAGTAGTCTCAGCATCCATTATCTGCTGTCGCAGAGCTAAGATAGACACTCCTATGTTGGCTTCAGAATGGAAGAAGCCTGGTCTCCTCAGCCACTTTACTGTTGTCCGCAAACTTGATGGAGGCATTTTTCCAATGGGGTTTACCAAAGAGGTGACAGATAAAAACTCGAAAGCTGGATCAAATGTTTTAGTCTCTGAAAGCAGTGAAAGAGCTTTATTAAATCGGCTGATGATTGAGTTATACAAGTTGGACAGTGATGTTCTTGTCGGACATAATATATCTGGGTTTGACCTGGATGTTCTCCTGCACAGAGCCCAGGCTTGCAAAGTACCAAGCAGTATGTGGTCCAAAATTGGCCGTCTGAAGCGTTCTATGATGCCCAAGTTAACAAAAGGAAGCACCATCTTCGGGTCTGGAGCAAGCCCAGGGATCATGTCATGCATTGCTGGTCGTCTTTTATGTGATACATATTTGTGTTCCCGTGACTTGTTAAAAGAGGTTAGCTATTCTTTGACACAACTGTCAAAGACTCAGCTAAACAAAGACCGCAAGGAGATTGCTCCACACGATATTCCCAGAATGTTCCAAACATCTGAATTGCTCATGGAACTTATTGAATATGGTGAGACTGATGCATGGTTATCTATGGAACTCATGTTTCATCTGAGTGTTCTTCCCCTTACTCGCCAGCTGACCAATATCAGTGGTAATCTTTGGGGAAAGACTCTCCAGGGTGCTAGGGCACAAAGAGTAGAGTATCTTTTATTGCATGCATTTCATGCAAAAAAGTACATTGTCCCAGACAAGTCTTCATCTTACACAAAGGAAACAAAAGTTTCAAAAAAGAGAATAAATGACGGGGTTGGGGAGGGAAATGTAGATGAGGTGGATAACAATGATGTGAATTTTGATGAAACTCACAATGACCGCGGAAAAGGGAAAAAAGGTCCTGCGTATGCTGGTGGATTAGTTTTGGAGCCAAAAAGAGGTCTATATGACAAGTATGTGTTGCTCCTGGATTTCAACAGTCTCTACCCTTCCATTATTCAGGAATACAATATATGCTTCACAACAGTTGAAAGGTTTCCAGATGGATCAGTTCCTCGTTTGCCATCTAGTAAAACAACTGGAGTTCTACCTGAGTTGCTGAAAAATTTGGTTCAGAGAAGGAGAATGGTAAAGTCATGGATGAAAAATGCATCTGGTATTAAGGTCCAGCAACTTGATATTCAGCAGCAGGCACTCAAGCTCACTGCAAATAGTATGTATGGATGCCTTGGGTTTTCTAATTCGAGATTTTACGCAAAGCCTCTTGCAGAGCTTATTACACAACAAGGAAGGGAGATTCTTCAAAGCACTGTTGATCTTGTTCAGAATAATTTAAACTTGGAGGTAATTTATGGAGACACCGATTCAATAATGGTTTACAGCGGACTAGATGATATTGCAAAAGCAAAAACAATTGCAGGAAAAGTCATCCAAGAGGTAAATAAAAGGTATAAGTGTCTAGAAATTGATCTTGACGGTCTGTACAAGAGAATGCTGCTTCTGAAGAAGAAAAAGTATGCAGCTGTAAAGGTGCAGTTCAAGGATGGGACACCATATGAGGTTATTGAACGCAAAGGTCTTGATATGGTTCGTCGTGACTGGAGCTTACTGTCTAAGGAATTGGGAGATTTCTGCCTTGGTCAAATCTTGTCTGGAGGGTCTTGTGAGGATGTTGTTGAGTCAATACATAACTCTCTCATGAAGTCACAGGAAGAAATGAGGAATGGACAAGTAGCACTTGAGAAATACATCATCACAAAAACATTGACTAAACCACCTGAAGCCTATCCTGATGCCAAAAATCAACCGCACGTTCAGGTGGCTCTGAGATTGAAGCAAAGTGGTTATTCTACTGGTTGCTCAGCTGGTGATACAATTCCATACATAATTTGCTGTGAACAGGGGACTAGTTTGAGTAATTCGGCAGGGATTGCTCATCGTGCCAGGCATCCTGATGAGTTGATAAAAGATGAGGGGAAATGGATGATCGACATTGATTACTACTTGTCACAGCAGATCCATCCAGTGGTATCCCGTTTATGTGCTTCAATTCAAGGAACAAGCCCAGAGCGGTTGGCTGATTGTTTAGGACTTGACCCATCCAAGTTTCAAAGTAAATCAAGTGAAGCAGTCAGCAATGACCCAGTTAGTTCGTTCTTGTTTGCTGTAGATGATAATGAGAGATATCAGGGTTGTGAGCCATTGACCTTGTCATGTCCAAGCTGTTCAGGTACTTTTGACTGCCCTGCTGTATTTAGTTCCGTTTGTATGTTAACTGGTGAGAAGCCAACAAAGCTGCAACAAGAGGAATCTACCTGCAATTTTTGGCTCAAGCTGCGCTGCCCTAAATGTCCTGCCGAAGGTGATCTCGGTAGAATATCTCCTGGAATGATAGCAAACCAGGTCAAAAGGCAAGTGGATGGGTTTATTTCAAGGTACTACAAGGGCTTAATGATGTGTGACGATGAAACTTGCAAGCACACAACTCGAAGTCTGAACCTGCAGTTGGTTGGTGATTCTGAGAAAGGAACAGTTTGTCCAAACTATCCCCGCTGCAACGGGCGTCTTGTGAGAAAGTACACTGAAGCAGATCTATACAAGCAACTTTCATATTTCTGTCATCTCTTGGATACCACAAGCTGCATAGAAAAGATGGAGACCAGTGCGAGGATACCGCTAGAGAAAGAGTTAGCCAAAGTTCGGCCACTGGTTGATTTGGCTGCATCTACAGTTCAAAGAATTCGAGACCGATGTGCCTTTGGTTGGGTGCGGATGATTGACCTCATTATCGCAGTTTGA
Protein Sequence
- >TCM_000647
MGDDQPIDQPTANGSRRRGRGAEAEKRAEALERLKAFRQGERRSAASEPASYVKLDEPIIEYVDNDQYKEVLNKRRKEAADFIEADEANGDFGYLDDGGEDEWSQPAHYLSSGDDESDGERYSRGKKVKKKEKRDNNNNSNRVSKSSAALSAAAAMMGKQRVSSMFTSSAFNKKGKETDKVKCESIVDDVIKQFAPDESDRERRRRGQISHLASVRPSKVVSTVVHPVRSEDELVRINKGLEEFVEEDKYPENNEGAILEFNDTKVKEVEAEVEMKVEVVGERKEEKEDKEGSVHKLNAKISEEKKDEALSAMAGWKAVKSEGNGNLGGSVEGNTGFSGEGQSEFELDMDSSLPFYIIDAHEEFYGANMGTLYLFGKVKVGNEYQSCCVVVKNMQRCVYAIPNNSVFHNDEMVKLEKDGEESKISSSGFRTKLHDVASGLKNEVAKHLLNLNVSSFTMAPVKRRYAFERSDIPVGENYVLKINYPFKDPPLPADRKGETFCALHGTCSSALELFLVKRKVKGPSWLSVSNFSTCSASQRISWCKYEVIIDSPKDIRISSSSKSTTEIPPIVVSAINLKTIINGRLNINEVVSASIICCRRAKIDTPMLASEWKKPGLLSHFTVVRKLDGGIFPMGFTKEVTDKNSKAGSNVLVSESSERALLNRLMIELYKLDSDVLVGHNISGFDLDVLLHRAQACKVPSSMWSKIGRLKRSMMPKLTKGSTIFGSGASPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTQLSKTQLNKDRKEIAPHDIPRMFQTSELLMELIEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKYIVPDKSSSYTKETKVSKKRINDGVGEGNVDEVDNNDVNFDETHNDRGKGKKGPAYAGGLVLEPKRGLYDKYVLLLDFNSLYPSIIQEYNICFTTVERFPDGSVPRLPSSKTTGVLPELLKNLVQRRRMVKSWMKNASGIKVQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITQQGREILQSTVDLVQNNLNLEVIYGDTDSIMVYSGLDDIAKAKTIAGKVIQEVNKRYKCLEIDLDGLYKRMLLLKKKKYAAVKVQFKDGTPYEVIERKGLDMVRRDWSLLSKELGDFCLGQILSGGSCEDVVESIHNSLMKSQEEMRNGQVALEKYIITKTLTKPPEAYPDAKNQPHVQVALRLKQSGYSTGCSAGDTIPYIICCEQGTSLSNSAGIAHRARHPDELIKDEGKWMIDIDYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDPSKFQSKSSEAVSNDPVSSFLFAVDDNERYQGCEPLTLSCPSCSGTFDCPAVFSSVCMLTGEKPTKLQQEESTCNFWLKLRCPKCPAEGDLGRISPGMIANQVKRQVDGFISRYYKGLMMCDDETCKHTTRSLNLQLVGDSEKGTVCPNYPRCNGRLVRKYTEADLYKQLSYFCHLLDTTSCIEKMETSARIPLEKELAKVRPLVDLAASTVQRIRDRCAFGWVRMIDLIIAV