Information report for Tc09v2_g024020
Gene Details
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Functional Annotation
- Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells.
Homologous
- Actinidia chinensis: CEY00_Acc30068
- Capsicum annuum: T459_28656
- Citrullus lanatus: Cla97C02G048110
- Cucumis sativus: CsGy6G012460
- Glycine max: Glyma.12G087000
- Gossypium hirsutum: Gohir.A05G082500, Gohir.D05G085400
- Juglans regia: Jr14_17170
- Manihot esculenta: MANES_04G006100
- Medicago truncatula: Medtr4g054980
- Nicotiana attenuata: A4A49_19906
- Populus trichocarpa: POPTR_004G185700v3
- Prunus persica: PRUPE_6G124200
- Rosa chinensis: RchiOBHm_Chr5g0054631
- Solanum lycopersicum: Solyc11g067140.2
Sequences
CDS Sequence
- >Tc09v2_g024020
ATGAACGGCGGAGATAACCGACGGCGGGACCGCCGAGACCTTCGAAGCTCGAAGAAGCAGAAGAAGCTGATCCGCAGCGCAGAAGAGGAGCTCGAGTCCAAGCTCGGCTTCGATCTCTTCTCCGAAGGGGAAAAGCGCCTCGGATGGTTACTTACTATCGCTTCCTCATCTTGTGAGGATGCGGATACAGGAAAAGTATATAGCTGCGTTGATCTTTATTTTGTTTCTCAGGATGGCTCTTGTTTTAAGTCAAAGTTCAAATTTCGTCCTTACTTTTACGTGGCTGCGAAGGACAGAGCAGAAATGGATGTGGAAGCATATTTGAGACGACGTTATGAAAGTCAGATTGCAGAGATTGAAATTGTGGAGAAGGAAGATCTTGATCTTAAAAACCATTTGTCTGGTCTACACAAACGTTATTTAAAAATAGCTTTTGATACTGTTCAACAATTGATGGACGTAAAGAAAGATCTAGTGCATGTTGTTGAAAGAAACCAGGCAAAATTTGAAGCTGCTGAAGCATATGAGTCGATATTAATAGGGAAAAGAGAACAAAGACCTCTAGATTTTTTAGATTATATAGTTGATCTCCGTGAGTTTGATGTTCCCTACCATGTTCGCTTTGCCATTGACAATGATGTGAGATGTGGGCAGTGGTATGATGTCAGTGTATCCAGTACAGGAGTCATGCTAGAGAAGAGGACTGATCTTCTGCAACGTGCTGAAGTACGTGTCTGTGCATTTGATATTGAGACGACAAAGCTTCCGTTGAAATTTCCAGATGCTGAGTATGATTTAATAATGATGATATCATACATGGTTGATGGACAAGGATACCTGATTATTAACAGAGAGTGTGTAGGGCAAGATATAGAGGACTTGGAGTATACTCCAAAACCGGAATTTCAAGGGTATTTCAAAGTCACAAATGTGAAAAATGAGGTAGAACTTCTTCGGCAGTGGTTTGCTCACATGCAAAAGGTGAAGCCTGGTATTTTTGTCACATATAATGGTGATTACTTTGACTGGCCATTCATAGAAAGCAGAGCTGCTTATCATGGGTTTAAAATGAGTGATGAGGTAGGATTTCGATGTGACAAGAATCAGGGGGAATGTCGAGCCAAATTTGCTTGTCATTTGGATTGTTTTGCTTGGGTCAAACGTGATAGTTATCTTCCTCAGGGGAGCCATGGCCTAAAGGCTGTTACAAAGGCAAAGCTGGGTTATGATCCACTGGAGGTGAATCCAGAGGATATGGTTCGATTTGCAAAGGAAAAGCCCCAGATGATGGCCTCCTATTCTGTTTCCGATGCTGTTGCAACTTACTACTTGTATATGACCTATGTTCATCCCTTTATTTTCTCTCTGGCGACTATTATTCCCATGCCGCCCGATGAGGTTTTGCGCAAAGGAAGTGGGACACTTTGTGAAATGCTTCTAATGGTGCAGGCTTACAAGGCAAATGTTATCTGTCCTAACAAACACCAAACTGACCCTGAGAAGTTCTATAAGAATCACCTACTTGAGAGTGAGACCTATATAGGTGGCCATGTGGAATGCCTTGAAAGTGGCGTCTTCAGATCTGATCTTCCAACTAGTTTTAAGCTTGATCCATCTGCCTATGAGCAACTTATCAGTAATCTTGATCGGGATCTACAATATGCTATTAGAGTTGAGGGGAAGATGGATTTGGAATCAGTCTCTAATTATGATGAAGTAAAGAATGAAATAATAGAAAAGCTTGTAAAGTTGCGAGATGAACCTATCCGTGAAGAATGTCCTCTCATTTATCATTTAGACGTGGCTGCAATGTACCCAAATATTATTTTGACAAATAGGCTTCAGCCACCATCAATTGTTACAGATGAGGTCTGTACTGCATGTGATTTCAATCGCCCAGACAAGACTTGTCTCCGGAAACTTGAATGGGTTTGGCGTGGGGAGATATTCATGGCAAAGAAAAGTGATTATTACCACTTGAAGAAGCAAATTGAGTCTGAATTTTTTGATGGTACTGAGGGTCAGTTGTCGAAATCTTTTCTTGACCTGCCTAAGCTGGAGCAACAATCCAGGCTGAAAGACCGTTTGAAGAAATATTGTCAGAAGGTATATAAACGAGTTTTGGACAAGCCAGTTACTGAACTTCGAGAAGCAGGGATCTGCATGCGTGAAAACCCTTTTTATGTTGACACTGTCCGCAGCTTTCGAGATAGAAGGTATGAATACAAAGGACTTAATAAAGTTTGGAAGGGGAAGTTGTCAGAAGCCAAGGCTGGTGGAAATCCTATGAAGATCCAAGAAGCACAAGACATGGTAGTGCTTTATGATTCCTTACAACTTGCCCATAAGTGTATTCTGAACTCATTCTATGGATATGTTATGCGCAAAGGTGCAAGGTGGTACTCGATGGAAATGGCTGGTGTAGTTACATATACTGGCGCTAAAATTATTCAGAATGCTCGCTTACTTGTTGAAAAAATTGGGAAACCACTTGAACTAGACACAGATGGTATCTGGTGTGCTCTTCCTGGGTCTTTTCCTGAAAACTTTACTTTCAAAACTAAAGACTCAAAGAAGAAGCTGACAATCTCTTATCCGTGTGTTATGCTTAATGTTGATGTGGCAAGAAACAATACAAATGATCAATACCAGACACTTATAGATCCCGTCAATAAAACATATGCAACTCATAGTGAATGTTCAATTGAATTTGAAGTGGATGGACCATACAAGGCAATGATTCTACCTGCTTCTAAGGAAGAAGGAATTTTAATTAAGAAAAGATATGCTGTTTTTAACGATGATGGAACCCTTGCTGAACTTAAAGGTTTTGAGATAAAGCGTAGAGGTGAGCTGAAACTCATCAAAGTTTTTCAGGCTGAGCTTTTTGATAAGTTCCTCAATGGGTCCAGCTTGGAGGAATGTTACTCAGCTGTTGCTGCTGTTGCAAATCGCTGGCTTGATCTTCTTGATAATCAAGGAAAGGATATTGCGGATAGTGAGTTACTAGATTACATATCAGAATCTAGCACAATGAGCAAGTCTTTGGCAGATTATGGTGAGCAAAAGTCATGTGCAGTGACCACGGCAAGGCGTCTTGCTGATTTTCTTGGTGATGCTATGGTTAAAGATAAAGGACTGCGTTGCCAGTATATAGTGGCATGTGAACCAAGAGGTACACCTGTTAGTGAGCGTGCTATTCCTGTTGCAATATTTGAAACTGATGCTGAAATAATGAAGTTCTATCTACGCAAGTGGTGCAAAACCTTTTCAGAGGTCGGCATACGTTCCATTGTTGACTGGTCATATTACAAGCAACGCCTTAGTTCAGCGATTCAGAAAATTATCACTATTCCTGCTGCGATGCAAAAGGTTGCAAATCCCGTCCCTAGAGTAGCTCATCCTGATTGGCTGCATAAAAAGGTTCGTGAGAAGGAGGATAAATTTCGTCAAAGAAAGTTAGTTGATATCTTTAGCTCATCAGGCAGAGATGATATAATGAAAAAGGCAAGTGATGCTGTTACTGCCAATCATGTTGTTATTGGAGATTTAGAAGACTTCCAAAATAAAAGCCGAAAGTCTGAAAAAGCACCTACACCAATTGTTCGTTGTTATGAAGTCAATGATGATCAACATCCTGTCAAGGAAGTCGTCCAAGCCAATTCTCTGCAACACCAAATCGAATGTAGAGGAAGTGCACAACAGCTTTCATCGCCATTGTTGCCAAATGTTCAATCCACTGAAAACATTGACAGAAATGTTGATTATCAAGGATGGCTTGAATTGAAGAAGAGAAAATGGAAGGATAATCTGGAAAGGAGGAAGAGGCAAAGGTTGGCTAATCAAAGAACTTCACAGCATGCCAGTAGCACTTCTGAGCTGCTGCGTGGTGTGGAAAACCATAAAGATGCCTGGGGAAGAACCGGTGTTGGTTCATATTTTAGGAGGCATGACGCATCTCTAACAAATACCCATTGGCAGATAATACAGCTAGTCCCAGGTTCACACAATGGCCAATTTTTTGCTTGGGTCGTTGTTGAAGGAATTATGCTTAAGGTTCCTATAACTGTTCCGAGAGTGTTCTATTTGAACTCTAAAGCAACAATATCAGAAAGTTTTCCTGGAAGGCGGGTAAACAAGACTCTTCCTCATTCGAGGCAGAGCTATAACCTAATTGAGGTTATAATTGATGAAGATCATTTTAGGAGGGAGAGCAAGAAACTCGCAGCTCTCCTCGCTGATCCTGAAATTGAGGGGATATATGAAAGAAAGGTGCCACTGGAGTTTAATGCTATTCTCCAGCTTGGTTGTGTTTGTAAAGTAGATAAGACAGCTAAGAAACGAAATGCTCAGGATGGTTGGAGTTTGAGCGAATTACACATGAAGACTACAACAGAATGTGCTTACCTGGAGCAGGCAATCTCTTTCTTTTACTTGTATCATAGTATCTGTGAAGGCCGTGCCATGTATGCTGGCTATTTTTCTTCATCACAAGCAGTACACGTGGTGGTAGTTAATCCTCACCACGAAAATGAAATTTTATCTCCATATATCCTTGAGAAATATTTTCATGAAGCTTGCCAGGCATTGTCTATTGAACCACCAGCTCGTAATAGTATAGCTTTCAAGGTGAACTATGTTGAAGATGTCAAGGATGCTGAAAAGATTTTACAAAGAGCTATAAGTGAACAAAGACATGAACATCAAGGACCTACTGTTGCTGTCATTGAATGCCCAAAGACACAATCAATGAAGTCAGGTATACGAGCTCTCGAAGATTTCCCTTGTGTGAGCATACCTTCCAACGCTCGTGATAATGATTATCAGCTGCTTGTGTGGCAACAAACAGCTGCAAAAATTGGAATGCAGCGGTGTGCTGCATCATCTCAGTGGTTGAATGAGAGGATCTCTCTCTCAAGATATGCACATGTACCATTGGGCAATTTTGAACTTGATTGGCTATTATTTACAGCAGATGTCTTCTTTTCTAGAGCTCTACGTGATCAGCAACAGGTACTCTGGATATCTGATGATGGTGTTCCTGACCTAGGAGGCACTGGTGAAGAAGACATATGTTATGCTGATGAGGTCCATCAGCCTGTTATTACATACCCGGGAGCATATAGAAAAGTTTCTGTGGAGCTAAAGATTCATAACCTGGCTGTGGATGCTCTTTTAAAAAGCAACCAAATCAATGAAATGGAAGGAGGAGCTTTATTAGGATTTGACCAAGATGTGAATTCCGGAAATGAACAGTGTGGTTTTGATGAAGCTACCTCATCTGCAGCTGCATTTCGAGTCTTGAAACAACTGATACAGAGGTGTCTTGCTGATGCAGTTTCATCAGGAAATGTGTTTGCTGATGCAATACTGCAGCATCTATATCGGTGGCTTTGCAGTCCTCAGTCAAAGCTTCATGATCCAGCTCTTCATCGCATACTTCACAAGGTCATGCAAAAGGTGTTTGCTTTGCTGTTGGCTGAATTTCGCAAATTGGGTGCAACAATTATATTTGCAGACTTCTCTAAGGTTATCATTGACACAGGCAAATATGATATCTCAGCAGCCAAAGCTTATTCTGATAGCTTGCTGCAAGCTCTACAGAATAGAGAACTATTTGAATGGATCGAGCTTGAGCCGATTCACTTCTGGCATTCCTTGCTTTTTATGGATCAGTACAACTACGGGGGAATCCTGGCGGGATCTGATGAAAATTCACAAGATAAGTCGGAAGTGGATATTGTTTCAAGCTGGAATATTGCCCAGTATTTACCTGAGAAAATTCAGGATCATTTTGTTCTAATTGTCTCCGAGTTTTTGCATACTCCCTGGAAATATGCACAAGACCAGGCTGCAAATAGAACATCCTCGCTGGATGGTAGTTTATGCACTCCATCCATCACTATCACAGCTGCTGAGAGTTTTGAAGCGCATATTGTGAAATATCTCAAAGAGCAGATTAGCTCCTACTTCACGGAAAAACTTCTAGGAATTGTTCGTGATATTGTTCTTCACATGAAAGGGTTGAGCAGATCCGAAAATGATCAACAGAGTGCACATATGATTTTTCAGCTTGCTAGTAATGTCAACAGAGGGGATGCTGCACTGGAGTTTATTAAGCATGTCTGTGCTGTTCTGGCCCTTGACCATAATGTTCAGCATGATGTTCTGGTGCTAAGAAAGAATCTGCTGAAATATGCACGCATTAGGGAGTTTGCTCCAGAAGCTGAGTTTCATGATCCATGCCCTTCTTTCATCTTACCAAATGTGATCTGCAGCTACTGCAACGATTGCAGAGACCTGGATTTATGCCGTGACTCAGCCTTACTGGCTGACGAATGGCGCTGTGCCGTGCCCCAGTGTGGGCAGCCTTATGATCGCGAGGTGATGGAGAATGCTCTTCTTCAAATTGTACGTCAAAGAGAACGTCTGTACCATCTGCAGGATCTGTTGTGCTGTAGGTGCAGACAGGTGAAAGCTGCACATTTAGCGGAACAATGTGCCTGTGCTGGCTCATTTAGATGTAAAGAAGATGTCTCTGAATTTCGAAGCAAAATGCAGATATTCCTGAACATAGCCATCCGGAAAAAGTTTCTACTCCTCCAGGAGTGTACCTCATGGATTTTAGAAGTCAACTTGTAG
Protein Sequence
- >Tc09v2_g024020
MNGGDNRRRDRRDLRSSKKQKKLIRSAEEELESKLGFDLFSEGEKRLGWLLTIASSSCEDADTGKVYSCVDLYFVSQDGSCFKSKFKFRPYFYVAAKDRAEMDVEAYLRRRYESQIAEIEIVEKEDLDLKNHLSGLHKRYLKIAFDTVQQLMDVKKDLVHVVERNQAKFEAAEAYESILIGKREQRPLDFLDYIVDLREFDVPYHVRFAIDNDVRCGQWYDVSVSSTGVMLEKRTDLLQRAEVRVCAFDIETTKLPLKFPDAEYDLIMMISYMVDGQGYLIINRECVGQDIEDLEYTPKPEFQGYFKVTNVKNEVELLRQWFAHMQKVKPGIFVTYNGDYFDWPFIESRAAYHGFKMSDEVGFRCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQTDPEKFYKNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLISNLDRDLQYAIRVEGKMDLESVSNYDEVKNEIIEKLVKLRDEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPDKTCLRKLEWVWRGEIFMAKKSDYYHLKKQIESEFFDGTEGQLSKSFLDLPKLEQQSRLKDRLKKYCQKVYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKAGGNPMKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKTKDSKKKLTISYPCVMLNVDVARNNTNDQYQTLIDPVNKTYATHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLNGSSLEECYSAVAAVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLGDAMVKDKGLRCQYIVACEPRGTPVSERAIPVAIFETDAEIMKFYLRKWCKTFSEVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVAHPDWLHKKVREKEDKFRQRKLVDIFSSSGRDDIMKKASDAVTANHVVIGDLEDFQNKSRKSEKAPTPIVRCYEVNDDQHPVKEVVQANSLQHQIECRGSAQQLSSPLLPNVQSTENIDRNVDYQGWLELKKRKWKDNLERRKRQRLANQRTSQHASSTSELLRGVENHKDAWGRTGVGSYFRRHDASLTNTHWQIIQLVPGSHNGQFFAWVVVEGIMLKVPITVPRVFYLNSKATISESFPGRRVNKTLPHSRQSYNLIEVIIDEDHFRRESKKLAALLADPEIEGIYERKVPLEFNAILQLGCVCKVDKTAKKRNAQDGWSLSELHMKTTTECAYLEQAISFFYLYHSICEGRAMYAGYFSSSQAVHVVVVNPHHENEILSPYILEKYFHEACQALSIEPPARNSIAFKVNYVEDVKDAEKILQRAISEQRHEHQGPTVAVIECPKTQSMKSGIRALEDFPCVSIPSNARDNDYQLLVWQQTAAKIGMQRCAASSQWLNERISLSRYAHVPLGNFELDWLLFTADVFFSRALRDQQQVLWISDDGVPDLGGTGEEDICYADEVHQPVITYPGAYRKVSVELKIHNLAVDALLKSNQINEMEGGALLGFDQDVNSGNEQCGFDEATSSAAAFRVLKQLIQRCLADAVSSGNVFADAILQHLYRWLCSPQSKLHDPALHRILHKVMQKVFALLLAEFRKLGATIIFADFSKVIIDTGKYDISAAKAYSDSLLQALQNRELFEWIELEPIHFWHSLLFMDQYNYGGILAGSDENSQDKSEVDIVSSWNIAQYLPEKIQDHFVLIVSEFLHTPWKYAQDQAANRTSSLDGSLCTPSITITAAESFEAHIVKYLKEQISSYFTEKLLGIVRDIVLHMKGLSRSENDQQSAHMIFQLASNVNRGDAALEFIKHVCAVLALDHNVQHDVLVLRKNLLKYARIREFAPEAEFHDPCPSFILPNVICSYCNDCRDLDLCRDSALLADEWRCAVPQCGQPYDREVMENALLQIVRQRERLYHLQDLLCCRCRQVKAAHLAEQCACAGSFRCKEDVSEFRSKMQIFLNIAIRKKFLLLQECTSWILEVNL