Information report for Tc06v2_g003100
Gene Details
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Functional Annotation
- Mutant has early-flowering phenotype, encodes a putative nucleoporin. Required for the activation of downstream defense pathways by the snc1 mutation. Involved in basal resistance against bacterial pathogens.
Homologous
- Actinidia chinensis: CEY00_Acc29548
- Citrullus lanatus: Cla97C02G048640
- Cucumis melo: MELO3C014532
- Cucumis sativus: CsGy6G022870
- Glycine max: Glyma.14G005800
- Gossypium hirsutum: Gohir.A10G069101, Gohir.D10G082300
- Juglans regia: Jr07_32080
- Manihot esculenta: MANES_04G104700
- Populus trichocarpa: POPTR_003G180100v3
- Prunus avium: Pav_sc0000663.1_g240.1.mk
- Prunus persica: PRUPE_2G099100
- Rosa chinensis: RchiOBHm_Chr1g0336931
Sequences
CDS Sequence
- >Tc06v2_g003100
ATGGCGTCCGCTTCTTTTCTCCCGGCTTCAGGGACTTTGAGTGAAATTGACAATACAACAAGTGATAAATCTACAAGTGGGACGCTCTTTGATGTGGAAAATTGTGATTTACAGATTACATCACTATACAAGAAGAGAAGCCTTTCTACAACTACTGATTTTTTGTCACATTATGTTTCAAGAAAAATTAAGGAATCTTTACCTAGTTTGCATTCCTCTGATTATTATATGGAGCCTTCCTTGAAAGATATGGTAACATTGGAACTCATGGATCCTGGTTTCTGCAGCCGCATTCCAGATTTTGTGGTTGGAAGAATTGGCTATGGTTGTGTAAAATTTTTTGGAAATACTGATGTTAGAGGGTTGAATCTAGATCAAATTGTGAAGTTCCATAGGCATGAGGTGATTGTATACGAAGATGAAAGTAATAAGCCTATGGTTGGTCAAGGCCTTAACAAGACTGCTGAGGTAACTTTGAGGCTTCAACTTAAACATTTAATCTTGGAAAAACAGGAGGTAGATGGTATTGTTAAGAAATTAGGAGAGAGCATGACGAGGCAAGGGGCACAATTCATTGCATTTGACCCAGCAAATGGTGAATGGAAATTCTTGGTTGACCATTTCAGCAGATTTGGACTGAGTGAAGATGAGGAGGAAGATATTATAATGGATGATGCAACAGGGGTTGTCCAAGATCCTGGGGAAATGAATGGTGGTGAGAATTCTGGGATTGATGAAGATATGCAAATAGATACTAATGGACTGGTGCTTTCTCATTCTCTGCCTGCACATCTTGGGCTTGACCCATTGAAGATGAAAGAAATGAGAATGTTGATGTTTCCTGTTGAGGAAGAAGAGGAGATTGAGGATTTTAGAGGGGCAGCTTCTCATCAGAAACCAGCCTTTGGCAAAGAATACATAAGGTCTCCTCTGCATAACTCTAATCAGAGGATGAGTCATAGGTCTAGCCCACCTGTTGTACGGAAAACCCCAGTTGCTTTGCTTGAGTATAATTCTGGTAATTTTGATTCAAGCTCATCTGGAAATGTTCTGATGGTACAAGAAAATAAGGGCATGCCTTTAAAGACTGTTAAAAAAGAAGGTTTCAAGCTGGACCTCAAGCAAGAGACGCCTGTCACTGGTAGCCATTCTAGAAACATAGTTGATGCAGCATTGTTCATGGGTAGATCATTTCGTGTGGGTTGGGGCCCAAATGGCATTCTTGTCCACTCTGGTGCACCTGTAGGTAGTAATGACTCCCAGAGAGTATTGTCTTCTGTAATCAATATAGAAAAAGTGGCAATTGATAAAGTAGTTAGAGATGAAAATAACAAAGTAAAGAAAGAACTTATTGACTTTGCTTTTGATGCTCCATTGAATCTTCACAAGGCCCTAAATTATGAAGAAAAAGAATTGGAAGTTGGATACTTTAAGTTGAAGCTTCTGAAGGTTGTCTCTAATCGCTTAGAGCTCTCTGAGATTTGTAGGAGCTATATAGACATTATTGAGAGGCAGTTGGAGGTTCCTGGTCTGTCTTTGTCTGCTCGCTTGGTTTTGATGCATCAAGTAATGGTCTGGGAATTGATAAAAGTTCTTTTTTCAGAAAGGGAAAATACTGCTCATCTGAAATCTATGGGTGCTGATAATGAGGAAGACGAGATGCAAGATATCAAGGAAGGTCCTCCAGAAGTTGACCTGGAATCACTGCCTCTTATTCGAAGGGCAGAGTTTAGTTGTTGGCTGCAAGAAAGCGTTTGTCACCGTGTACAAGAAGGAATAAGCTCAGTGAATGATTCAGGTTATTTGGAACACTTATTCTTTCTCTTGACTGGGCGACAATTGGATGCAGCTGTGGAGCTGGCTGCTTCTAAAGGAGATGTTAGACTGGCTTGTTTACTAAGCCAGGCTGGTGGATCAACAGTTAATCGTTCTGATGTTGCACGGCAGCTTGATATTTGGAAAATTAATGGGCTGGACTTCAAGTTCATTGAGAAGGATAGAATTCGGCTTTATGAGTTGCTTGCTGGTAATATCGTTGGTGCTATGCATGGTGTTAAGATTGACTGGAAGAGATTCTTAGGATTGTTGATGTGGTATCACCTACCACCAGATACTACATTGCCCACTGTTTTTCAAACTTATCAGCAACTTCTTGATGATGGAAAAGCTCCATATCCTGTTCCAATTTATGTTGATGAAGGACCTGTCGAAGAGAATGCAAATTGGAGTAGAGTGGAACGATTTGATCTTTCATACCATCTTATGCTTCTGCATGCCAGTGAAGAGAGTCAATTATGCTCCCTGAAGACAATGTTTAGCACATTCTCTTCAACACACGATCCGCTTGACTACCATATGATCTGGCATCAGCGGGCTATCTTGGAGGCTGTTGGTGCTTTCTGTTCTAATGATCTTCAAGCTCTTGACATGGGACTTATATCCCAGTTGCTATGCCAGGGGCAGTGCCATTGGGCTATCTATGTAGCCCTTCACATGCCCTACCGTGATGATTATCCTTATCTTCAAGCCATTCTTATCCGGGAAATTTTGTTCCAATATTGTGAATCTTGGAGTTCACAAGGATCACAACGCCAATTTATCGAGGACTTGGGTGTTCCATTGCAATGGTTGCATGAAGCTATGGCAGTTTATTTTAATTATCATGGGGATTTGCCAAAGGCTCTCGAGCACTTTCTGGAATGTGCAAGTTGGCAAAAAGCTCATTCTATTTTCATGACTTCAGTATCTCATGCGTTATTCTTGTCTGCCAATCACTCTGAGGTGTGGAGGATTGCGACGTCAATGGAGGACCACAAGTCAGAAATTGAAAATTGGGACTTGGGAGCTGGAATTTATATTTCATTCTATGTAGTAAGAAGTTCATTGCAGGAGGACAACAATACTATGGGTGAACTGGATTCTCTTGACAGCAAAAATGCAGCTTGTAGGGACTTTCTTGGTCGTTTGCATGAGTCTTTGGCAGTTTGGGGTGGCAGGTTACCAGTTGATGCAAGAGTGGCTTATTCAAAGATGGCGGAGGAGATATGTGATTTGTTGCTTTCTGAGATTAGTGAGGGTCCTACGCGTGATGACCAGTTAAGCTGCTTTGATACCGTCTTCAGCGCCCCCATTCCCGAAGACCTTCGGTCGAATCATTTGCAGGATGCGGTTACACTATTTACTTGTCATCTTTCAGAAGTGGCGAGTTAG
Protein Sequence
- >Tc06v2_g003100
MASASFLPASGTLSEIDNTTSDKSTSGTLFDVENCDLQITSLYKKRSLSTTTDFLSHYVSRKIKESLPSLHSSDYYMEPSLKDMVTLELMDPGFCSRIPDFVVGRIGYGCVKFFGNTDVRGLNLDQIVKFHRHEVIVYEDESNKPMVGQGLNKTAEVTLRLQLKHLILEKQEVDGIVKKLGESMTRQGAQFIAFDPANGEWKFLVDHFSRFGLSEDEEEDIIMDDATGVVQDPGEMNGGENSGIDEDMQIDTNGLVLSHSLPAHLGLDPLKMKEMRMLMFPVEEEEEIEDFRGAASHQKPAFGKEYIRSPLHNSNQRMSHRSSPPVVRKTPVALLEYNSGNFDSSSSGNVLMVQENKGMPLKTVKKEGFKLDLKQETPVTGSHSRNIVDAALFMGRSFRVGWGPNGILVHSGAPVGSNDSQRVLSSVINIEKVAIDKVVRDENNKVKKELIDFAFDAPLNLHKALNYEEKELEVGYFKLKLLKVVSNRLELSEICRSYIDIIERQLEVPGLSLSARLVLMHQVMVWELIKVLFSERENTAHLKSMGADNEEDEMQDIKEGPPEVDLESLPLIRRAEFSCWLQESVCHRVQEGISSVNDSGYLEHLFFLLTGRQLDAAVELAASKGDVRLACLLSQAGGSTVNRSDVARQLDIWKINGLDFKFIEKDRIRLYELLAGNIVGAMHGVKIDWKRFLGLLMWYHLPPDTTLPTVFQTYQQLLDDGKAPYPVPIYVDEGPVEENANWSRVERFDLSYHLMLLHASEESQLCSLKTMFSTFSSTHDPLDYHMIWHQRAILEAVGAFCSNDLQALDMGLISQLLCQGQCHWAIYVALHMPYRDDYPYLQAILIREILFQYCESWSSQGSQRQFIEDLGVPLQWLHEAMAVYFNYHGDLPKALEHFLECASWQKAHSIFMTSVSHALFLSANHSEVWRIATSMEDHKSEIENWDLGAGIYISFYVVRSSLQEDNNTMGELDSLDSKNAACRDFLGRLHESLAVWGGRLPVDARVAYSKMAEEICDLLLSEISEGPTRDDQLSCFDTVFSAPIPEDLRSNHLQDAVTLFTCHLSEVAS