Information report for Tc04v2_g024790
Gene Details
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Functional Annotation
- Red/far-red photoreceptor involved in the regulation of de-etiolation. Exists in two inter-convertible forms: Pr and Pfr (active). Involved in the light-promotion of seed germination and in the shade avoidance response. Promotes seedling etiolation in both the presence and absence of phytochrome A. Overexpression results in etiolation under far-red light. Accumulates in the nucleus after exposure to far red light. The phosphorylation state of the Ser-86 residue of the phytochrome B molecule alters dark reversion of the molecule.;Encodes photoreceptor phytochrome B
Homologous
- Actinidia chinensis: CEY00_Acc22895
- Citrullus lanatus: Cla97C05G088180
- Cucumis melo: MELO3C006717
- Cucumis sativus: SH3.1
- Gossypium hirsutum: Gohir.A10G172500, Gohir.D10G179000
- Juglans regia: Jr07_11560
- Manihot esculenta: MANES_03G205100
- Nicotiana attenuata: A4A49_26492
- Populus trichocarpa: POPTR_008G105200v3
- Prunus persica: PRUPE_1G117000
- Rosa chinensis: RchiOBHm_Chr4g0425301
- Sesamum indicum: SIN_1016170
- Solanum lycopersicum: Solyc01g059870.3
- Solanum tuberosum: PGSC0003DMG400024017
- Vitis vinifera: VIT_05s0077g00940
Sequences
CDS Sequence
- >Tc04v2_g024790
ATGGCTTCTGGGGGCAGAGCAGTTCACTCCCAGCATCAGCAGCAGCAGCAGCAAGCTCAGTCTTCGGGCACCAGCAACATGAGGGCGCCCCGCGGGCATAACCACCAGGCTGACTCCGTCAGCAAAGCCATTGCTCAGTACACGGTTGACGCTCGACTCCATGCTGTTTTCGAACAATCTGGGGAAACCGGTAAGTCCTTTGATTACTCCCAATCCGTTAGAACCACCACCCAATCCGTTCCAGAACAACAAATCACAGCTTATCTGTCTAAAATCCAAAGAGGCGGGCACATCCAGCCATTTGGCTGCATGATGGCAGTTGACGAACCCAGTTTCCGCGTCATCGCGTACAGCGAAAACGCCCGTGAGATGCTTGGAATAACCCCTCAATCTGTTCCCAATTTGGAGAAAACCGAAGTGCTCACAATTGGGACTGATGTTCGCACCCTTTTCACACCTTCCAGCGCAACTCTGTTAGAAAAAGCCTTCGGGGCGCGCGAAATCACGTTGCTGAATCCGGTTTGGATTCACTCTAAGAACTCAGGGAAACCCTTTTACGCTATTTTGCATAGGATTGATGTTGGAATTGTGATTGATTTGGAACCTGCTAGAACAGAGGACCCTGCCCTGTCTATTGCAGGGGCTGTCCAGTCACAAAAATTAGCTGTCCGTGCAATTTCTCAGTTGCAATCCCTCCCCGGTGGCGATATTAAACTCTTGTGTGATACTGTTGTGGAGAGTGTTCAAGAGCTTACCGGATATGATAGGGTAATGGTTTATAAGTTTCATGAGGATGAGCATGGGGAGGTTGTGGCTGAGAGTAAAAGGCCTGACTTTGATCCTTACATTGGCTTACATTATCCTGCATCTGATATTCCTCAGGCGTCGAGGTTTTTGTTTAAGCAGAACAGAGTTAGGATGATAGTGGACTGCCATGCCACGCCTGTGCGTGTGGTTCAGGATGATGGGTTGATGCAGCCTCTGTGCTTGGTTGGTTCCACTCTTCGTGCTCCTCACGGTTGCCATGCTCAGTATATGGCTAATATGGGGTCAATTGCTTCTTTGGCAATGGCAGTTATTATCAATGGAAATGATGAGGAAGCTATTGGGGGAAGAAATTCAATGAGGCTTTGGGGTTTGGTTGTTTGTCATCATACTTCTGCTCGTTGCATTCCATTTCCCCTTCGATATGCTTGTGAGTTCCTAATGCAAGCGTTTGGACTTCAATTGAATATGGAATTGCAATTGGCATCTCAGTTGTCGGAGAAACGTGTTTTAAGGACTCAAACTCTTTTGTGTGATATGCTTCTTCGTGACTCTCCAACTGGGATTGTTACTCAAAGTCCCAGCATTATGGATCTTGTGAAATGTGATGGGGCTGCTCTTTATTACCAAGGTAAATACTACCCATTAGGTGTGACGCCAACTGAGGCCCAGATAAAAAATATTGTCGAGTGGTTGTTGGAATTCCACGGAGACTCAACAGGTTTAAGCACAGACAGTTTGGCTGATGCTGGCCACCCTGGGGCAGCCTCACTTGGGGATGCAGTTTGTGGGATGGCTGTTGCCTATATCACTAAAAGGGATTTTCTATTTTGGTTCCGGTCCCACACAGCAAAAGAGATTAAGTGGGGTGGTGCAAAGCATCACCCAGAGGACAAGGATGATGGACAAAGAATGCACCCACGGTCTTCATTCAAGGCATTTCTGGAAGTGGTCAAAAGTCGGAGTTTGCCATGGGAGAATGCAGAAATGGATGCAATTCACTCACTGCAGCTTATTCTGCGTGACTCATTCAGGGATACTGAAGCAAGCAATTCTAAAGCTGTTGTACATGCTCAGCTTGGGGAACTAGAGCTACAAGGAGTGGATGAACTCAGCTCAGTTGCAAGAGAAATGGTGAGGTTAATAGAGACTGCAACTGCTCCCATATTTGCTGTAGATGTTGAAGGTCTCATTAATGGGTGGAATGCAAAGGTTGCAGAACTGACAGGGCTCTCAGTTGAGGAAGCCATGGGGAAGTCTTTGGTTCATGATCTTGTTTACAAGGAATATCAAGAAACTGTCGACAAGCTTCTTAGTCGTGCTTTGCAAGGTGAAGAAGATAAAAATGTAGAGATAAAATTGAGGACTTTTGGCTCAGAAGGTCATAAAAAGGCTATATATGTGGTGGTCAATGCTTGCTCCAGTAAGGATTATAAAAATAATATAGTTGGAGTTTGCTTTGTTGGTCAGGATGTTACTGGTCAAAAGGTGGTGATGGACAAATTTATCCACATACAAGGTGATTATAAGGCCATTGTTCATAGTCCCAATCCTTTGATCCCACCCATTTTTGCTTCAGATGAAAACACATGTTGCTTGGAGTGGAACACAGCCATGGAAAAGCTCACTGGGTGGACTCGAGAGGAAATCATTGGAAAAATGTTGGTTGGTGAGGTTTTCGGCAGTTACTGTCGTCTCAAGGGTCCAGATGCTTTGACGAAATTCATGATTGTTTTACACAATGCCATTGGAGGGCAGGAGGCAGATAAGTTCCCTTTTTCCTTCTTTGACCGCAACGGGAAATTTGTGCAGGCACTCTTGACAGCAAATGAAAGGGTCAATATGGAAGGCCAGGTTGTAGGAGCCTTTTGCTTCCTGCAGATTGCAAGTCCAGAGTTGCAGCAAGCACTGAAAGTCCAGAGGCAACAGGAAAAGAAGTGCTTTGCTAGGATGAAAGAGTTGACCTACATTTGCCAGGAGATTAAGAGTCCTTTGAATGGGATCCGCTTTACTAACTCACTTTTGGAAGCTACAGAACTGACTGAAGATCAAAAGCAGTTTCTTGAGACTAGTGCTGCTTGCGAGAAGCAAATGTTGAAGATTATAAGAGATGTTGATGTGGAGAGCATTGAGGACGGTTCTATGGAGCTTGAAAGGGCTGACTTTTATCTTGGGAGTGTCATAAATGCTGTTGTTAGCCAAGTAATGCTACTGCTGAGGGAAAGAAATCTGCAGTTAATTCGGGATATTCCCGAGGAGATCAAAACTCTGGCTGTTTATGGTGATCAGGCGAGAATCCAACAGGTATTGGCCGATTTTTTGTTGAATATGGTGCGTCATGCACCATCTGCCGAAGGTTGGGTAGAGATTCATGTTCGTCCCAATTTGAAGCGAATTTCTGACGGACTCACTATTGTGCGTACTGAATTCAGGATGGTATGCCCTGGTGAAGGTCTTCCTCCTGAATTGGTTCAAGACATGTTCCATAGCAGTCGATGGATGACACAAGAAGGCTTAGGGTTGAGCATGTGCCGAAAAATCTTAAAGCTTATGAATGGTGAGGTCCAATATATCAGAGAATCAGAAAGATGTTATTTCTTAATCATCCTCGAACTTCCTGTACCTCGGAGAGGCTCAAAGAGTGTTGACTAG
Protein Sequence
- >Tc04v2_g024790
MASGGRAVHSQHQQQQQQAQSSGTSNMRAPRGHNHQADSVSKAIAQYTVDARLHAVFEQSGETGKSFDYSQSVRTTTQSVPEQQITAYLSKIQRGGHIQPFGCMMAVDEPSFRVIAYSENAREMLGITPQSVPNLEKTEVLTIGTDVRTLFTPSSATLLEKAFGAREITLLNPVWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVQELTGYDRVMVYKFHEDEHGEVVAESKRPDFDPYIGLHYPASDIPQASRFLFKQNRVRMIVDCHATPVRVVQDDGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAQIKNIVEWLLEFHGDSTGLSTDSLADAGHPGAASLGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDTEASNSKAVVHAQLGELELQGVDELSSVAREMVRLIETATAPIFAVDVEGLINGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYQETVDKLLSRALQGEEDKNVEIKLRTFGSEGHKKAIYVVVNACSSKDYKNNIVGVCFVGQDVTGQKVVMDKFIHIQGDYKAIVHSPNPLIPPIFASDENTCCLEWNTAMEKLTGWTREEIIGKMLVGEVFGSYCRLKGPDALTKFMIVLHNAIGGQEADKFPFSFFDRNGKFVQALLTANERVNMEGQVVGAFCFLQIASPELQQALKVQRQQEKKCFARMKELTYICQEIKSPLNGIRFTNSLLEATELTEDQKQFLETSAACEKQMLKIIRDVDVESIEDGSMELERADFYLGSVINAVVSQVMLLLRERNLQLIRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRHAPSAEGWVEIHVRPNLKRISDGLTIVRTEFRMVCPGEGLPPELVQDMFHSSRWMTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLIILELPVPRRGSKSVD