Information report for Tc01v2_g029960
Gene Details
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Functional Annotation
- Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.
Homologous
- Citrullus lanatus: Cla97C05G081810
- Gossypium hirsutum: Gohir.D12G111700, Gohir.D11G094400, Gohir.A11G090000, Gohir.A12G108600, Gohir.D07G147500, Gohir.A07G141800
- Juglans regia: Jr12_04090, Jr12_04100
- Manihot esculenta: MANES_01G255300, MANES_05G032800
- Populus trichocarpa: POPTR_002G160900v3, POPTR_014G086500v3
- Prunus avium: Pav_sc0000254.1_g1560.1.mk
- Prunus persica: PRUPE_2G172900
- Rosa chinensis: RchiOBHm_Chr1g0356661
- Vitis vinifera: VIT_15s0046g02290
Sequences
CDS Sequence
- >Tc01v2_g029960
ATGCGATCTGGTGGTAGAGGCGGAGGTGGGCCCAGCCGGAACCCGGGGGTGGGCCCGGTGGGGCGGGCAGCATCCACATCGTCCGCAGCTTCGCCTTCTTCCTCTTCATCGGCCGTTTCGACCCCTCACTTGGGATTTCATTCGGTGCCGCAGCAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCATATAACGTCTAGACAGTCATTACAACAACAATTACTGAGAAAACCTGAAGGAAATGAAGCCATCCTGGCATATCAAGCCAGTGGTCTTCAAGGTATGATGGGGGGAAGCAATTTTCCTTCATCTCCAGGCTCCATGCAACTGCCTCAACAGTCCAGGAAGTTTTTTGATCTCGCTCAACAACATCCTTCTGCCCAGGAGGGCCAGAATAGGAGTCAAGGTGTTGACCAACAAATGCTGACTCCTGTTCAGCAAGCTTATTACCAGTATGCTTACCAGGCTGCACAGCAACAGAAGTCAATGTTGGTGCATCAGCAAGCTAAGATGGCAATGTTGGGCTCCACATCTGGTAAGGATCAGGACATGCGAATTGGAAATTTAAAATTGCAAGAACTTATTTCCATGCAGGCAGCCAATCAGGCTCAGGCATCATCCTCTAAGAACGCATCTGAGCAGCTCAGTCGTGTTGAAAAGCAGATGGATCAAGGACCACAGTCAGTTTCTGACCAAAGAAATGAGCCCAAGCCACCTGCCCAGGCAACAGTTATTGGACAATTAATGCCTGGAAATGTCTTAAGGGCTATGCAGGCACAACAAGCTCAGCAAACTGTTCAAAACATGGGAAGCAATCAACTCGCTATGGCTGCACAGTTGCAGGCATGGGCACTTGAGCGAAATATTGATCTGTCACAACCTGCAAATGCCAACTTGATGGCACAGCTTATTCCCCTCATGCAGTCTAGGATGGCTGCCCAGCAAAAAACAAATGAAAGCAATATGGGTTCTCAGTCATCACCTGTGCCTGTGTCCAGGCAGCAGGTCACTTCTCCGTCAGTTCCAAGCGAGAGTTCTCCTCGTGGTAATTCATCCAGTGATATATCTGGTCAGTCTGGCACTGCAAAAACCAGGCCAACAGTTCCACCTAGCCCTTTTGGCTCAACTTCCAGCACTGGGGTGGTTAACAATGCTAACAACATTGCAATGCAGCAGTTAGCCATTCATGGTCGAGATAACCAAGTGCCTCCTAGGCAGCCAGTTGTGCAGGGAAACGGGATGCCTCCTATGCATCCTCCACAATCATCTGTAAATGTTAGCCAGGGTGTTGATCCATCTTTGCCTGCAAAAAATTTATTAGGCAGCACAGAAACAGTGCAAATGCAGTATCTTAAACAGTTAAATCGATCTTCTCCACAGCCTGCAGCTCCTAATGATGGAGGATCAGTTAACAACTTATCATCACAAGGGGGAGCAGCTACCCAGATACCGCAGCAACGTTTTGGCTTCACTAAACAACAGCTTCATGTTCTTAAAGCACAAATACTTGCATTTAGGCGCCTGAAGAAAGGTGAAGGTACACTTCCACAAGAGCTTCTTCGAGCCATTGTTCCCCCACTACTTGAGCAGCAGCAGCAGCAACAACAACAACAACAACAACAACAACAGCAATTACCTCCTTTAGGTGGAAATAATCAGGAAAGAAATGGTGGAAAGATTATAGAAGATCAAGTGAAGCATTTGGAGACGAAGGAGAAGGTTTCGCAGGCGGGGCCATCCACCAATGGACAGAATATACCTAAAGAGGAAGCTTATGCAGGAGATGATAGAGCAACTGCATCAACAGCTCATATGCAAGGTGTGTCAGCCTCGGCCAAGGAATTTTCATCTACATTGCCTGCTGGAAAAGAAGAGCAGCAAAGTTCTGTCTTGTCTGCTAAGTCAGACCAAGAAGTTGAACGTGGTCTTCCAAAAACTCCAGTCAGAAGTGATTTAACTGTGGATAGAGGAAAGGCTGTTGCATCACAAGTTTCTGCATCTGATGGAGCACAAGTTAAGAAGCCTATGCAAGCAAACTCTGCCCCCCAGCCAAAAGATCCTGGCTCTGCCAGAAAGTATCACGGACCACTGTTTGATTTTCCCTTCTTCACTAGGAAACATGACTCCTATGGTTCAGCAGTGCCTAACAGCAATAATAATCTAACTTTGGCATATGATGTCAAAGATCTGCTTTTTGAGGAAGGCATGGAAGTCCTTAGCAAGAAAAGATCAGAAAATTTGAGAAAGATTGGTGGGTTACTAGCAGTAAACTTAGAGAGGAAAAGGATTAGGCCGGATCTTGTTCTTCGACTGCAAATTGAAGAAAAGAAGCTTCGACTTATAGATGTGCAGGCACGTTTGAGGGATGAAGTTGACCAGCAGCAACAAGAGATAATGGCAATGCCTGACAGGCCATACAGAAAATTTGTCCGACTGTGTGAGCGTCAACGTACTGAGCTGGCTAGACAAGTACAGGTCACTCAAAAGGCTCTGAGAGAGAAGCAATTGAAATCCATATTTCAGTGGCGTAAGAAACTCCTGGAGGCTCACTGGGCCATCCGTGATGCCCGAACTGCTCGCAATAGGGGAGTTGCCAAGTACCATGAGAGAATGCTACGGGAATTTTCAAAGAGGAAGGATGATGATCGGAATAAAAGGATGGAAGCCTTGAAGAATAATGATGTTGAAAGGTACAGGGAAATGTTGCTGGAGCAGCAGACAAGTATCCCTGGTGATGCTGCAGAGAGATATGCAGTTCTTTCATCATTCTTGACGCAGACTGAAGAGTATCTTCATAAATTGGGAAGTAAAATAACAGCTGCCAAAAATCAGCAAGAAGTGGAGGAGGCAGCAAATGCTGCTGCTGTTGCTGCACGGTTGCAGGGTCTATCAGAAGAAGAAGTTAGGGTAGCAGCAGCTTGTGCTGGAGAGGAAGTAATGATAAGAAATCGGTTTATGGAAATGAATGCACCCAGGGATAGTTCATCAGTTAGCAAGTATTATAATCTTGCTCATGCTGTGAACGAGAGGGTCATAAGGCAACCATCAATGCTACGAGCTGGAACTTTACGAGACTATCAGCTTGTTGGTTTGCAGTGGATGCTTTCTTTGTATAACAACAAACTCAATGGTATCTTGGCTGATGAGATGGGTCTTGGGAAGACTGTTCAGGTTATGGCATTGGTTGCTTATTTGATGGAATTCAAAGGAAACTATGGTCCACATCTTATAATTGTTCCAAATGCTGTTCTGGTAAATTGGAAGAGTGAGTTGCATAATTGGCTACCATCTGTGTCATGCATCTATTATGTTGGTGGAAAAGATCAACGTTCAAAATTATTTTCTCAAGAGGTTTTGGCAATGAAATTTAATGTCCTTGTGACAACTTATGAATTCATTATGTACGATCGGTCAAAGCTTTCCAAAATTGATTGGAAGTACATCATAATTGATGAAGCACAGCGAATGAAAGACAGGGAATCTGTTTTAGCTCGTGATCTTGATAGGTACCACTGCCAAAGGCGTTTACTTCTCACCGGGACACCATTACAGAATGACTTGAAAGAACTCTGGTCACTGTTAAATCTTCTCCTTCCTGAAGTGTTTGACAATCGCAAGGCATTTCATGATTGGTTTTCACAGCCATTTCAAAAGGAAGGCCCTACGCATAATGCAGAGGATGATTGGCTTGAGACTGAAAAGAAGGTTATCATCATCCACCGGCTTCATCAAATTCTAGAGCCTTTTATGCTTAGACGTCGTGTTGAAGATGTGGAAGGTTCACTTCCTCCAAAGGTCTCAATAGTTTTAAGATGCAGAATGTCAGCTATTCAGAGTGCCATTTATGATTGGATAAAATCAACTGGGACTCTTCGAGTTGATCCTGAAGATGAGAAGCGTAGGGTTCAAAAAAATCCAATATACCAGGCTAAGGTGTACAAAACTTTAAATAACCGGTGTATGGAGCTTCGCAAGACATGCAATCATCCTTTGCTAAATTACCCGTATTACAATGACTTCTCGAAAGATTTCCTTGTAAGATCTTGTGGGAAATTGTGGATCTTAGACAGAATCCTCATAAAACTACAGAAAACAGGGCATCGAGTATTGCTCTTTAGTACCATGACAAAGCTCCTGGATATCTTGGAGGAATACTTGCAGTGGAGGAGGCTTGTTTACAGACGTATTGATGGAACAACTAGCTTGGAAGATCGTGAATCAGCGATTGTTGATTTCAATAGCCCTGACTCTGACTGCTTTATATTCTTACTTAGTATTCGTGCAGCTGGGCGTGGTCTAAATCTTCAAACTGCTGATACTGTTGTTATATATGATCCTGATCCAAACCCTAAAAATGAGGAACAGGCAGTTGCTAGAGCTCATCGAATTGGACAAACAAGGGAAGTCAAAGTCATTTACATGGAGGCAGTTGTTGACAAAATCTCTTGTCATCAGAAGGAGGATGAACTAAGGAGTGGAGGTACAGTTGATTTTGAGGATGATTTTGCAGGTAAGGATCGATATATGGGATCTATTGAGGGCCTCATAAGGAATAACATTCAACAGTATAAAATTGACATGGCTGATGAAGTTATTAATGCTGGACGTTTTGACCAGAGAACAACACATGAAGAGAGACGCATGACTTTAGAAACATTATTGCATGATGAAGAGAGGTATCAAGAAACTGTCCATGATGTTCCCTCCTTGCACCAGGTAAATCGCATGATAGCAAGAAGTGAGGAAGAAGTTGAGTTGTTTGATCAAATGGATGAAGAACTGGATTGGACTGAACAGATGACTAGTCATGAACAGGTACCTAAGTGGCTTCGAGCTAGTACAAGAGAAGTGAACGCTGCTATTGCTACTTTATCAAAAAAGCCATCAAAGAACATTTTATTTACTGCTGGTGTGGGTGCTGAATCCAATGAAGTGGAGACTGAGAGAAAAAGGGGGCGACCCAAGGGGAAAAAGCATCCTAATTATAAGGAAATAGATGATGAGAATGGGGAATACTCTGAAGCAAGTTCTGATGAGAGAAATGGTTACTCTGGGAATGAGGAAGAGGGAGAAATTGGAGAATTTGAAGATGATGAATTTAGTGGTGCTGTTGGGGCACCACCTACAAATAAGGATCAGTCAGAAGAAGATGGCCCACTTTGTGATGGTGGTTATGAGTATGCCCAGACTTCAGAAAACATTAGAAATAATCACATACTTGAAGAAGGTGGTTCTTCAGGATCATCACTGGACAGTCGAAGACCAACACAGATAGTGTCTCCTATTTCTCCTCAGAAATTTGGATCTCTCTCTGCATTAGATGCTAGGCCTGGTTCCGTTGCGAGAAGGCTGCCAGATGAACTAGAGGAAGGTGAGATTGCAGTATCTGGAGATTCTCATATGGACCACCGGCAATCTGAAAGTTGGGTTCATGAGCGGGATGAAGGTGAAGAGGAACAAGTTGTCCAACCGAAGATAAAACGAAAGCGTAGTATTCGGGTTCGACCTCGTCATACTGTGGAAAGGGCAGAGGAGAAATCTGTCAATGAAGTGCCTCATCTCCAACGTGGAGATTCATCTTTGTTGCCTTTTCAGCTGGACCAAAAATACCAATCACAACAAAGGACTGACACTGAAACAAAACCAACCCGTGACCGCAATGCTTTCAAGCATGATCCAAATGATTCATCTTCAAAAAGCAGGAGGAACTTACCTTCAAGAAAGATTGCTAATACATCGAAGTTGCATGCATCACCAAAGTCTGGTAGAATGAATTCCATGTCTGCCCCTGCAGAAGATGCTGGCGAACCCTCCAGAGAGAGTTGGGACAGTAAACTGGTTAATACAAGTGGGTATTCGGATTTTGGTGCTAAGATGTCTGATGTCATCCAAAGAAAGTGCAAAAATGTGATTAGCAAGCTTCAGAGGAGAATAGACAAGGAAGGTCAACAAATTGTACCACTTTTAACAGATTTGTGGAAGAGGATTGAAAACTCTGGTTACATGGGTGGAAGTGGAAGTAATCATTTGGATTTACGGAAGATTGATCAGCGTGTTGACAGACTAGAGTATAGTGGAGTTATGGAGCTTGTGTCAGATGTGCAGTTAGTGTTAAAAAGTGCAATGCAGTTTTATGGGTTTTCACATGAGGTCAGATCTGAAGCAAGAAAAGTACATGATCTGTTTTTCGACTTGTTGAAGATTGCATTCCCAGATACAGATTTCCGAGAAGCCAGAAGCGCTGTATCTTTTGCTAACCCAGTATCTACCTCGACTTCCACTCCATCCCCTAGACAGGTAGCTGTTGGGAAGAGACAAAAGCCAATAAACGAGGTGGAACCTGATTCAGGCCTCGCTCAAAAGTCATTGCAACGTGGTTCCACTCATGCTGGTGAAGATGCAAGGGTTAGAGTGCATGTGCCCCAGAAGGAATCTAGGCTTGGGAGTGGAAGTGGCATTACCAGGGAGCAATATCAACAGGATGATTCTCTCCTAACTCATCCAGGGGAGCTGGTTATTTGCAAGAAGAAGAGGAAAGACAGGGAAAAGTCTATGGTGAAGCCTAGGACTGGATCAGCTGGCCCTGTTTCACCCCCAAGCATGGGTCGCAACATCAGGAGTCCAGCAGCAGGATCAATCTCTAAGGATTCAAGACTGACCCAGCAGACCACCCATCAGCAAGGTTGGCCCAACCAGCCTGCTCATCCGGCGAACGGTGGTGGTGGGAGTGTTGGTTGGGCCAATCCTGTGAAGAAGCTGAGAACAGACGCAGGTAAAAGGAGGCCAAGCCATTTATGA
Protein Sequence
- >Tc01v2_g029960
MRSGGRGGGGPSRNPGVGPVGRAASTSSAASPSSSSSAVSTPHLGFHSVPQQQQQQQQQQQQQHITSRQSLQQQLLRKPEGNEAILAYQASGLQGMMGGSNFPSSPGSMQLPQQSRKFFDLAQQHPSAQEGQNRSQGVDQQMLTPVQQAYYQYAYQAAQQQKSMLVHQQAKMAMLGSTSGKDQDMRIGNLKLQELISMQAANQAQASSSKNASEQLSRVEKQMDQGPQSVSDQRNEPKPPAQATVIGQLMPGNVLRAMQAQQAQQTVQNMGSNQLAMAAQLQAWALERNIDLSQPANANLMAQLIPLMQSRMAAQQKTNESNMGSQSSPVPVSRQQVTSPSVPSESSPRGNSSSDISGQSGTAKTRPTVPPSPFGSTSSTGVVNNANNIAMQQLAIHGRDNQVPPRQPVVQGNGMPPMHPPQSSVNVSQGVDPSLPAKNLLGSTETVQMQYLKQLNRSSPQPAAPNDGGSVNNLSSQGGAATQIPQQRFGFTKQQLHVLKAQILAFRRLKKGEGTLPQELLRAIVPPLLEQQQQQQQQQQQQQQQLPPLGGNNQERNGGKIIEDQVKHLETKEKVSQAGPSTNGQNIPKEEAYAGDDRATASTAHMQGVSASAKEFSSTLPAGKEEQQSSVLSAKSDQEVERGLPKTPVRSDLTVDRGKAVASQVSASDGAQVKKPMQANSAPQPKDPGSARKYHGPLFDFPFFTRKHDSYGSAVPNSNNNLTLAYDVKDLLFEEGMEVLSKKRSENLRKIGGLLAVNLERKRIRPDLVLRLQIEEKKLRLIDVQARLRDEVDQQQQEIMAMPDRPYRKFVRLCERQRTELARQVQVTQKALREKQLKSIFQWRKKLLEAHWAIRDARTARNRGVAKYHERMLREFSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEEYLHKLGSKITAAKNQQEVEEAANAAAVAARLQGLSEEEVRVAAACAGEEVMIRNRFMEMNAPRDSSSVSKYYNLAHAVNERVIRQPSMLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALVAYLMEFKGNYGPHLIIVPNAVLVNWKSELHNWLPSVSCIYYVGGKDQRSKLFSQEVLAMKFNVLVTTYEFIMYDRSKLSKIDWKYIIIDEAQRMKDRESVLARDLDRYHCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKSTGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYYNDFSKDFLVRSCGKLWILDRILIKLQKTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNSPDSDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAVVDKISCHQKEDELRSGGTVDFEDDFAGKDRYMGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLHQVNRMIARSEEEVELFDQMDEELDWTEQMTSHEQVPKWLRASTREVNAAIATLSKKPSKNILFTAGVGAESNEVETERKRGRPKGKKHPNYKEIDDENGEYSEASSDERNGYSGNEEEGEIGEFEDDEFSGAVGAPPTNKDQSEEDGPLCDGGYEYAQTSENIRNNHILEEGGSSGSSLDSRRPTQIVSPISPQKFGSLSALDARPGSVARRLPDELEEGEIAVSGDSHMDHRQSESWVHERDEGEEEQVVQPKIKRKRSIRVRPRHTVERAEEKSVNEVPHLQRGDSSLLPFQLDQKYQSQQRTDTETKPTRDRNAFKHDPNDSSSKSRRNLPSRKIANTSKLHASPKSGRMNSMSAPAEDAGEPSRESWDSKLVNTSGYSDFGAKMSDVIQRKCKNVISKLQRRIDKEGQQIVPLLTDLWKRIENSGYMGGSGSNHLDLRKIDQRVDRLEYSGVMELVSDVQLVLKSAMQFYGFSHEVRSEARKVHDLFFDLLKIAFPDTDFREARSAVSFANPVSTSTSTPSPRQVAVGKRQKPINEVEPDSGLAQKSLQRGSTHAGEDARVRVHVPQKESRLGSGSGITREQYQQDDSLLTHPGELVICKKKRKDREKSMVKPRTGSAGPVSPPSMGRNIRSPAAGSISKDSRLTQQTTHQQGWPNQPAHPANGGGGSVGWANPVKKLRTDAGKRRPSHL